RNA–Protein interactions for RNA: ENST00000558300.1

TMOD3-202, Transcript of tropomodulin 3, humanhuman

TSL 2

Gene TMOD3, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-202ENST00000558300 CNOT1A5YKK6 2376 aaKnown RBP0.3□□□□□ -2.36
TMOD3-202ENST00000558300 EP300Q09472 2414 aaPredicted RBP0.29□□□□□ -2.36
TMOD3-202ENST00000558300 KIAA0586Q9BVV6 1533 aa0.29□□□□□ -2.36
TMOD3-202ENST00000558300 CHD8Q9HCK8 2581 aa0.29□□□□□ -2.36
TMOD3-202ENST00000558300 CELSR1Q9NYQ6 3014 aa0.29□□□□□ -2.36
TMOD3-202ENST00000558300 CSPG4Q6UVK1 2322 aa0.29□□□□□ -2.36
TMOD3-202ENST00000558300 NESP48681 1621 aa0.29□□□□□ -2.36
TMOD3-202ENST00000558300 CICQ96RK0 1608 aaPredicted RBP0.29□□□□□ -2.36
TMOD3-202ENST00000558300 ZNF831Q5JPB2 1677 aa0.29□□□□□ -2.36
TMOD3-202ENST00000558300 KMT2DO14686 5537 aa0.29□□□□□ -2.36
TMOD3-202ENST00000558300 CD163L1Q9NR16 1453 aa0.29□□□□□ -2.36
TMOD3-202ENST00000558300 CPS1P31327 1500 aa0.28□□□□□ -2.36
TMOD3-202ENST00000558300 DEPDC5O75140 1603 aa0.28□□□□□ -2.36
TMOD3-202ENST00000558300 H0YGX0 51 aa0.28□□□□□ -2.36
TMOD3-202ENST00000558300 WT1-ASQ06250 92 aa0.28□□□□□ -2.36
TMOD3-202ENST00000558300 SPRR2GQ9BYE4 73 aa0.28□□□□□ -2.36
TMOD3-202ENST00000558300 EEA1Q15075 1411 aa0.28□□□□□ -2.37
TMOD3-202ENST00000558300 ERICH3Q5RHP9 1530 aa0.28□□□□□ -2.37
TMOD3-202ENST00000558300 MROH1Q8NDA8 1641 aa0.27□□□□□ -2.37
TMOD3-202ENST00000558300 PLCH1Q4KWH8 1693 aa0.27□□□□□ -2.37
TMOD3-202ENST00000558300 DDX60LQ5H9U9 1706 aaKnown RBP0.27□□□□□ -2.37
TMOD3-202ENST00000558300 SMIM27A0A1W2PRY6 76 aa0.27□□□□□ -2.37
TMOD3-202ENST00000558300 NOP10Q9NPE3 64 aaKnown RBP0.27□□□□□ -2.37
TMOD3-202ENST00000558300 REV3LO60673 3130 aa0.27□□□□□ -2.37
TMOD3-202ENST00000558300 SPRR2DP22532 72 aa0.26□□□□□ -2.37
TMOD3-202ENST00000558300 PLNP26678 52 aa0.26□□□□□ -2.37
TMOD3-202ENST00000558300 MACF1Q9UPN3 7388 aaKnown RBP0.26□□□□□ -2.37
TMOD3-202ENST00000558300 ABCA9Q8IUA7 1624 aa0.26□□□□□ -2.37
TMOD3-202ENST00000558300 EIF2AK4Q9P2K8 1649 aaKnown RBP0.26□□□□□ -2.37
TMOD3-202ENST00000558300 PKD1L1Q8TDX9 2849 aa0.25□□□□□ -2.37
TMOD3-202ENST00000558300 C4AP0C0L4 1744 aa0.25□□□□□ -2.37
TMOD3-202ENST00000558300 C4BP0C0L5 1744 aa0.25□□□□□ -2.37
TMOD3-202ENST00000558300 C9orf92A6NGG3 77 aa0.25□□□□□ -2.37
TMOD3-202ENST00000558300 LINC00308Q8TCZ7 52 aa0.25□□□□□ -2.37
TMOD3-202ENST00000558300 S4R3F8 94 aa0.25□□□□□ -2.37
TMOD3-202ENST00000558300 LRRIQ1Q96JM4 1722 aa0.24□□□□□ -2.37
TMOD3-202ENST00000558300 MADDQ8WXG6 1647 aa0.24□□□□□ -2.37
TMOD3-202ENST00000558300 ZC3H13Q5T200 1668 aaKnown RBP0.24□□□□□ -2.37
TMOD3-202ENST00000558300 PLXNC1O60486 1568 aa0.23□□□□□ -2.37
TMOD3-202ENST00000558300 HMCN2Q8NDA2 5059 aa0.23□□□□□ -2.37
TMOD3-202ENST00000558300 RPS27P42677 84 aaKnown RBP0.23□□□□□ -2.37
TMOD3-202ENST00000558300 RPS27LQ71UM5 84 aaKnown RBP0.23□□□□□ -2.37
TMOD3-202ENST00000558300 WFDC10BQ8IUB3 73 aa0.23□□□□□ -2.37
TMOD3-202ENST00000558300 KAAG1Q9UBP8 84 aa0.23□□□□□ -2.37
TMOD3-202ENST00000558300 NRAPQ86VF7 1730 aa0.23□□□□□ -2.37
TMOD3-202ENST00000558300 NHSQ6T4R5 1651 aa0.23□□□□□ -2.37
TMOD3-202ENST00000558300 CCDC180Q9P1Z9 1646 aa0.23□□□□□ -2.37
TMOD3-202ENST00000558300 INO80Q9ULG1 1556 aaPredicted RBP0.23□□□□□ -2.37
TMOD3-202ENST00000558300 PRXQ9BXM0 1461 aa0.22□□□□□ -2.37
TMOD3-202ENST00000558300 DEFB110Q30KQ9 67 aa0.22□□□□□ -2.37
TMOD3-202ENST00000558300 UGGT1Q9NYU2 1555 aa0.21□□□□□ -2.38
TMOD3-202ENST00000558300 ABCA10Q8WWZ4 1543 aa0.21□□□□□ -2.38
TMOD3-202ENST00000558300 ITSN1Q15811 1721 aa0.21□□□□□ -2.38
TMOD3-202ENST00000558300 WIZO95785 1651 aa0.21□□□□□ -2.38
TMOD3-202ENST00000558300 FLNCQ14315 2725 aa0.2□□□□□ -2.38
TMOD3-202ENST00000558300 MAP1BP46821 2468 aaKnown RBP0.2□□□□□ -2.38
TMOD3-202ENST00000558300 SPRR2BP35325 72 aa0.2□□□□□ -2.38
TMOD3-202ENST00000558300 CMC2Q9NRP2 79 aa0.2□□□□□ -2.38
TMOD3-202ENST00000558300 PDE4DIPQ5VU43 2346 aa0.19□□□□□ -2.38
TMOD3-202ENST00000558300 KNL1Q8NG31 2342 aa0.19□□□□□ -2.38
TMOD3-202ENST00000558300 IGIPA6NJ69 53 aa0.19□□□□□ -2.38
TMOD3-202ENST00000558300 M0QY20 66 aa0.19□□□□□ -2.38
TMOD3-202ENST00000558300 TRANK1O15050 2925 aa0.18□□□□□ -2.38
TMOD3-202ENST00000558300 ABCA6Q8N139 1617 aa0.18□□□□□ -2.38
TMOD3-202ENST00000558300 IGLV5-48A0A075B6I7 105 aa0.18□□□□□ -2.38
TMOD3-202ENST00000558300 MMP24-AS1A0A0U1RRL7 71 aa0.18□□□□□ -2.38
TMOD3-202ENST00000558300 WNK1Q9H4A3 2382 aa0.18□□□□□ -2.38
TMOD3-202ENST00000558300 EFCAB6Q5THR3 1501 aa0.18□□□□□ -2.38
TMOD3-202ENST00000558300 COL7A1Q02388 2944 aa0.17□□□□□ -2.38
TMOD3-202ENST00000558300 TIAM1Q13009 1591 aa0.17□□□□□ -2.38
TMOD3-202ENST00000558300 SETXQ7Z333 2677 aaKnown RBP0.17□□□□□ -2.38
TMOD3-202ENST00000558300 APC2O95996 2303 aa0.16□□□□□ -2.38
TMOD3-202ENST00000558300 HECTD4Q9Y4D8 3996 aa0.16□□□□□ -2.38
TMOD3-202ENST00000558300 CREBBPQ92793 2442 aa0.16□□□□□ -2.38
TMOD3-202ENST00000558300 HECTD1Q9ULT8 2610 aa0.16□□□□□ -2.38
TMOD3-202ENST00000558300 C3P01024 1663 aa0.16□□□□□ -2.38
TMOD3-202ENST00000558300 PCNX1Q96RV3 2341 aa0.16□□□□□ -2.38
TMOD3-202ENST00000558300 TJP1Q07157 1748 aa0.16□□□□□ -2.38
TMOD3-202ENST00000558300 HSPG2P98160 4391 aa0.15□□□□□ -2.39
TMOD3-202ENST00000558300 TNP1P09430 55 aa0.15□□□□□ -2.39
TMOD3-202ENST00000558300 AKAP13Q12802 2813 aa0.15□□□□□ -2.39
TMOD3-202ENST00000558300 KIF1AQ12756 1690 aa0.14□□□□□ -2.39
TMOD3-202ENST00000558300 FLNBO75369 2602 aaKnown RBP0.14□□□□□ -2.39
TMOD3-202ENST00000558300 SNRPGP15A8MWD9 76 aa0.14□□□□□ -2.39
TMOD3-202ENST00000558300 TFF3Q07654 80 aa0.14□□□□□ -2.39
TMOD3-202ENST00000558300 NSD1Q96L73 2696 aaPredicted RBP0.14□□□□□ -2.39
TMOD3-202ENST00000558300 GLI2P10070 1586 aa0.14□□□□□ -2.39
TMOD3-202ENST00000558300 SSPOA2VEC9 5147 aa0.14□□□□□ -2.39
TMOD3-202ENST00000558300 FLNAP21333 2647 aaKnown RBP0.14□□□□□ -2.39
TMOD3-202ENST00000558300 RNF17Q9BXT8 1623 aaKnown RBP0.13□□□□□ -2.39
TMOD3-202ENST00000558300 PARP4Q9UKK3 1724 aaKnown RBP0.13□□□□□ -2.39
TMOD3-202ENST00000558300 ACANP16112 2415 aa0.13□□□□□ -2.39
TMOD3-202ENST00000558300 LRP2P98164 4655 aa0.13□□□□□ -2.39
TMOD3-202ENST00000558300 MAP1AP78559 2803 aaPredicted RBP0.13□□□□□ -2.39
TMOD3-202ENST00000558300 SPRR2AP35326 72 aa0.13□□□□□ -2.39
TMOD3-202ENST00000558300 CLPSL2Q6UWE3 100 aa0.13□□□□□ -2.39
TMOD3-202ENST00000558300 SMIM2Q9BVW6 85 aa0.13□□□□□ -2.39
TMOD3-202ENST00000558300 CLASP1Q7Z460 1538 aa0.13□□□□□ -2.39
TMOD3-202ENST00000558300 ANKRD36CQ5JPF3 1778 aa0.12□□□□□ -2.39
TMOD3-202ENST00000558300 SPART-AS1P0CW21 52 aa0.12□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms