RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 SMIM29Q86T20 159 aa7.99□□□□□ -1.13
SMAD3-207ENST00000558763 LINC00643Q86TS7 51 aa7.99□□□□□ -1.13
SMAD3-207ENST00000558763 SCGB1A1P11684 91 aa7.97□□□□□ -1.13
SMAD3-207ENST00000558763 PDE6GP18545 87 aa7.97□□□□□ -1.13
SMAD3-207ENST00000558763 TRBV7-7A0A0K0K1E9 115 aa7.97□□□□□ -1.13
SMAD3-207ENST00000558763 BCE1O60756 84 aa7.97□□□□□ -1.13
SMAD3-207ENST00000558763 Q6ZSA8 131 aa7.97□□□□□ -1.13
SMAD3-207ENST00000558763 HIGD2AQ9BW72 106 aa7.97□□□□□ -1.13
SMAD3-207ENST00000558763 SCXQ7RTU7 201 aa7.95□□□□□ -1.14
SMAD3-207ENST00000558763 Q6Q795 121 aa7.95□□□□□ -1.14
SMAD3-207ENST00000558763 CIRBP-AS1Q8TBR5 109 aa7.94□□□□□ -1.14
SMAD3-207ENST00000558763 APOBP04114 4563 aaKnown RBP7.93□□□□□ -1.14
SMAD3-207ENST00000558763 SPRR1BP22528 89 aa7.92□□□□□ -1.14
SMAD3-207ENST00000558763 Q6JHZ5 121 aa7.92□□□□□ -1.14
SMAD3-207ENST00000558763 PSORS1C2Q9UIG4 136 aa7.92□□□□□ -1.14
SMAD3-207ENST00000558763 UBE2AP49459 152 aa7.91□□□□□ -1.14
SMAD3-207ENST00000558763 A0A1W2PNM2 257 aa7.9□□□□□ -1.15
SMAD3-207ENST00000558763 IMUPQ9GZP8 106 aa7.9□□□□□ -1.15
SMAD3-207ENST00000558763 IGLV8-61A0A075B6I0 122 aa7.89□□□□□ -1.15
SMAD3-207ENST00000558763 C1orf137Q5JT78 98 aa7.89□□□□□ -1.15
SMAD3-207ENST00000558763 IGKV3D-7A0A0C4DH55 119 aa7.88□□□□□ -1.15
SMAD3-207ENST00000558763 Q6ZVQ6 151 aa7.88□□□□□ -1.15
SMAD3-207ENST00000558763 UBL5Q9BZL1 73 aa7.87□□□□□ -1.15
SMAD3-207ENST00000558763 Q8NBF4 154 aa7.86□□□□□ -1.15
SMAD3-207ENST00000558763 A0A0G2JQZ4 141 aa7.86□□□□□ -1.15
SMAD3-207ENST00000558763 ATP5EP2Q5VTU8 51 aa7.85□□□□□ -1.15
SMAD3-207ENST00000558763 IGFL1Q6UW32 110 aa7.85□□□□□ -1.15
SMAD3-207ENST00000558763 SPRR4Q96PI1 79 aa7.85□□□□□ -1.15
SMAD3-207ENST00000558763 VPS13BQ7Z7G8 4022 aa7.84□□□□□ -1.15
SMAD3-207ENST00000558763 SMR3BP02814 79 aaPredicted RBP7.84□□□□□ -1.15
SMAD3-207ENST00000558763 ZNF861PO60384 105 aa7.83□□□□□ -1.16
SMAD3-207ENST00000558763 LINC00483Q53H64 154 aa7.83□□□□□ -1.16
SMAD3-207ENST00000558763 HSPG2P98160 4391 aa7.82□□□□□ -1.16
SMAD3-207ENST00000558763 F8WEM9 126 aa7.82□□□□□ -1.16
SMAD3-207ENST00000558763 A0A1B0GW54 56 aa7.82□□□□□ -1.16
SMAD3-207ENST00000558763 A0A087WVE0 104 aa7.81□□□□□ -1.16
SMAD3-207ENST00000558763 CDK2AP2O75956 126 aa7.81□□□□□ -1.16
SMAD3-207ENST00000558763 HIST1H4AP62805 103 aaKnown RBP7.81□□□□□ -1.16
SMAD3-207ENST00000558763 KIAA1109Q2LD37 5005 aa7.81□□□□□ -1.16
SMAD3-207ENST00000558763 FAM236AA0A1B0GUQ0 79 aa7.8□□□□□ -1.16
SMAD3-207ENST00000558763 FAM236BA0A1B0GV22 79 aa7.8□□□□□ -1.16
SMAD3-207ENST00000558763 IGLV7-43P04211 117 aa7.8□□□□□ -1.16
SMAD3-207ENST00000558763 CRYGAP11844 174 aa7.8□□□□□ -1.16
SMAD3-207ENST00000558763 FAT1Q14517 4588 aa7.79□□□□□ -1.16
SMAD3-207ENST00000558763 CXCL6P80162 114 aa7.79□□□□□ -1.16
SMAD3-207ENST00000558763 RYR1P21817 5038 aa7.78□□□□□ -1.16
SMAD3-207ENST00000558763 NREPQ16612 68 aa7.75□□□□□ -1.17
SMAD3-207ENST00000558763 ZNF706Q9Y5V0 76 aaPredicted RBP7.75□□□□□ -1.17
SMAD3-207ENST00000558763 RPL37AP61513 92 aaKnown RBP7.75□□□□□ -1.17
SMAD3-207ENST00000558763 ANAPC13Q9BS18 74 aa7.74□□□□□ -1.17
SMAD3-207ENST00000558763 ANAPC11Q9NYG5 84 aa7.74□□□□□ -1.17
SMAD3-207ENST00000558763 BIRC6Q9NR09 4857 aa7.73□□□□□ -1.17
SMAD3-207ENST00000558763 A0A087WSZ3 146 aa7.71□□□□□ -1.17
SMAD3-207ENST00000558763 IGLV9-49A0A0B4J1Y8 123 aa7.71□□□□□ -1.17
SMAD3-207ENST00000558763 FAM229AH3BQW9 127 aa7.71□□□□□ -1.18
SMAD3-207ENST00000558763 Q8N9L7 120 aa7.71□□□□□ -1.18
SMAD3-207ENST00000558763 IGKV4-1P06312 121 aa7.7□□□□□ -1.18
SMAD3-207ENST00000558763 Q5VSD8 79 aa7.7□□□□□ -1.18
SMAD3-207ENST00000558763 KRTAP17-1Q9BYP8 105 aa7.7□□□□□ -1.18
SMAD3-207ENST00000558763 BPY2O14599 106 aa7.7□□□□□ -1.18
SMAD3-207ENST00000558763 DSCR10P59022 87 aa7.68□□□□□ -1.18
SMAD3-207ENST00000558763 KRTAP10-4P60372 401 aaPredicted RBP7.68□□□□□ -1.18
SMAD3-207ENST00000558763 C9orf153Q5TBE3 101 aa7.68□□□□□ -1.18
SMAD3-207ENST00000558763 PLA2G1BP04054 148 aaKnown RBP7.68□□□□□ -1.18
SMAD3-207ENST00000558763 MOBPQ13875 183 aa7.68□□□□□ -1.18
SMAD3-207ENST00000558763 ATOX1O00244 68 aa7.66□□□□□ -1.18
SMAD3-207ENST00000558763 Q8N1X5 172 aa7.66□□□□□ -1.18
SMAD3-207ENST00000558763 CCDC179H3BU77 68 aa7.64□□□□□ -1.19
SMAD3-207ENST00000558763 LINC00472Q9H8W2 130 aa7.64□□□□□ -1.19
SMAD3-207ENST00000558763 KRTAP1-4P0C5Y4 121 aa7.64□□□□□ -1.19
SMAD3-207ENST00000558763 A0A087X002 238 aa7.62□□□□□ -1.19
SMAD3-207ENST00000558763 K7EQZ3 153 aa7.62□□□□□ -1.19
SMAD3-207ENST00000558763 DEFB116Q30KQ4 102 aa7.62□□□□□ -1.19
SMAD3-207ENST00000558763 KRTAP13-2Q52LG2 175 aa7.62□□□□□ -1.19
SMAD3-207ENST00000558763 Q96NJ1 140 aa7.62□□□□□ -1.19
SMAD3-207ENST00000558763 SPINK6Q6UWN8 80 aa7.6□□□□□ -1.19
SMAD3-207ENST00000558763 HERC2O95714 4834 aa7.59□□□□□ -1.19
SMAD3-207ENST00000558763 PKHD1L1Q86WI1 4243 aa7.59□□□□□ -1.19
SMAD3-207ENST00000558763 HRCT1Q6UXD1 115 aa7.59□□□□□ -1.19
SMAD3-207ENST00000558763 COX7CP15954 63 aa7.59□□□□□ -1.2
SMAD3-207ENST00000558763 FAM229BQ4G0N7 80 aa7.59□□□□□ -1.2
SMAD3-207ENST00000558763 SERP2Q8N6R1 65 aa7.59□□□□□ -1.2
SMAD3-207ENST00000558763 KRTAP4-5Q9BYR2 181 aa7.58□□□□□ -1.2
SMAD3-207ENST00000558763 UQCRQO14949 82 aa7.57□□□□□ -1.2
SMAD3-207ENST00000558763 SSBP3-AS1Q7Z2R9 100 aa7.57□□□□□ -1.2
SMAD3-207ENST00000558763 CD164Q04900 197 aa7.54□□□□□ -1.2
SMAD3-207ENST00000558763 A8MWP4 228 aa7.53□□□□□ -1.2
SMAD3-207ENST00000558763 PRR15Q8IV56 129 aa7.53□□□□□ -1.2
SMAD3-207ENST00000558763 SS18L2Q9UHA2 77 aa7.53□□□□□ -1.2
SMAD3-207ENST00000558763 TRAV7A0A075B6U4 112 aa7.52□□□□□ -1.21
SMAD3-207ENST00000558763 OCR1Q9BZK8 76 aa7.52□□□□□ -1.21
SMAD3-207ENST00000558763 MYCBP2O75592 4640 aa7.52□□□□□ -1.21
SMAD3-207ENST00000558763 FLG2Q5D862 2391 aaPredicted RBP7.51□□□□□ -1.21
SMAD3-207ENST00000558763 HCG22E2RYF7 251 aa7.51□□□□□ -1.21
SMAD3-207ENST00000558763 CYSTM1Q9H1C7 97 aa7.51□□□□□ -1.21
SMAD3-207ENST00000558763 ABCA13Q86UQ4 5058 aa7.51□□□□□ -1.21
SMAD3-207ENST00000558763 J3KT08 172 aa7.5□□□□□ -1.21
SMAD3-207ENST00000558763 LRP1Q07954 4544 aaKnown RBP7.5□□□□□ -1.21
SMAD3-207ENST00000558763 KRTAP29-1A8MX34 341 aaPredicted RBP7.5□□□□□ -1.21
SMAD3-207ENST00000558763 SMIM20Q8N5G0 67 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms