RNA–Protein interactions for RNA: ENST00000558771.1

LRRC28-208, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-208ENST00000558771 DSCR10P59022 87 aa2.76□□□□□ -1.97
LRRC28-208ENST00000558771 Q1RN00 199 aa2.76□□□□□ -1.97
LRRC28-208ENST00000558771 KRTAP6-3Q3LI67 103 aa2.76□□□□□ -1.97
LRRC28-208ENST00000558771 SVBPQ8N300 66 aa2.76□□□□□ -1.97
LRRC28-208ENST00000558771 PRO1933Q9H354 126 aa2.76□□□□□ -1.97
LRRC28-208ENST00000558771 LINC00846Q9NV44 126 aa2.76□□□□□ -1.97
LRRC28-208ENST00000558771 A0A0G2JQZ4 141 aa2.75□□□□□ -1.97
LRRC28-208ENST00000558771 MYMXA0A1B0GTQ4 84 aa2.75□□□□□ -1.97
LRRC28-208ENST00000558771 A0A1B0GV90 55 aa2.75□□□□□ -1.97
LRRC28-208ENST00000558771 TMEM218A2RU14 115 aa2.75□□□□□ -1.97
LRRC28-208ENST00000558771 NDUFC2O95298 119 aa2.75□□□□□ -1.97
LRRC28-208ENST00000558771 KRTAP10-10P60014 251 aa2.75□□□□□ -1.97
LRRC28-208ENST00000558771 FABP9Q0Z7S8 132 aa2.75□□□□□ -1.97
LRRC28-208ENST00000558771 KRTAP19-6Q3LI70 58 aa2.75□□□□□ -1.97
LRRC28-208ENST00000558771 ATP11AUNQ6ZP68 121 aa2.75□□□□□ -1.97
LRRC28-208ENST00000558771 C14orf144Q96I85 54 aa2.75□□□□□ -1.97
LRRC28-208ENST00000558771 TRAV12-1A0A0B4J245 112 aa2.74□□□□□ -1.97
LRRC28-208ENST00000558771 HINT1P49773 126 aaPredicted RBP2.74□□□□□ -1.97
LRRC28-208ENST00000558771 TSPEAR-AS2P59090 65 aa2.74□□□□□ -1.97
LRRC28-208ENST00000558771 C18orf32Q8TCD1 76 aa2.74□□□□□ -1.97
LRRC28-208ENST00000558771 MIEN1Q9BRT3 115 aa2.74□□□□□ -1.97
LRRC28-208ENST00000558771 RPS10P5Q9NQ39 176 aa2.74□□□□□ -1.97
LRRC28-208ENST00000558771 TSTD3H0UI37 97 aa2.73□□□□□ -1.97
LRRC28-208ENST00000558771 APOC3P02656 99 aa2.73□□□□□ -1.97
LRRC28-208ENST00000558771 NPC2P61916 151 aa2.73□□□□□ -1.97
LRRC28-208ENST00000558771 TAL2Q16559 108 aa2.73□□□□□ -1.97
LRRC28-208ENST00000558771 COX19Q49B96 90 aa2.73□□□□□ -1.97
LRRC28-208ENST00000558771 SOSTDC1Q6X4U4 206 aa2.73□□□□□ -1.97
LRRC28-208ENST00000558771 DEFB105AQ8NG35 78 aa2.73□□□□□ -1.97
LRRC28-208ENST00000558771 SEC11CQ9BY50 192 aa2.73□□□□□ -1.97
LRRC28-208ENST00000558771 DHRS4-AS1Q9P1J3 65 aa2.73□□□□□ -1.97
LRRC28-208ENST00000558771 TRBV20-1A0A075B6N2 111 aa2.72□□□□□ -1.97
LRRC28-208ENST00000558771 TEX49A0A1B0GTD5 131 aa2.72□□□□□ -1.97
LRRC28-208ENST00000558771 LEPROTO15243 131 aa2.72□□□□□ -1.97
LRRC28-208ENST00000558771 TCL1BO95988 128 aa2.72□□□□□ -1.97
LRRC28-208ENST00000558771 PCP2Q8IVA1 136 aa2.72□□□□□ -1.97
LRRC28-208ENST00000558771 IFI27L1Q96BM0 104 aa2.72□□□□□ -1.97
LRRC28-208ENST00000558771 OBSCN-AS1Q96MR7 158 aa2.72□□□□□ -1.97
LRRC28-208ENST00000558771 COLCA2A8K830 154 aa2.71□□□□□ -1.98
LRRC28-208ENST00000558771 DLEU1O43261 78 aa2.71□□□□□ -1.98
LRRC28-208ENST00000558771 ELOF1P60002 83 aaKnown RBP2.71□□□□□ -1.98
LRRC28-208ENST00000558771 OR13C6PQ8NH95 151 aa2.71□□□□□ -1.98
LRRC28-208ENST00000558771 J3QQQ9 107 aa2.7□□□□□ -1.98
LRRC28-208ENST00000558771 COX7BP24311 80 aa2.7□□□□□ -1.98
LRRC28-208ENST00000558771 S100A2P29034 98 aa2.7□□□□□ -1.98
LRRC28-208ENST00000558771 RHEBQ15382 184 aa2.7□□□□□ -1.98
LRRC28-208ENST00000558771 PYY3Q5JQD4 70 aa2.7□□□□□ -1.98
LRRC28-208ENST00000558771 OCR1Q9BZK8 76 aa2.7□□□□□ -1.98
LRRC28-208ENST00000558771 NEBP20929 6669 aa2.7□□□□□ -1.98
LRRC28-208ENST00000558771 NMUP48645 174 aa2.69□□□□□ -1.98
LRRC28-208ENST00000558771 C6orf99Q4VX62 202 aa2.69□□□□□ -1.98
LRRC28-208ENST00000558771 C20orf166-AS1Q96NR2 134 aa2.69□□□□□ -1.98
LRRC28-208ENST00000558771 TRAPPC1Q9Y5R8 145 aa2.69□□□□□ -1.98
LRRC28-208ENST00000558771 IGLV5-48A0A075B6I7 105 aa2.68□□□□□ -1.98
LRRC28-208ENST00000558771 A0A0J9YXY3 114 aa2.68□□□□□ -1.98
LRRC28-208ENST00000558771 FAM236DA0A1B0GTK5 79 aa2.68□□□□□ -1.98
LRRC28-208ENST00000558771 M0R143 59 aa2.68□□□□□ -1.98
LRRC28-208ENST00000558771 FAM236CP0DP71 79 aa2.68□□□□□ -1.98
LRRC28-208ENST00000558771 LGALS3P17931 250 aaKnown RBP2.68□□□□□ -1.98
LRRC28-208ENST00000558771 SEC61GP60059 68 aa2.68□□□□□ -1.98
LRRC28-208ENST00000558771 VAMP3Q15836 100 aa2.68□□□□□ -1.98
LRRC28-208ENST00000558771 C5orf47Q569G3 176 aa2.68□□□□□ -1.98
LRRC28-208ENST00000558771 Q96NJ1 140 aa2.68□□□□□ -1.98
LRRC28-208ENST00000558771 SPANXCQ9NY87 97 aa2.68□□□□□ -1.98
LRRC28-208ENST00000558771 HERVK_113P61574 105 aa2.67□□□□□ -1.98
LRRC28-208ENST00000558771 KRTAP20-1Q3LI63 56 aa2.67□□□□□ -1.98
LRRC28-208ENST00000558771 CHCHD1Q96BP2 118 aaKnown RBP2.67□□□□□ -1.98
LRRC28-208ENST00000558771 SPANXDQ9BXN6 97 aa2.67□□□□□ -1.98
LRRC28-208ENST00000558771 A8MUU9 505 aa2.66□□□□□ -1.98
LRRC28-208ENST00000558771 IGFL1Q6UW32 110 aa2.66□□□□□ -1.98
LRRC28-208ENST00000558771 HIST3H2BBQ8N257 126 aa2.66□□□□□ -1.98
LRRC28-208ENST00000558771 LINC00308Q8TCZ7 52 aa2.66□□□□□ -1.98
LRRC28-208ENST00000558771 YPEL4Q96NS1 127 aa2.66□□□□□ -1.98
LRRC28-208ENST00000558771 MUC12Q9UKN1 5478 aa2.65□□□□□ -1.98
LRRC28-208ENST00000558771 TRBV7-6A0A0J9YX20 115 aa2.65□□□□□ -1.99
LRRC28-208ENST00000558771 TRBV7-7A0A0K0K1E9 115 aa2.65□□□□□ -1.99
LRRC28-208ENST00000558771 SCGB1A1P11684 91 aa2.65□□□□□ -1.99
LRRC28-208ENST00000558771 PLNP26678 52 aa2.65□□□□□ -1.99
LRRC28-208ENST00000558771 NDUFV3P56181 108 aaKnown RBP2.65□□□□□ -1.99
LRRC28-208ENST00000558771 COA6Q5JTJ3 125 aaKnown RBP2.65□□□□□ -1.99
LRRC28-208ENST00000558771 SNHG12Q9BXW3 62 aa2.65□□□□□ -1.99
LRRC28-208ENST00000558771 A0A1B0GWB2 263 aa2.64□□□□□ -1.99
LRRC28-208ENST00000558771 F8WEM9 126 aa2.64□□□□□ -1.99
LRRC28-208ENST00000558771 HSBP1O75506 76 aa2.64□□□□□ -1.99
LRRC28-208ENST00000558771 DPM2O94777 84 aa2.64□□□□□ -1.99
LRRC28-208ENST00000558771 IGKCP01834 107 aa2.64□□□□□ -1.99
LRRC28-208ENST00000558771 HRES1P13985 223 aa2.64□□□□□ -1.99
LRRC28-208ENST00000558771 PMCHL2Q9BQD1 86 aa2.64□□□□□ -1.99
LRRC28-208ENST00000558771 RBM12B-AS1Q9P1G2 102 aa2.64□□□□□ -1.99
LRRC28-208ENST00000558771 E9PLD3 99 aa2.63□□□□□ -1.99
LRRC28-208ENST00000558771 LST1O00453 97 aa2.63□□□□□ -1.99
LRRC28-208ENST00000558771 LEPROTL1O95214 131 aa2.63□□□□□ -1.99
LRRC28-208ENST00000558771 COL5A1-AS1Q5SY13 56 aa2.63□□□□□ -1.99
LRRC28-208ENST00000558771 CLEC2BQ92478 149 aa2.63□□□□□ -1.99
LRRC28-208ENST00000558771 HIST1H2BKO60814 126 aa2.62□□□□□ -1.99
LRRC28-208ENST00000558771 TIMM17BO60830 172 aa2.62□□□□□ -1.99
LRRC28-208ENST00000558771 HIST1H2BJP06899 126 aa2.62□□□□□ -1.99
LRRC28-208ENST00000558771 HIST1H2BOP23527 126 aa2.62□□□□□ -1.99
LRRC28-208ENST00000558771 HIST1H2BBP33778 126 aa2.62□□□□□ -1.99
LRRC28-208ENST00000558771 HIST1H2BDP58876 126 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms