RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 C9orf153Q5TBE3 101 aa7.2□□□□□ -1.26
SLIRP-211ENST00000557623 LAMTOR3Q9UHA4 124 aa7.2□□□□□ -1.26
SLIRP-211ENST00000557623 SLC25A20O43772 301 aa7.19□□□□□ -1.26
SLIRP-211ENST00000557623 PYY3Q5JQD4 70 aa7.19□□□□□ -1.26
SLIRP-211ENST00000557623 TEX49A0A1B0GTD5 131 aa7.18□□□□□ -1.26
SLIRP-211ENST00000557623 C12orf57Q99622 126 aa7.18□□□□□ -1.26
SLIRP-211ENST00000557623 RPS29P62273 56 aaKnown RBP7.17□□□□□ -1.26
SLIRP-211ENST00000557623 C2orf91Q6ZV80 131 aa7.17□□□□□ -1.26
SLIRP-211ENST00000557623 DEFB105AQ8NG35 78 aa7.17□□□□□ -1.26
SLIRP-211ENST00000557623 RAB37Q96AX2 223 aa7.16□□□□□ -1.26
SLIRP-211ENST00000557623 RETNLBQ9BQ08 111 aa7.16□□□□□ -1.26
SLIRP-211ENST00000557623 IGLV5-48A0A075B6I7 105 aa7.15□□□□□ -1.26
SLIRP-211ENST00000557623 CFC1BP0CG36 223 aa7.15□□□□□ -1.26
SLIRP-211ENST00000557623 CFC1P0CG37 223 aa7.15□□□□□ -1.26
SLIRP-211ENST00000557623 BVES-AS1Q5T3Y7 98 aa7.15□□□□□ -1.26
SLIRP-211ENST00000557623 CEND1Q8N111 149 aa7.15□□□□□ -1.26
SLIRP-211ENST00000557623 A0A0B4J2C4 111 aa7.14□□□□□ -1.27
SLIRP-211ENST00000557623 LINC00575Q6W349 94 aa7.14□□□□□ -1.27
SLIRP-211ENST00000557623 hADV29S1A0JD25 119 aa7.13□□□□□ -1.27
SLIRP-211ENST00000557623 LINC01547P58512 204 aaPredicted RBP7.13□□□□□ -1.27
SLIRP-211ENST00000557623 Q1RN00 199 aa7.13□□□□□ -1.27
SLIRP-211ENST00000557623 FP248Q71RG6 208 aaPredicted RBP7.13□□□□□ -1.27
SLIRP-211ENST00000557623 LRP2P98164 4655 aa7.13□□□□□ -1.27
SLIRP-211ENST00000557623 IGLV7-46A0A075B6I9 117 aa7.12□□□□□ -1.27
SLIRP-211ENST00000557623 H7C2G1 150 aa7.11□□□□□ -1.27
SLIRP-211ENST00000557623 PRO1933Q9H354 126 aa7.11□□□□□ -1.27
SLIRP-211ENST00000557623 LPAP08519 4548 aa7.1□□□□□ -1.27
SLIRP-211ENST00000557623 SNCGO76070 127 aa7.1□□□□□ -1.27
SLIRP-211ENST00000557623 HSD52Q0P140 79 aa7.1□□□□□ -1.27
SLIRP-211ENST00000557623 SMIM29Q86T20 159 aa7.1□□□□□ -1.27
SLIRP-211ENST00000557623 Q8N377 158 aa7.1□□□□□ -1.27
SLIRP-211ENST00000557623 UQCR10Q9UDW1 63 aa7.1□□□□□ -1.27
SLIRP-211ENST00000557623 TPRXLQ17RH7 258 aa7.09□□□□□ -1.27
SLIRP-211ENST00000557623 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.09□□□□□ -1.27
SLIRP-211ENST00000557623 Q6ZQY7 126 aa7.09□□□□□ -1.27
SLIRP-211ENST00000557623 LIMD2Q9BT23 127 aa7.09□□□□□ -1.27
SLIRP-211ENST00000557623 PRO1854Q9UHT4 67 aa7.09□□□□□ -1.27
SLIRP-211ENST00000557623 H0YGX0 51 aa7.08□□□□□ -1.28
SLIRP-211ENST00000557623 FXYD2P54710 66 aa7.08□□□□□ -1.28
SLIRP-211ENST00000557623 CD164Q04900 197 aa7.08□□□□□ -1.28
SLIRP-211ENST00000557623 F8WEM9 126 aa7.07□□□□□ -1.28
SLIRP-211ENST00000557623 PPDPFLQ8WWR9 84 aa7.07□□□□□ -1.28
SLIRP-211ENST00000557623 HRCT1Q6UXD1 115 aa7.06□□□□□ -1.28
SLIRP-211ENST00000557623 UBR4Q5T4S7 5183 aa7.06□□□□□ -1.28
SLIRP-211ENST00000557623 OCIAD2Q56VL3 154 aa7.04□□□□□ -1.28
SLIRP-211ENST00000557623 A0A1B0GX51 115 aa7.03□□□□□ -1.28
SLIRP-211ENST00000557623 Q6JHZ5 121 aa7.02□□□□□ -1.29
SLIRP-211ENST00000557623 SNHG12Q9BXW3 62 aa7.02□□□□□ -1.29
SLIRP-211ENST00000557623 IGLV8-61A0A075B6I0 122 aa7□□□□□ -1.29
SLIRP-211ENST00000557623 SMIM6P0DI80 62 aa7□□□□□ -1.29
SLIRP-211ENST00000557623 KRTAP13-3Q3SY46 172 aa7□□□□□ -1.29
SLIRP-211ENST00000557623 Q5XG85 94 aa7□□□□□ -1.29
SLIRP-211ENST00000557623 FAM218AQ96MZ4 157 aa7□□□□□ -1.29
SLIRP-211ENST00000557623 TRIAP1O43715 76 aa6.99□□□□□ -1.29
SLIRP-211ENST00000557623 COX6CP09669 75 aa6.99□□□□□ -1.29
SLIRP-211ENST00000557623 PSMB2P49721 201 aa6.99□□□□□ -1.29
SLIRP-211ENST00000557623 K7ERJ3 54 aa6.98□□□□□ -1.29
SLIRP-211ENST00000557623 CLEC2BQ92478 149 aa6.98□□□□□ -1.29
SLIRP-211ENST00000557623 A0A0G2JQZ4 141 aa6.97□□□□□ -1.29
SLIRP-211ENST00000557623 TCL1BO95988 128 aa6.97□□□□□ -1.29
SLIRP-211ENST00000557623 IGFL1Q6UW32 110 aa6.96□□□□□ -1.3
SLIRP-211ENST00000557623 H3BQ85 93 aa6.95□□□□□ -1.3
SLIRP-211ENST00000557623 DNAL4O96015 105 aa6.95□□□□□ -1.3
SLIRP-211ENST00000557623 M0R143 59 aa6.94□□□□□ -1.3
SLIRP-211ENST00000557623 NDUFV3P56181 108 aaKnown RBP6.94□□□□□ -1.3
SLIRP-211ENST00000557623 TRBV7-7A0A0K0K1E9 115 aa6.93□□□□□ -1.3
SLIRP-211ENST00000557623 H3BUT2 72 aa6.92□□□□□ -1.3
SLIRP-211ENST00000557623 FABP2P12104 132 aa6.92□□□□□ -1.3
SLIRP-211ENST00000557623 C1orf195Q5TG92 126 aa6.92□□□□□ -1.3
SLIRP-211ENST00000557623 ORMDL1Q9P0S3 153 aa6.92□□□□□ -1.3
SLIRP-211ENST00000557623 TSTD3H0UI37 97 aa6.91□□□□□ -1.3
SLIRP-211ENST00000557623 SCGB1C2P0DMR2 95 aa6.91□□□□□ -1.3
SLIRP-211ENST00000557623 ASB16-AS1Q495Z4 193 aa6.91□□□□□ -1.3
SLIRP-211ENST00000557623 H3BMG7 143 aa6.9□□□□□ -1.3
SLIRP-211ENST00000557623 LOC105371267A0A1B0GV96 52 aa6.89□□□□□ -1.31
SLIRP-211ENST00000557623 TMEM256-PLSCR3K7ERE1 68 aa6.89□□□□□ -1.31
SLIRP-211ENST00000557623 SEC61BP60468 96 aaKnown RBP6.89□□□□□ -1.31
SLIRP-211ENST00000557623 Q6Q795 121 aa6.89□□□□□ -1.31
SLIRP-211ENST00000557623 A0A0U1RQV1 116 aa6.88□□□□□ -1.31
SLIRP-211ENST00000557623 TRACP01848 142 aa6.88□□□□□ -1.31
SLIRP-211ENST00000557623 TEN1Q86WV5 123 aa6.88□□□□□ -1.31
SLIRP-211ENST00000557623 SS18L2Q9UHA2 77 aa6.87□□□□□ -1.31
SLIRP-211ENST00000557623 C9orf92A6NGG3 77 aa6.86□□□□□ -1.31
SLIRP-211ENST00000557623 LST1O00453 97 aa6.86□□□□□ -1.31
SLIRP-211ENST00000557623 UBE2V1Q13404 147 aa6.85□□□□□ -1.31
SLIRP-211ENST00000557623 RNF213Q63HN8 5207 aa6.85□□□□□ -1.31
SLIRP-211ENST00000557623 MUC17Q685J3 4493 aa6.84□□□□□ -1.31
SLIRP-211ENST00000557623 ANKRD29Q8N6D5 301 aa6.84□□□□□ -1.31
SLIRP-211ENST00000557623 A0A087WSZ3 146 aa6.81□□□□□ -1.32
SLIRP-211ENST00000557623 ATXN8Q156A1 80 aa6.81□□□□□ -1.32
SLIRP-211ENST00000557623 LYRM7Q5U5X0 104 aa6.81□□□□□ -1.32
SLIRP-211ENST00000557623 KRTAP15-1Q3LI76 137 aa6.8□□□□□ -1.32
SLIRP-211ENST00000557623 TRBV7-4A0A0J9YYF1 115 aa6.79□□□□□ -1.32
SLIRP-211ENST00000557623 A0A1B0GV72 72 aa6.79□□□□□ -1.32
SLIRP-211ENST00000557623 A0A1W2PNM2 257 aa6.79□□□□□ -1.32
SLIRP-211ENST00000557623 BAALC-AS2P0C853 105 aa6.79□□□□□ -1.32
SLIRP-211ENST00000557623 BATFQ16520 125 aa6.79□□□□□ -1.32
SLIRP-211ENST00000557623 RBM3P98179 157 aaKnown RBP6.78□□□□□ -1.32
SLIRP-211ENST00000557623 NAA38Q9BRA0 125 aaKnown RBP6.78□□□□□ -1.32
SLIRP-211ENST00000557623 CCKP06307 115 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms