RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 APELAP0DMC3 54 aa2.19□□□□□ -2.06
LRRC28-205ENST00000558248 TPRXLQ17RH7 258 aa2.19□□□□□ -2.06
LRRC28-205ENST00000558248 XAF1Q6GPH4 301 aa2.19□□□□□ -2.06
LRRC28-205ENST00000558248 CACFD1Q9UGQ2 172 aa2.19□□□□□ -2.06
LRRC28-205ENST00000558248 LRP1Q07954 4544 aaKnown RBP2.18□□□□□ -2.06
LRRC28-205ENST00000558248 CRYM-AS1A6NIL9 109 aa2.18□□□□□ -2.06
LRRC28-205ENST00000558248 MT1HL1P0DM35 61 aa2.18□□□□□ -2.06
LRRC28-205ENST00000558248 SMCO4Q9NRQ5 59 aa2.18□□□□□ -2.06
LRRC28-205ENST00000558248 FAM223BA6NKX1 122 aa2.17□□□□□ -2.06
LRRC28-205ENST00000558248 H3BRN7 92 aa2.17□□□□□ -2.06
LRRC28-205ENST00000558248 MRPS14O60783 128 aaKnown RBP2.17□□□□□ -2.06
LRRC28-205ENST00000558248 HTN3P15516 51 aa2.17□□□□□ -2.06
LRRC28-205ENST00000558248 KRTAP10-4P60372 401 aaPredicted RBP2.17□□□□□ -2.06
LRRC28-205ENST00000558248 Q6ZRN7 208 aaPredicted RBP2.17□□□□□ -2.06
LRRC28-205ENST00000558248 FAM223AQ8IWN6 122 aa2.17□□□□□ -2.06
LRRC28-205ENST00000558248 ST20Q9HBF5 79 aa2.17□□□□□ -2.06
LRRC28-205ENST00000558248 NXT2Q9NPJ8 142 aaKnown RBP2.17□□□□□ -2.06
LRRC28-205ENST00000558248 TRBV7-3A0A075B6L6 115 aa2.16□□□□□ -2.06
LRRC28-205ENST00000558248 TRGV4A0A0C4DH28 118 aa2.16□□□□□ -2.06
LRRC28-205ENST00000558248 TRBV6-4A0A1B0GX49 114 aa2.16□□□□□ -2.06
LRRC28-205ENST00000558248 A0A1W2PNN7 141 aa2.16□□□□□ -2.06
LRRC28-205ENST00000558248 PDCD5O14737 125 aa2.16□□□□□ -2.06
LRRC28-205ENST00000558248 APOC3P02656 99 aa2.16□□□□□ -2.06
LRRC28-205ENST00000558248 SPART-AS1P0CW21 52 aa2.16□□□□□ -2.06
LRRC28-205ENST00000558248 SAA2P0DJI9 122 aaPredicted RBP2.16□□□□□ -2.06
LRRC28-205ENST00000558248 CCL18P55774 89 aa2.16□□□□□ -2.06
LRRC28-205ENST00000558248 LINC00315P59091 139 aa2.16□□□□□ -2.06
LRRC28-205ENST00000558248 RPL39P5Q59GN2 51 aa2.16□□□□□ -2.06
LRRC28-205ENST00000558248 TVP23CQ96ET8 276 aa2.16□□□□□ -2.06
LRRC28-205ENST00000558248 FAM167A-AS1Q96KT0 104 aa2.16□□□□□ -2.06
LRRC28-205ENST00000558248 MANBALQ9NQG1 85 aa2.16□□□□□ -2.06
LRRC28-205ENST00000558248 KLK9Q9UKQ9 250 aa2.16□□□□□ -2.06
LRRC28-205ENST00000558248 MUC2Q02817 5179 aa2.16□□□□□ -2.06
LRRC28-205ENST00000558248 FAT4Q6V0I7 4981 aa2.16□□□□□ -2.06
LRRC28-205ENST00000558248 FSIP2Q5CZC0 6907 aa2.15□□□□□ -2.06
LRRC28-205ENST00000558248 IGKV3-7A0A075B6H7 116 aa2.15□□□□□ -2.07
LRRC28-205ENST00000558248 A0A087WTM6 91 aa2.15□□□□□ -2.07
LRRC28-205ENST00000558248 SDHAF1A6NFY7 115 aa2.15□□□□□ -2.07
LRRC28-205ENST00000558248 HIGD1CA8MV81 97 aa2.15□□□□□ -2.07
LRRC28-205ENST00000558248 SYS1-DBNDD2H3BUS1 97 aa2.15□□□□□ -2.07
LRRC28-205ENST00000558248 BCE1O60756 84 aa2.15□□□□□ -2.07
LRRC28-205ENST00000558248 PIGYQ3MUY2 71 aa2.15□□□□□ -2.07
LRRC28-205ENST00000558248 SPACA4Q8TDM5 124 aa2.15□□□□□ -2.07
LRRC28-205ENST00000558248 ODF3Q96PU9 254 aa2.15□□□□□ -2.07
LRRC28-205ENST00000558248 LIMD2Q9BT23 127 aa2.15□□□□□ -2.07
LRRC28-205ENST00000558248 TMEM14BQ9NUH8 114 aa2.15□□□□□ -2.07
LRRC28-205ENST00000558248 SPCS1Q9Y6A9 102 aa2.15□□□□□ -2.07
LRRC28-205ENST00000558248 TRAV1-2A0A0B4J238 106 aa2.14□□□□□ -2.07
LRRC28-205ENST00000558248 PDE6GP18545 87 aa2.14□□□□□ -2.07
LRRC28-205ENST00000558248 UBE2D1P51668 147 aa2.14□□□□□ -2.07
LRRC28-205ENST00000558248 DEFB131AP59861 70 aa2.14□□□□□ -2.07
LRRC28-205ENST00000558248 C10orf55Q5SWW7 151 aa2.14□□□□□ -2.07
LRRC28-205ENST00000558248 IGFL1Q6UW32 110 aa2.14□□□□□ -2.07
LRRC28-205ENST00000558248 CYP2G1PQ6ZSU1 146 aa2.14□□□□□ -2.07
LRRC28-205ENST00000558248 PRO1854Q9UHT4 67 aa2.14□□□□□ -2.07
LRRC28-205ENST00000558248 TEX49A0A1B0GTD5 131 aa2.13□□□□□ -2.07
LRRC28-205ENST00000558248 KANTRA0A1W2PQU2 76 aa2.13□□□□□ -2.07
LRRC28-205ENST00000558248 JMJD7-PLA2G4BH0Y9G9 81 aa2.13□□□□□ -2.07
LRRC28-205ENST00000558248 PPYP01298 95 aa2.13□□□□□ -2.07
LRRC28-205ENST00000558248 COX6CP09669 75 aa2.13□□□□□ -2.07
LRRC28-205ENST00000558248 ETDBQ3ZM63 59 aa2.13□□□□□ -2.07
LRRC28-205ENST00000558248 NMSQ5H8A3 153 aa2.13□□□□□ -2.07
LRRC28-205ENST00000558248 C6orf201Q7Z4U5 140 aa2.13□□□□□ -2.07
LRRC28-205ENST00000558248 ARHGAP5-AS1Q96IT6 56 aa2.13□□□□□ -2.07
LRRC28-205ENST00000558248 TMEM14CQ9P0S9 112 aa2.13□□□□□ -2.07
LRRC28-205ENST00000558248 ABRACLQ9P1F3 81 aa2.13□□□□□ -2.07
LRRC28-205ENST00000558248 A0A1W2PPM0 123 aa2.12□□□□□ -2.07
LRRC28-205ENST00000558248 TMEM14DPA8MWL7 114 aa2.12□□□□□ -2.07
LRRC28-205ENST00000558248 CHKB-CPT1BH3BT56 60 aa2.12□□□□□ -2.07
LRRC28-205ENST00000558248 ELOF1P60002 83 aaKnown RBP2.12□□□□□ -2.07
LRRC28-205ENST00000558248 UBE2D3P61077 147 aa2.12□□□□□ -2.07
LRRC28-205ENST00000558248 UBE2D2P62837 147 aa2.12□□□□□ -2.07
LRRC28-205ENST00000558248 LCE1CQ5T751 118 aa2.12□□□□□ -2.07
LRRC28-205ENST00000558248 LCE1BQ5T7P3 118 aa2.12□□□□□ -2.07
LRRC28-205ENST00000558248 RHPN1-AS1Q9BWJ2 59 aa2.12□□□□□ -2.07
LRRC28-205ENST00000558248 FAT3Q8TDW7 4589 aa2.11□□□□□ -2.07
LRRC28-205ENST00000558248 PKHD1L1Q86WI1 4243 aa2.11□□□□□ -2.07
LRRC28-205ENST00000558248 TRAV22A0A0B4J277 110 aa2.11□□□□□ -2.07
LRRC28-205ENST00000558248 H7BZZ5 65 aa2.11□□□□□ -2.07
LRRC28-205ENST00000558248 RNASE3P12724 160 aaKnown RBP2.11□□□□□ -2.07
LRRC28-205ENST00000558248 SSBP1Q04837 148 aaKnown RBP2.11□□□□□ -2.07
LRRC28-205ENST00000558248 WFDC2Q14508 124 aa2.11□□□□□ -2.07
LRRC28-205ENST00000558248 KLK9Q2XQG4 91 aa2.11□□□□□ -2.07
LRRC28-205ENST00000558248 LINC00304Q8N9R0 145 aa2.11□□□□□ -2.07
LRRC28-205ENST00000558248 PPP1R1CQ8WVI7 109 aa2.11□□□□□ -2.07
LRRC28-205ENST00000558248 NDUFA4O00483 81 aa2.1□□□□□ -2.07
LRRC28-205ENST00000558248 ACYP1P07311 99 aa2.1□□□□□ -2.07
LRRC28-205ENST00000558248 IGLC2P0DOY2 106 aa2.1□□□□□ -2.07
LRRC28-205ENST00000558248 IGLC3P0DOY3 106 aa2.1□□□□□ -2.07
LRRC28-205ENST00000558248 FXYD4P59646 89 aa2.1□□□□□ -2.07
LRRC28-205ENST00000558248 ZNF56Q15929 161 aa2.1□□□□□ -2.07
LRRC28-205ENST00000558248 Q6ZSA8 131 aa2.1□□□□□ -2.07
LRRC28-205ENST00000558248 COA5Q86WW8 74 aa2.1□□□□□ -2.07
LRRC28-205ENST00000558248 LINC01600Q96MT4 127 aa2.1□□□□□ -2.07
LRRC28-205ENST00000558248 TXNDC17Q9BRA2 123 aa2.1□□□□□ -2.07
LRRC28-205ENST00000558248 INE1O15225 51 aa2.09□□□□□ -2.07
LRRC28-205ENST00000558248 DEFB130BP0DP73 79 aa2.09□□□□□ -2.07
LRRC28-205ENST00000558248 DEFB130AP0DP74 79 aa2.09□□□□□ -2.07
LRRC28-205ENST00000558248 KLKP1Q107X0 134 aa2.09□□□□□ -2.07
LRRC28-205ENST00000558248 HMGN3Q15651 99 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms