RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 HIGD1BQ9P298 99 aa3.54□□□□□ -1.84
LRRC28-209ENST00000558861 SPINK6Q6UWN8 80 aa3.53□□□□□ -1.84
LRRC28-209ENST00000558861 MUSTN1Q8IVN3 82 aa3.53□□□□□ -1.84
LRRC28-209ENST00000558861 SMIM6P0DI80 62 aa3.52□□□□□ -1.85
LRRC28-209ENST00000558861 DDTP30046 118 aa3.52□□□□□ -1.85
LRRC28-209ENST00000558861 KRTAP12-2P59991 146 aa3.52□□□□□ -1.85
LRRC28-209ENST00000558861 SLC25A34Q6PIV7 304 aa3.52□□□□□ -1.85
LRRC28-209ENST00000558861 MIEN1Q9BRT3 115 aa3.52□□□□□ -1.85
LRRC28-209ENST00000558861 LRP2P98164 4655 aa3.51□□□□□ -1.85
LRRC28-209ENST00000558861 SEC61GP60059 68 aa3.51□□□□□ -1.85
LRRC28-209ENST00000558861 KRTAP10-8P60410 259 aa3.51□□□□□ -1.85
LRRC28-209ENST00000558861 KRTAP5-1Q6L8H4 278 aa3.51□□□□□ -1.85
LRRC28-209ENST00000558861 TRAV23DV6A0A075B6W5 121 aa3.5□□□□□ -1.85
LRRC28-209ENST00000558861 OXTP01178 125 aa3.5□□□□□ -1.85
LRRC28-209ENST00000558861 RPL28P46779 137 aaKnown RBP3.5□□□□□ -1.85
LRRC28-209ENST00000558861 PRLHP81277 87 aa3.5□□□□□ -1.85
LRRC28-209ENST00000558861 SMCR5Q8TEV8 140 aa3.5□□□□□ -1.85
LRRC28-209ENST00000558861 DIRC1Q969H9 104 aa3.5□□□□□ -1.85
LRRC28-209ENST00000558861 LINC01600Q96MT4 127 aa3.5□□□□□ -1.85
LRRC28-209ENST00000558861 Q9BRP9 147 aa3.5□□□□□ -1.85
LRRC28-209ENST00000558861 ZNF73O43830 326 aaPredicted RBP3.49□□□□□ -1.85
LRRC28-209ENST00000558861 ERC2-IT1O76042 136 aa3.49□□□□□ -1.85
LRRC28-209ENST00000558861 TAL2Q16559 108 aa3.49□□□□□ -1.85
LRRC28-209ENST00000558861 COPS9Q8WXC6 57 aa3.49□□□□□ -1.85
LRRC28-209ENST00000558861 UQCR10Q9UDW1 63 aa3.49□□□□□ -1.85
LRRC28-209ENST00000558861 PCP4L1A6NKN8 68 aa3.48□□□□□ -1.85
LRRC28-209ENST00000558861 FXYD2P54710 66 aa3.48□□□□□ -1.85
LRRC28-209ENST00000558861 S100A7L2Q5SY68 101 aa3.48□□□□□ -1.85
LRRC28-209ENST00000558861 Q6ZRX8 168 aa3.48□□□□□ -1.85
LRRC28-209ENST00000558861 FAM19A1Q7Z5A9 133 aa3.48□□□□□ -1.85
LRRC28-209ENST00000558861 TRAV13-2A0A0B4J235 113 aa3.47□□□□□ -1.85
LRRC28-209ENST00000558861 TRBV7-6A0A0J9YX20 115 aa3.47□□□□□ -1.85
LRRC28-209ENST00000558861 UBE2AP49459 152 aa3.47□□□□□ -1.85
LRRC28-209ENST00000558861 ELOF1P60002 83 aaKnown RBP3.47□□□□□ -1.85
LRRC28-209ENST00000558861 S100A12P80511 92 aa3.47□□□□□ -1.85
LRRC28-209ENST00000558861 HSD52Q0P140 79 aa3.47□□□□□ -1.85
LRRC28-209ENST00000558861 C6orf99Q4VX62 202 aa3.47□□□□□ -1.85
LRRC28-209ENST00000558861 KRTAP13-2Q52LG2 175 aa3.47□□□□□ -1.85
LRRC28-209ENST00000558861 SMIM11BQ8TCY0 68 aa3.47□□□□□ -1.85
LRRC28-209ENST00000558861 C12orf57Q99622 126 aa3.47□□□□□ -1.85
LRRC28-209ENST00000558861 PRO1933Q9H354 126 aa3.47□□□□□ -1.85
LRRC28-209ENST00000558861 A0A0B4J2C4 111 aa3.46□□□□□ -1.86
LRRC28-209ENST00000558861 ETDCA0A1B0GVM5 59 aa3.46□□□□□ -1.86
LRRC28-209ENST00000558861 LINC00483Q53H64 154 aa3.46□□□□□ -1.86
LRRC28-209ENST00000558861 OR13C6PQ8NH95 151 aa3.46□□□□□ -1.86
LRRC28-209ENST00000558861 SPRR4Q96PI1 79 aa3.46□□□□□ -1.86
LRRC28-209ENST00000558861 A6NDN8 102 aa3.45□□□□□ -1.86
LRRC28-209ENST00000558861 FAM229BQ4G0N7 80 aa3.45□□□□□ -1.86
LRRC28-209ENST00000558861 HIGD2AQ9BW72 106 aa3.45□□□□□ -1.86
LRRC28-209ENST00000558861 CBY1Q9Y3M2 126 aa3.45□□□□□ -1.86
LRRC28-209ENST00000558861 K7ERJ3 54 aa3.44□□□□□ -1.86
LRRC28-209ENST00000558861 SPRR1BP22528 89 aa3.44□□□□□ -1.86
LRRC28-209ENST00000558861 COX7BP24311 80 aa3.44□□□□□ -1.86
LRRC28-209ENST00000558861 BVES-AS1Q5T3Y7 98 aa3.44□□□□□ -1.86
LRRC28-209ENST00000558861 ST20-AS1Q8NBB2 130 aa3.44□□□□□ -1.86
LRRC28-209ENST00000558861 LPAP08519 4548 aa3.44□□□□□ -1.86
LRRC28-209ENST00000558861 IGLV5-48A0A075B6I7 105 aa3.42□□□□□ -1.86
LRRC28-209ENST00000558861 CRYGAP11844 174 aa3.42□□□□□ -1.86
LRRC28-209ENST00000558861 CTAG1AP78358 180 aa3.42□□□□□ -1.86
LRRC28-209ENST00000558861 LINC00575Q6W349 94 aa3.42□□□□□ -1.86
LRRC28-209ENST00000558861 C3orf22Q8N5N4 141 aa3.42□□□□□ -1.86
LRRC28-209ENST00000558861 PRO1854Q9UHT4 67 aa3.42□□□□□ -1.86
LRRC28-209ENST00000558861 NHP2Q9NX24 153 aaKnown RBP3.41□□□□□ -1.86
LRRC28-209ENST00000558861 TSTD3H0UI37 97 aa3.4□□□□□ -1.87
LRRC28-209ENST00000558861 TSPAN13O95857 204 aa3.4□□□□□ -1.87
LRRC28-209ENST00000558861 HINT1P49773 126 aaPredicted RBP3.4□□□□□ -1.87
LRRC28-209ENST00000558861 RAB37Q96AX2 223 aa3.4□□□□□ -1.87
LRRC28-209ENST00000558861 ZNF706Q9Y5V0 76 aaPredicted RBP3.4□□□□□ -1.87
LRRC28-209ENST00000558861 H7C2G1 150 aa3.39□□□□□ -1.87
LRRC28-209ENST00000558861 hADV29S1A0JD25 119 aa3.38□□□□□ -1.87
LRRC28-209ENST00000558861 M0R143 59 aa3.38□□□□□ -1.87
LRRC28-209ENST00000558861 KRTAP5-4Q6L8H1 288 aa3.38□□□□□ -1.87
LRRC28-209ENST00000558861 Q6ZQY7 126 aa3.38□□□□□ -1.87
LRRC28-209ENST00000558861 KRTAP4-4Q9BYR3 166 aa3.38□□□□□ -1.87
LRRC28-209ENST00000558861 TEX49A0A1B0GTD5 131 aa3.37□□□□□ -1.87
LRRC28-209ENST00000558861 A0A1B0GX51 115 aa3.37□□□□□ -1.87
LRRC28-209ENST00000558861 H0YGX0 51 aa3.37□□□□□ -1.87
LRRC28-209ENST00000558861 VAMP3Q15836 100 aa3.37□□□□□ -1.87
LRRC28-209ENST00000558861 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.37□□□□□ -1.87
LRRC28-209ENST00000558861 MOBPQ13875 183 aa3.36□□□□□ -1.87
LRRC28-209ENST00000558861 SSBP3-AS1Q7Z2R9 100 aa3.36□□□□□ -1.87
LRRC28-209ENST00000558861 CAMK2N1Q7Z7J9 78 aa3.36□□□□□ -1.87
LRRC28-209ENST00000558861 Q8N9L7 120 aa3.36□□□□□ -1.87
LRRC28-209ENST00000558861 LINC00304Q8N9R0 145 aa3.36□□□□□ -1.87
LRRC28-209ENST00000558861 CLEC2BQ92478 149 aa3.36□□□□□ -1.87
LRRC28-209ENST00000558861 SNHG12Q9BXW3 62 aa3.36□□□□□ -1.87
LRRC28-209ENST00000558861 MUC17Q685J3 4493 aa3.36□□□□□ -1.87
LRRC28-209ENST00000558861 LST1O00453 97 aa3.35□□□□□ -1.87
LRRC28-209ENST00000558861 TAX1BP3O14907 124 aa3.35□□□□□ -1.87
LRRC28-209ENST00000558861 SLC25A20O43772 301 aa3.35□□□□□ -1.87
LRRC28-209ENST00000558861 KRTAP5-9P26371 169 aa3.35□□□□□ -1.87
LRRC28-209ENST00000558861 DEFB105AQ8NG35 78 aa3.35□□□□□ -1.87
LRRC28-209ENST00000558861 PPDPFLQ8WWR9 84 aa3.35□□□□□ -1.87
LRRC28-209ENST00000558861 RNF213Q63HN8 5207 aa3.35□□□□□ -1.87
LRRC28-209ENST00000558861 NAA38Q9BRA0 125 aaKnown RBP3.34□□□□□ -1.87
LRRC28-209ENST00000558861 A0A0G2JQZ4 141 aa3.33□□□□□ -1.88
LRRC28-209ENST00000558861 TRACP01848 142 aa3.33□□□□□ -1.88
LRRC28-209ENST00000558861 RPS29P62273 56 aaKnown RBP3.33□□□□□ -1.88
LRRC28-209ENST00000558861 OCIAD2Q56VL3 154 aa3.33□□□□□ -1.88
LRRC28-209ENST00000558861 SPAG11AQ6PDA7 123 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms