RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 DNAL4O96015 105 aa12.46□□□□□ -0.41
CASC4-204ENST00000557945 H3BUT2 72 aa12.45□□□□□ -0.42
CASC4-204ENST00000557945 TAX1BP3O14907 124 aa12.45□□□□□ -0.42
CASC4-204ENST00000557945 OCIAD2Q56VL3 154 aa12.45□□□□□ -0.42
CASC4-204ENST00000557945 SMIM29Q86T20 159 aa12.44□□□□□ -0.42
CASC4-204ENST00000557945 C9orf118A6NHY6 69 aa12.43□□□□□ -0.42
CASC4-204ENST00000557945 Q8NBF4 154 aa12.43□□□□□ -0.42
CASC4-204ENST00000557945 LST1O00453 97 aa12.42□□□□□ -0.42
CASC4-204ENST00000557945 COL5A1-AS1Q5SY13 56 aa12.42□□□□□ -0.42
CASC4-204ENST00000557945 LYRM7Q5U5X0 104 aa12.42□□□□□ -0.42
CASC4-204ENST00000557945 SSBP3-AS1Q7Z2R9 100 aa12.42□□□□□ -0.42
CASC4-204ENST00000557945 PPDPFLQ8WWR9 84 aa12.42□□□□□ -0.42
CASC4-204ENST00000557945 GHRHP01286 108 aa12.41□□□□□ -0.42
CASC4-204ENST00000557945 LINC00304Q8N9R0 145 aa12.41□□□□□ -0.42
CASC4-204ENST00000557945 F8WEM9 126 aa12.4□□□□□ -0.42
CASC4-204ENST00000557945 TRACP01848 142 aa12.4□□□□□ -0.42
CASC4-204ENST00000557945 ATXN8Q156A1 80 aa12.39□□□□□ -0.43
CASC4-204ENST00000557945 ORMDL1Q9P0S3 153 aa12.39□□□□□ -0.43
CASC4-204ENST00000557945 TCL1BO95988 128 aa12.38□□□□□ -0.43
CASC4-204ENST00000557945 FABP2P12104 132 aa12.38□□□□□ -0.43
CASC4-204ENST00000557945 C4orf48Q5BLP8 95 aa12.37□□□□□ -0.43
CASC4-204ENST00000557945 A0A1W2PPM0 123 aa12.35□□□□□ -0.43
CASC4-204ENST00000557945 TRBV20-1A0A075B6N2 111 aa12.33□□□□□ -0.44
CASC4-204ENST00000557945 H3BQ85 93 aa12.33□□□□□ -0.44
CASC4-204ENST00000557945 SPAG11AQ6PDA7 123 aa12.33□□□□□ -0.44
CASC4-204ENST00000557945 NDUFV3P56181 108 aaKnown RBP12.31□□□□□ -0.44
CASC4-204ENST00000557945 TMEM256-PLSCR3K7ERE1 68 aa12.3□□□□□ -0.44
CASC4-204ENST00000557945 HERC1Q15751 4861 aa12.28□□□□□ -0.44
CASC4-204ENST00000557945 A0A0G2JQZ4 141 aa12.28□□□□□ -0.44
CASC4-204ENST00000557945 BAALC-AS2P0C853 105 aa12.28□□□□□ -0.44
CASC4-204ENST00000557945 HRCT1Q6UXD1 115 aa12.28□□□□□ -0.44
CASC4-204ENST00000557945 IGLV8-61A0A075B6I0 122 aa12.26□□□□□ -0.45
CASC4-204ENST00000557945 H3BMG7 143 aa12.26□□□□□ -0.45
CASC4-204ENST00000557945 SPINK1P00995 79 aa12.26□□□□□ -0.45
CASC4-204ENST00000557945 Q6JHZ5 121 aa12.26□□□□□ -0.45
CASC4-204ENST00000557945 UBE2V1Q13404 147 aa12.24□□□□□ -0.45
CASC4-204ENST00000557945 SPCS1Q9Y6A9 102 aa12.24□□□□□ -0.45
CASC4-204ENST00000557945 A0A1B0GV72 72 aa12.23□□□□□ -0.45
CASC4-204ENST00000557945 C9JAW5 83 aa12.23□□□□□ -0.45
CASC4-204ENST00000557945 IGFL1Q6UW32 110 aa12.22□□□□□ -0.45
CASC4-204ENST00000557945 ANKRD29Q8N6D5 301 aa12.2□□□□□ -0.46
CASC4-204ENST00000557945 CD164Q04900 197 aa12.19□□□□□ -0.46
CASC4-204ENST00000557945 RPS29P62273 56 aaKnown RBP12.17□□□□□ -0.46
CASC4-204ENST00000557945 RETNLBQ9BQ08 111 aa12.16□□□□□ -0.46
CASC4-204ENST00000557945 MTURNQ8N3F0 131 aa12.15□□□□□ -0.46
CASC4-204ENST00000557945 LIMD2Q9BT23 127 aa12.14□□□□□ -0.47
CASC4-204ENST00000557945 K7EP34 96 aa12.13□□□□□ -0.47
CASC4-204ENST00000557945 RBM3P98179 157 aaKnown RBP12.12□□□□□ -0.47
CASC4-204ENST00000557945 PRR4Q16378 134 aa12.12□□□□□ -0.47
CASC4-204ENST00000557945 H3BT86 120 aa12.1□□□□□ -0.47
CASC4-204ENST00000557945 TRBV7-7A0A0K0K1E9 115 aa12.09□□□□□ -0.47
CASC4-204ENST00000557945 GTF2H5Q6ZYL4 71 aa12.08□□□□□ -0.48
CASC4-204ENST00000557945 DSCR8Q96T75 97 aa12.08□□□□□ -0.48
CASC4-204ENST00000557945 JMJD7-PLA2G4BH0Y9G9 81 aa12.07□□□□□ -0.48
CASC4-204ENST00000557945 TEN1Q86WV5 123 aa12.07□□□□□ -0.48
CASC4-204ENST00000557945 A0A1W2PNM2 257 aa12.05□□□□□ -0.48
CASC4-204ENST00000557945 Q6Q795 121 aa12.05□□□□□ -0.48
CASC4-204ENST00000557945 TRBV7-4A0A0J9YYF1 115 aa12.05□□□□□ -0.48
CASC4-204ENST00000557945 Q5XG85 94 aa12.04□□□□□ -0.48
CASC4-204ENST00000557945 CCKP06307 115 aa12.03□□□□□ -0.48
CASC4-204ENST00000557945 VPS25Q9BRG1 176 aa12.02□□□□□ -0.49
CASC4-204ENST00000557945 HMCN2Q8NDA2 5059 aa12□□□□□ -0.49
CASC4-204ENST00000557945 A0A087WSZ3 146 aa12□□□□□ -0.49
CASC4-204ENST00000557945 SMCPP49901 116 aaPredicted RBP12□□□□□ -0.49
CASC4-204ENST00000557945 FP248Q71RG6 208 aaPredicted RBP12□□□□□ -0.49
CASC4-204ENST00000557945 IGLV7-46A0A075B6I9 117 aa11.99□□□□□ -0.49
CASC4-204ENST00000557945 C14orf132Q9NPU4 83 aa11.99□□□□□ -0.49
CASC4-204ENST00000557945 PRO0461Q9UI25 63 aa11.99□□□□□ -0.49
CASC4-204ENST00000557945 OBSCN-AS1Q96MR7 158 aa11.98□□□□□ -0.49
CASC4-204ENST00000557945 LOC110117498A0A087WWA1 95 aa11.96□□□□□ -0.49
CASC4-204ENST00000557945 C1orf195Q5TG92 126 aa11.96□□□□□ -0.49
CASC4-204ENST00000557945 SS18L2Q9UHA2 77 aa11.96□□□□□ -0.49
CASC4-204ENST00000557945 PDE6GP18545 87 aa11.95□□□□□ -0.5
CASC4-204ENST00000557945 ASB16-AS1Q495Z4 193 aa11.94□□□□□ -0.5
CASC4-204ENST00000557945 Q6ZQT0 140 aa11.94□□□□□ -0.5
CASC4-204ENST00000557945 F8W1H4 67 aa11.91□□□□□ -0.5
CASC4-204ENST00000557945 A0A1B0GV90 55 aa11.89□□□□□ -0.51
CASC4-204ENST00000557945 C21orf62-AS1Q17RA5 79 aa11.85□□□□□ -0.51
CASC4-204ENST00000557945 TPRXLQ17RH7 258 aa11.84□□□□□ -0.51
CASC4-204ENST00000557945 LPAP08519 4548 aa11.83□□□□□ -0.52
CASC4-204ENST00000557945 A0A1B0GW54 56 aa11.81□□□□□ -0.52
CASC4-204ENST00000557945 KRTAP13-3Q3SY46 172 aa11.81□□□□□ -0.52
CASC4-204ENST00000557945 ETDBQ3ZM63 59 aa11.8□□□□□ -0.52
CASC4-204ENST00000557945 CDIP1Q9H305 208 aa11.8□□□□□ -0.52
CASC4-204ENST00000557945 Q96NJ1 140 aa11.79□□□□□ -0.52
CASC4-204ENST00000557945 LRP2P98164 4655 aa11.78□□□□□ -0.52
CASC4-204ENST00000557945 DEFB116Q30KQ4 102 aa11.77□□□□□ -0.53
CASC4-204ENST00000557945 SIGMAR1Q99720 223 aa11.76□□□□□ -0.53
CASC4-204ENST00000557945 LINC00472Q9H8W2 130 aa11.76□□□□□ -0.53
CASC4-204ENST00000557945 C9orf92A6NGG3 77 aa11.75□□□□□ -0.53
CASC4-204ENST00000557945 IGKV4-1P06312 121 aa11.75□□□□□ -0.53
CASC4-204ENST00000557945 NREPQ16612 68 aa11.71□□□□□ -0.53
CASC4-204ENST00000557945 J3KT08 172 aa11.66□□□□□ -0.54
CASC4-204ENST00000557945 XP32Q5T750 250 aa11.64□□□□□ -0.55
CASC4-204ENST00000557945 Q6ZVQ6 151 aa11.6□□□□□ -0.55
CASC4-204ENST00000557945 LINC00846Q9NV44 126 aa11.6□□□□□ -0.55
CASC4-204ENST00000557945 IGHV6-1A0A0B4J1U7 121 aa11.58□□□□□ -0.56
CASC4-204ENST00000557945 DSCR10P59022 87 aa11.58□□□□□ -0.56
CASC4-204ENST00000557945 UBL5Q9BZL1 73 aa11.57□□□□□ -0.56
CASC4-204ENST00000557945 A0A1B0GVX0 72 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 168.8 ms