RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 SSBP3-AS1Q7Z2R9 100 aa4.87□□□□□ -1.63
PSEN1-223ENST00000557511 RAB37Q96AX2 223 aa4.87□□□□□ -1.63
PSEN1-223ENST00000557511 HIGD1BQ9P298 99 aa4.87□□□□□ -1.63
PSEN1-223ENST00000557511 MOBPQ13875 183 aa4.86□□□□□ -1.63
PSEN1-223ENST00000557511 ST20-AS1Q8NBB2 130 aa4.86□□□□□ -1.63
PSEN1-223ENST00000557511 Q8NBF4 154 aa4.86□□□□□ -1.63
PSEN1-223ENST00000557511 SMIM11BQ8TCY0 68 aa4.86□□□□□ -1.63
PSEN1-223ENST00000557511 SPINK1P00995 79 aa4.85□□□□□ -1.63
PSEN1-223ENST00000557511 BVES-AS1Q5T3Y7 98 aa4.85□□□□□ -1.63
PSEN1-223ENST00000557511 DEFB105AQ8NG35 78 aa4.85□□□□□ -1.63
PSEN1-223ENST00000557511 C12orf57Q99622 126 aa4.85□□□□□ -1.63
PSEN1-223ENST00000557511 TEX49A0A1B0GTD5 131 aa4.84□□□□□ -1.63
PSEN1-223ENST00000557511 H7C2G1 150 aa4.84□□□□□ -1.63
PSEN1-223ENST00000557511 Q1RN00 199 aa4.84□□□□□ -1.63
PSEN1-223ENST00000557511 PYY3Q5JQD4 70 aa4.84□□□□□ -1.63
PSEN1-223ENST00000557511 F8WEM9 126 aa4.83□□□□□ -1.64
PSEN1-223ENST00000557511 SPRR1BP22528 89 aa4.83□□□□□ -1.64
PSEN1-223ENST00000557511 hADV29S1A0JD25 119 aa4.82□□□□□ -1.64
PSEN1-223ENST00000557511 CEND1Q8N111 149 aa4.82□□□□□ -1.64
PSEN1-223ENST00000557511 A0A0B4J2C4 111 aa4.81□□□□□ -1.64
PSEN1-223ENST00000557511 HSD52Q0P140 79 aa4.81□□□□□ -1.64
PSEN1-223ENST00000557511 UQCR10Q9UDW1 63 aa4.81□□□□□ -1.64
PSEN1-223ENST00000557511 H0YGX0 51 aa4.8□□□□□ -1.64
PSEN1-223ENST00000557511 CFC1BP0CG36 223 aa4.8□□□□□ -1.64
PSEN1-223ENST00000557511 CFC1P0CG37 223 aa4.8□□□□□ -1.64
PSEN1-223ENST00000557511 RPS29P62273 56 aaKnown RBP4.8□□□□□ -1.64
PSEN1-223ENST00000557511 LINC00575Q6W349 94 aa4.8□□□□□ -1.64
PSEN1-223ENST00000557511 C2orf91Q6ZV80 131 aa4.8□□□□□ -1.64
PSEN1-223ENST00000557511 RETNLBQ9BQ08 111 aa4.8□□□□□ -1.64
PSEN1-223ENST00000557511 LIMD2Q9BT23 127 aa4.8□□□□□ -1.64
PSEN1-223ENST00000557511 PRO1933Q9H354 126 aa4.8□□□□□ -1.64
PSEN1-223ENST00000557511 IGLV7-46A0A075B6I9 117 aa4.79□□□□□ -1.64
PSEN1-223ENST00000557511 FP248Q71RG6 208 aaPredicted RBP4.79□□□□□ -1.64
PSEN1-223ENST00000557511 PRO1854Q9UHT4 67 aa4.79□□□□□ -1.64
PSEN1-223ENST00000557511 UBR4Q5T4S7 5183 aa4.79□□□□□ -1.64
PSEN1-223ENST00000557511 IGLV5-48A0A075B6I7 105 aa4.78□□□□□ -1.64
PSEN1-223ENST00000557511 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.78□□□□□ -1.64
PSEN1-223ENST00000557511 Q6ZQY7 126 aa4.78□□□□□ -1.64
PSEN1-223ENST00000557511 SNHG12Q9BXW3 62 aa4.78□□□□□ -1.64
PSEN1-223ENST00000557511 COX6CP09669 75 aa4.77□□□□□ -1.65
PSEN1-223ENST00000557511 PSMB2P49721 201 aa4.77□□□□□ -1.65
PSEN1-223ENST00000557511 OCIAD2Q56VL3 154 aa4.77□□□□□ -1.65
PSEN1-223ENST00000557511 HRCT1Q6UXD1 115 aa4.77□□□□□ -1.65
PSEN1-223ENST00000557511 PPDPFLQ8WWR9 84 aa4.77□□□□□ -1.65
PSEN1-223ENST00000557511 SMIM6P0DI80 62 aa4.76□□□□□ -1.65
PSEN1-223ENST00000557511 FXYD2P54710 66 aa4.76□□□□□ -1.65
PSEN1-223ENST00000557511 CD164Q04900 197 aa4.76□□□□□ -1.65
PSEN1-223ENST00000557511 Q8N377 158 aa4.76□□□□□ -1.65
PSEN1-223ENST00000557511 LRP2P98164 4655 aa4.76□□□□□ -1.65
PSEN1-223ENST00000557511 A0A1B0GX51 115 aa4.75□□□□□ -1.65
PSEN1-223ENST00000557511 DNAL4O96015 105 aa4.75□□□□□ -1.65
PSEN1-223ENST00000557511 LINC01547P58512 204 aaPredicted RBP4.75□□□□□ -1.65
PSEN1-223ENST00000557511 TPRXLQ17RH7 258 aa4.74□□□□□ -1.65
PSEN1-223ENST00000557511 Q6JHZ5 121 aa4.74□□□□□ -1.65
PSEN1-223ENST00000557511 SMIM29Q86T20 159 aa4.74□□□□□ -1.65
PSEN1-223ENST00000557511 H3BQ85 93 aa4.73□□□□□ -1.65
PSEN1-223ENST00000557511 TCL1BO95988 128 aa4.73□□□□□ -1.65
PSEN1-223ENST00000557511 M0R143 59 aa4.72□□□□□ -1.65
PSEN1-223ENST00000557511 SCGB1C2P0DMR2 95 aa4.72□□□□□ -1.65
PSEN1-223ENST00000557511 TSTD3H0UI37 97 aa4.71□□□□□ -1.66
PSEN1-223ENST00000557511 FABP2P12104 132 aa4.71□□□□□ -1.66
PSEN1-223ENST00000557511 K7ERJ3 54 aa4.7□□□□□ -1.66
PSEN1-223ENST00000557511 CLEC2BQ92478 149 aa4.7□□□□□ -1.66
PSEN1-223ENST00000557511 ORMDL1Q9P0S3 153 aa4.69□□□□□ -1.66
PSEN1-223ENST00000557511 IGLV8-61A0A075B6I0 122 aa4.68□□□□□ -1.66
PSEN1-223ENST00000557511 NDUFV3P56181 108 aaKnown RBP4.68□□□□□ -1.66
PSEN1-223ENST00000557511 Q5XG85 94 aa4.68□□□□□ -1.66
PSEN1-223ENST00000557511 FAM218AQ96MZ4 157 aa4.68□□□□□ -1.66
PSEN1-223ENST00000557511 RNF213Q63HN8 5207 aa4.68□□□□□ -1.66
PSEN1-223ENST00000557511 LPAP08519 4548 aa4.67□□□□□ -1.66
PSEN1-223ENST00000557511 A0A0U1RQV1 116 aa4.67□□□□□ -1.66
PSEN1-223ENST00000557511 H3BMG7 143 aa4.67□□□□□ -1.66
PSEN1-223ENST00000557511 TMEM256-PLSCR3K7ERE1 68 aa4.67□□□□□ -1.66
PSEN1-223ENST00000557511 IGFL1Q6UW32 110 aa4.67□□□□□ -1.66
PSEN1-223ENST00000557511 A0A0G2JQZ4 141 aa4.66□□□□□ -1.66
PSEN1-223ENST00000557511 TRBV7-7A0A0K0K1E9 115 aa4.66□□□□□ -1.66
PSEN1-223ENST00000557511 H3BUT2 72 aa4.66□□□□□ -1.66
PSEN1-223ENST00000557511 KRTAP13-3Q3SY46 172 aa4.66□□□□□ -1.66
PSEN1-223ENST00000557511 LYRM7Q5U5X0 104 aa4.66□□□□□ -1.66
PSEN1-223ENST00000557511 SS18L2Q9UHA2 77 aa4.66□□□□□ -1.66
PSEN1-223ENST00000557511 SEC61BP60468 96 aaKnown RBP4.65□□□□□ -1.67
PSEN1-223ENST00000557511 LST1O00453 97 aa4.64□□□□□ -1.67
PSEN1-223ENST00000557511 TRACP01848 142 aa4.64□□□□□ -1.67
PSEN1-223ENST00000557511 BATFQ16520 125 aa4.64□□□□□ -1.67
PSEN1-223ENST00000557511 C1orf195Q5TG92 126 aa4.64□□□□□ -1.67
PSEN1-223ENST00000557511 KRTAP5-3Q6L8H2 238 aa4.64□□□□□ -1.67
PSEN1-223ENST00000557511 TEN1Q86WV5 123 aa4.64□□□□□ -1.67
PSEN1-223ENST00000557511 ANKRD29Q8N6D5 301 aa4.64□□□□□ -1.67
PSEN1-223ENST00000557511 PCP4L1A6NKN8 68 aa4.63□□□□□ -1.67
PSEN1-223ENST00000557511 ATXN8Q156A1 80 aa4.63□□□□□ -1.67
PSEN1-223ENST00000557511 C9orf92A6NGG3 77 aa4.62□□□□□ -1.67
PSEN1-223ENST00000557511 UBE2V1Q13404 147 aa4.62□□□□□ -1.67
PSEN1-223ENST00000557511 ASB16-AS1Q495Z4 193 aa4.62□□□□□ -1.67
PSEN1-223ENST00000557511 Q6Q795 121 aa4.62□□□□□ -1.67
PSEN1-223ENST00000557511 A0A1B0GV72 72 aa4.61□□□□□ -1.67
PSEN1-223ENST00000557511 A0A087WSZ3 146 aa4.6□□□□□ -1.67
PSEN1-223ENST00000557511 DSCR8Q96T75 97 aa4.6□□□□□ -1.67
PSEN1-223ENST00000557511 BAALC-AS2P0C853 105 aa4.59□□□□□ -1.67
PSEN1-223ENST00000557511 RBM3P98179 157 aaKnown RBP4.59□□□□□ -1.67
PSEN1-223ENST00000557511 TRBV20-1A0A075B6N2 111 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms