RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 IGHV3-53P01767 116 aa3.17□□□□□ -1.9
ATXN3-247ENST00000557311 Q86TA4 180 aa3.17□□□□□ -1.9
ATXN3-247ENST00000557311 CIRBP-AS1Q8TBR5 109 aa3.17□□□□□ -1.9
ATXN3-247ENST00000557311 RNF185Q96GF1 192 aa3.17□□□□□ -1.9
ATXN3-247ENST00000557311 IGLV5-45A0A087WSX0 123 aa3.16□□□□□ -1.9
ATXN3-247ENST00000557311 IGHV6-1A0A0B4J1U7 121 aa3.16□□□□□ -1.9
ATXN3-247ENST00000557311 TRGV4A0A0C4DH28 118 aa3.16□□□□□ -1.9
ATXN3-247ENST00000557311 HCG22E2RYF7 251 aa3.16□□□□□ -1.9
ATXN3-247ENST00000557311 CHKB-CPT1BH3BT56 60 aa3.16□□□□□ -1.9
ATXN3-247ENST00000557311 PPP1R17O96001 155 aa3.16□□□□□ -1.9
ATXN3-247ENST00000557311 MT1HL1P0DM35 61 aa3.16□□□□□ -1.9
ATXN3-247ENST00000557311 PRB4P10163 310 aaPredicted RBP3.16□□□□□ -1.9
ATXN3-247ENST00000557311 PRR3P79522 188 aaKnown RBP3.16□□□□□ -1.9
ATXN3-247ENST00000557311 LINC01556Q5JQF7 62 aa3.16□□□□□ -1.9
ATXN3-247ENST00000557311 C10orf113Q5VZT2 155 aa3.16□□□□□ -1.9
ATXN3-247ENST00000557311 LYZL1Q6UWQ5 148 aa3.16□□□□□ -1.9
ATXN3-247ENST00000557311 Q6ZRP5 223 aa3.16□□□□□ -1.9
ATXN3-247ENST00000557311 Q75L30 129 aa3.16□□□□□ -1.9
ATXN3-247ENST00000557311 FAM167A-AS1Q96KT0 104 aa3.16□□□□□ -1.9
ATXN3-247ENST00000557311 LIMD2Q9BT23 127 aa3.16□□□□□ -1.9
ATXN3-247ENST00000557311 UBL5Q9BZL1 73 aa3.16□□□□□ -1.9
ATXN3-247ENST00000557311 LINC00846Q9NV44 126 aa3.16□□□□□ -1.9
ATXN3-247ENST00000557311 TMEM14CQ9P0S9 112 aa3.16□□□□□ -1.9
ATXN3-247ENST00000557311 LRP2P98164 4655 aa3.16□□□□□ -1.9
ATXN3-247ENST00000557311 RNF213Q63HN8 5207 aa3.15□□□□□ -1.9
ATXN3-247ENST00000557311 GNRH2O43555 120 aa3.15□□□□□ -1.91
ATXN3-247ENST00000557311 RPL37AP61513 92 aaKnown RBP3.15□□□□□ -1.91
ATXN3-247ENST00000557311 ENHOQ6UWT2 76 aa3.15□□□□□ -1.91
ATXN3-247ENST00000557311 PATE2Q6UY27 113 aa3.15□□□□□ -1.91
ATXN3-247ENST00000557311 TMEM254Q8TBM7 123 aa3.15□□□□□ -1.91
ATXN3-247ENST00000557311 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.14□□□□□ -1.91
ATXN3-247ENST00000557311 ASB16-AS1Q495Z4 193 aa3.14□□□□□ -1.91
ATXN3-247ENST00000557311 ADAMTSL4-AS1Q5T5F5 129 aa3.14□□□□□ -1.91
ATXN3-247ENST00000557311 IGHV1OR15-1A0A075B7D0 117 aa3.13□□□□□ -1.91
ATXN3-247ENST00000557311 TRAV21A0A0B4J279 112 aa3.13□□□□□ -1.91
ATXN3-247ENST00000557311 TRBV7-4A0A0J9YYF1 115 aa3.13□□□□□ -1.91
ATXN3-247ENST00000557311 A6NED7 52 aa3.13□□□□□ -1.91
ATXN3-247ENST00000557311 IGIPA6NJ69 53 aa3.13□□□□□ -1.91
ATXN3-247ENST00000557311 SMIM1B2RUZ4 78 aa3.13□□□□□ -1.91
ATXN3-247ENST00000557311 LECT2O14960 151 aa3.13□□□□□ -1.91
ATXN3-247ENST00000557311 IGHV3-30-3P0DP02 117 aa3.13□□□□□ -1.91
ATXN3-247ENST00000557311 NREPQ16612 68 aa3.13□□□□□ -1.91
ATXN3-247ENST00000557311 KRTAP5-1Q6L8H4 278 aa3.13□□□□□ -1.91
ATXN3-247ENST00000557311 C14orf178Q8N769 122 aaPredicted RBP3.13□□□□□ -1.91
ATXN3-247ENST00000557311 C14orf132Q9NPU4 83 aa3.13□□□□□ -1.91
ATXN3-247ENST00000557311 CDC42SE1Q9NRR8 79 aa3.13□□□□□ -1.91
ATXN3-247ENST00000557311 MIAQ16674 131 aa3.12□□□□□ -1.91
ATXN3-247ENST00000557311 C9orf116Q5BN46 136 aaPredicted RBP3.12□□□□□ -1.91
ATXN3-247ENST00000557311 LELP1Q5T871 98 aa3.12□□□□□ -1.91
ATXN3-247ENST00000557311 Q5VV11 94 aa3.12□□□□□ -1.91
ATXN3-247ENST00000557311 NOTCH2NLQ7Z3S9 236 aa3.12□□□□□ -1.91
ATXN3-247ENST00000557311 OBSCN-AS1Q96MR7 158 aa3.12□□□□□ -1.91
ATXN3-247ENST00000557311 SMIM2Q9BVW6 85 aa3.12□□□□□ -1.91
ATXN3-247ENST00000557311 PKHD1L1Q86WI1 4243 aa3.11□□□□□ -1.91
ATXN3-247ENST00000557311 TRBV6-8A0A0A6YYG3 113 aa3.11□□□□□ -1.91
ATXN3-247ENST00000557311 A0A0J9YXY3 114 aa3.11□□□□□ -1.91
ATXN3-247ENST00000557311 JMJD7-PLA2G4BH0Y9G9 81 aa3.11□□□□□ -1.91
ATXN3-247ENST00000557311 C2orf66Q6UXQ4 117 aa3.11□□□□□ -1.91
ATXN3-247ENST00000557311 CASC2Q6XLA1 102 aa3.11□□□□□ -1.91
ATXN3-247ENST00000557311 A0A087X002 238 aa3.1□□□□□ -1.91
ATXN3-247ENST00000557311 TSPEAR-AS2P59090 65 aa3.1□□□□□ -1.91
ATXN3-247ENST00000557311 ZFAND2AQ8N6M9 145 aa3.1□□□□□ -1.91
ATXN3-247ENST00000557311 CHCHD10Q8WYQ3 142 aaPredicted RBP3.1□□□□□ -1.91
ATXN3-247ENST00000557311 AMELXQ99217 191 aa3.1□□□□□ -1.91
ATXN3-247ENST00000557311 RETNLBQ9BQ08 111 aa3.1□□□□□ -1.91
ATXN3-247ENST00000557311 KIF25-AS1Q9Y6Z4 181 aa3.1□□□□□ -1.91
ATXN3-247ENST00000557311 IGLV4-69A0A075B6H9 119 aa3.09□□□□□ -1.91
ATXN3-247ENST00000557311 IGHV3-16A0A0C4DH30 117 aa3.09□□□□□ -1.91
ATXN3-247ENST00000557311 A0A1B0GW54 56 aa3.09□□□□□ -1.91
ATXN3-247ENST00000557311 TRBV6-4A0A1B0GX49 114 aa3.09□□□□□ -1.91
ATXN3-247ENST00000557311 PDE6HQ13956 83 aa3.09□□□□□ -1.91
ATXN3-247ENST00000557311 C14orf177Q52M58 125 aa3.09□□□□□ -1.91
ATXN3-247ENST00000557311 PRR9Q5T870 116 aa3.09□□□□□ -1.91
ATXN3-247ENST00000557311 C1orf64Q8NEQ6 169 aa3.09□□□□□ -1.91
ATXN3-247ENST00000557311 PRR15LQ9BU68 103 aa3.09□□□□□ -1.91
ATXN3-247ENST00000557311 CNFNQ9BYD5 112 aa3.09□□□□□ -1.91
ATXN3-247ENST00000557311 ORMDL1Q9P0S3 153 aa3.09□□□□□ -1.91
ATXN3-247ENST00000557311 TNXBP22105 4242 aa3.09□□□□□ -1.92
ATXN3-247ENST00000557311 IGKV2D-24A0A075B6R9 120 aa3.08□□□□□ -1.92
ATXN3-247ENST00000557311 H0YGX0 51 aa3.08□□□□□ -1.92
ATXN3-247ENST00000557311 REG3AQ06141 175 aa3.08□□□□□ -1.92
ATXN3-247ENST00000557311 IGKV2-40A0A087WW87 121 aaPredicted RBP3.07□□□□□ -1.92
ATXN3-247ENST00000557311 BPY2O14599 106 aa3.07□□□□□ -1.92
ATXN3-247ENST00000557311 IGKV2D-40P01614 121 aaPredicted RBP3.07□□□□□ -1.92
ATXN3-247ENST00000557311 MOBPQ13875 183 aa3.07□□□□□ -1.92
ATXN3-247ENST00000557311 C9orf163Q8N9P6 203 aa3.07□□□□□ -1.92
ATXN3-247ENST00000557311 C22orf24Q9Y442 160 aa3.07□□□□□ -1.92
ATXN3-247ENST00000557311 KRTAP10-8P60410 259 aa3.06□□□□□ -1.92
ATXN3-247ENST00000557311 LITAFQ99732 161 aa3.06□□□□□ -1.92
ATXN3-247ENST00000557311 CDC42SE2Q9NRR3 84 aa3.06□□□□□ -1.92
ATXN3-247ENST00000557311 KLK12Q9UKR0 248 aa3.06□□□□□ -1.92
ATXN3-247ENST00000557311 LENEPQ9Y5L5 61 aa3.06□□□□□ -1.92
ATXN3-247ENST00000557311 IGHV3-73A0A0B4J1V6 119 aa3.05□□□□□ -1.92
ATXN3-247ENST00000557311 A8MU10 97 aa3.05□□□□□ -1.92
ATXN3-247ENST00000557311 NDUFB1O75438 58 aa3.05□□□□□ -1.92
ATXN3-247ENST00000557311 CRIP1P50238 77 aa3.05□□□□□ -1.92
ATXN3-247ENST00000557311 ELOF1P60002 83 aaKnown RBP3.05□□□□□ -1.92
ATXN3-247ENST00000557311 Q8TAT8 98 aa3.05□□□□□ -1.92
ATXN3-247ENST00000557311 CHCHD7Q9BUK0 85 aa3.05□□□□□ -1.92
ATXN3-247ENST00000557311 LOC101927531A0A1B0GV80 90 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms