RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 LINC01549A6NIU2 74 aa2.29□□□□□ -2.04
SCFD1-223ENST00000557076 RPL23P62829 140 aaKnown RBP2.29□□□□□ -2.04
SCFD1-223ENST00000557076 ST20-AS1Q8NBB2 130 aa2.29□□□□□ -2.04
SCFD1-223ENST00000557076 SCGB3A1Q96QR1 104 aa2.29□□□□□ -2.04
SCFD1-223ENST00000557076 NXT2Q9NPJ8 142 aaKnown RBP2.29□□□□□ -2.04
SCFD1-223ENST00000557076 A0A1B0GWB2 263 aa2.28□□□□□ -2.04
SCFD1-223ENST00000557076 H7C2G1 150 aa2.28□□□□□ -2.04
SCFD1-223ENST00000557076 SMIM6P0DI80 62 aa2.28□□□□□ -2.04
SCFD1-223ENST00000557076 ADCYAP1P18509 176 aa2.28□□□□□ -2.04
SCFD1-223ENST00000557076 AKR1D1P51857 326 aa2.28□□□□□ -2.04
SCFD1-223ENST00000557076 PMVKQ15126 192 aa2.28□□□□□ -2.04
SCFD1-223ENST00000557076 MRPL54Q6P161 138 aaKnown RBP2.28□□□□□ -2.04
SCFD1-223ENST00000557076 CEND1Q8N111 149 aa2.28□□□□□ -2.04
SCFD1-223ENST00000557076 KRTAP2-1Q9BYU5 128 aa2.28□□□□□ -2.04
SCFD1-223ENST00000557076 PRO1933Q9H354 126 aa2.28□□□□□ -2.04
SCFD1-223ENST00000557076 LAMTOR3Q9UHA4 124 aa2.28□□□□□ -2.04
SCFD1-223ENST00000557076 TRBV10-2A0A0K0K1G8 114 aa2.27□□□□□ -2.05
SCFD1-223ENST00000557076 NCR3O14931 201 aa2.27□□□□□ -2.05
SCFD1-223ENST00000557076 DLEU1O43261 78 aa2.27□□□□□ -2.05
SCFD1-223ENST00000557076 FA2HQ7L5A8 372 aa2.27□□□□□ -2.05
SCFD1-223ENST00000557076 ATP5L2Q7Z4Y8 100 aa2.27□□□□□ -2.05
SCFD1-223ENST00000557076 LOC107984156A0A0G2JMH3 177 aa2.26□□□□□ -2.05
SCFD1-223ENST00000557076 A0A0G2JQZ4 141 aa2.26□□□□□ -2.05
SCFD1-223ENST00000557076 TCL1BO95988 128 aa2.26□□□□□ -2.05
SCFD1-223ENST00000557076 IGLC3P0DOY3 106 aa2.26□□□□□ -2.05
SCFD1-223ENST00000557076 DDTP30046 118 aa2.26□□□□□ -2.05
SCFD1-223ENST00000557076 ARL17AQ8IVW1 177 aa2.26□□□□□ -2.05
SCFD1-223ENST00000557076 GPR98Q8WXG9 6306 aa2.26□□□□□ -2.05
SCFD1-223ENST00000557076 FAM236DA0A1B0GTK5 79 aa2.25□□□□□ -2.05
SCFD1-223ENST00000557076 SRP19P09132 144 aaKnown RBP2.25□□□□□ -2.05
SCFD1-223ENST00000557076 SMIM13P0DJ93 91 aa2.25□□□□□ -2.05
SCFD1-223ENST00000557076 FAM236CP0DP71 79 aa2.25□□□□□ -2.05
SCFD1-223ENST00000557076 OBSCN-AS1Q96MR7 158 aa2.25□□□□□ -2.05
SCFD1-223ENST00000557076 SIGMAR1Q99720 223 aa2.25□□□□□ -2.05
SCFD1-223ENST00000557076 VPS25Q9BRG1 176 aa2.25□□□□□ -2.05
SCFD1-223ENST00000557076 LINC01546A6NGU7 62 aa2.24□□□□□ -2.05
SCFD1-223ENST00000557076 ZNF73O43830 326 aaPredicted RBP2.24□□□□□ -2.05
SCFD1-223ENST00000557076 SERF1AO75920 110 aa2.24□□□□□ -2.05
SCFD1-223ENST00000557076 ZNF22P17026 224 aaPredicted RBP2.24□□□□□ -2.05
SCFD1-223ENST00000557076 HINT1P49773 126 aaPredicted RBP2.24□□□□□ -2.05
SCFD1-223ENST00000557076 PCP2Q8IVA1 136 aa2.24□□□□□ -2.05
SCFD1-223ENST00000557076 SMIM20Q8N5G0 67 aa2.24□□□□□ -2.05
SCFD1-223ENST00000557076 MIR7-3HGQ8N6C7 128 aa2.24□□□□□ -2.05
SCFD1-223ENST00000557076 RBM12B-AS1Q9P1G2 102 aa2.24□□□□□ -2.05
SCFD1-223ENST00000557076 A6NN06 94 aa2.23□□□□□ -2.05
SCFD1-223ENST00000557076 A8MUU9 505 aa2.23□□□□□ -2.05
SCFD1-223ENST00000557076 ADIRFQ15847 76 aa2.23□□□□□ -2.05
SCFD1-223ENST00000557076 Q6ZVH6 145 aa2.23□□□□□ -2.05
SCFD1-223ENST00000557076 OR13C6PQ8NH95 151 aa2.23□□□□□ -2.05
SCFD1-223ENST00000557076 C14orf144Q96I85 54 aa2.23□□□□□ -2.05
SCFD1-223ENST00000557076 SPANXCQ9NY87 97 aa2.23□□□□□ -2.05
SCFD1-223ENST00000557076 NAT8Q9UHE5 227 aa2.23□□□□□ -2.05
SCFD1-223ENST00000557076 PRO0628Q9UI54 55 aa2.23□□□□□ -2.05
SCFD1-223ENST00000557076 TRAV23DV6A0A075B6W5 121 aa2.22□□□□□ -2.05
SCFD1-223ENST00000557076 TEX49A0A1B0GTD5 131 aa2.22□□□□□ -2.05
SCFD1-223ENST00000557076 A8MWP4 228 aa2.22□□□□□ -2.05
SCFD1-223ENST00000557076 NDUFC2O95298 119 aa2.22□□□□□ -2.05
SCFD1-223ENST00000557076 C4orf26Q17RF5 130 aa2.22□□□□□ -2.05
SCFD1-223ENST00000557076 S100A7L2Q5SY68 101 aa2.22□□□□□ -2.05
SCFD1-223ENST00000557076 Q96NJ1 140 aa2.22□□□□□ -2.05
SCFD1-223ENST00000557076 A0A0J9YXY3 114 aa2.21□□□□□ -2.06
SCFD1-223ENST00000557076 K7ERU9 68 aa2.21□□□□□ -2.06
SCFD1-223ENST00000557076 HRES1P13985 223 aa2.21□□□□□ -2.06
SCFD1-223ENST00000557076 NDUFA6P56556 154 aa2.21□□□□□ -2.06
SCFD1-223ENST00000557076 MEIG1Q5JSS6 88 aa2.21□□□□□ -2.06
SCFD1-223ENST00000557076 TMEM170BQ5T4T1 132 aa2.21□□□□□ -2.06
SCFD1-223ENST00000557076 COMMD7Q86VX2 200 aa2.21□□□□□ -2.06
SCFD1-223ENST00000557076 C11orf86A6NJI1 115 aa2.2□□□□□ -2.06
SCFD1-223ENST00000557076 KRTAP5-8O75690 187 aa2.2□□□□□ -2.06
SCFD1-223ENST00000557076 IGFL1Q6UW32 110 aa2.2□□□□□ -2.06
SCFD1-223ENST00000557076 DEFB105AQ8NG35 78 aa2.2□□□□□ -2.06
SCFD1-223ENST00000557076 SS18L2Q9UHA2 77 aa2.2□□□□□ -2.06
SCFD1-223ENST00000557076 MYMXA0A1B0GTQ4 84 aa2.19□□□□□ -2.06
SCFD1-223ENST00000557076 TMEM223A0PJW6 202 aa2.19□□□□□ -2.06
SCFD1-223ENST00000557076 C9JQL5 133 aa2.19□□□□□ -2.06
SCFD1-223ENST00000557076 BAGE3Q86Y29 109 aa2.19□□□□□ -2.06
SCFD1-223ENST00000557076 FAM240AA0A1B0GVK7 77 aa2.18□□□□□ -2.06
SCFD1-223ENST00000557076 IFITM2Q01629 132 aa2.18□□□□□ -2.06
SCFD1-223ENST00000557076 HIST1H4GQ99525 98 aa2.18□□□□□ -2.06
SCFD1-223ENST00000557076 IGLV5-48A0A075B6I7 105 aa2.17□□□□□ -2.06
SCFD1-223ENST00000557076 A6NDN8 102 aa2.17□□□□□ -2.06
SCFD1-223ENST00000557076 HBDP02042 147 aa2.17□□□□□ -2.06
SCFD1-223ENST00000557076 SPRR2EP22531 72 aa2.17□□□□□ -2.06
SCFD1-223ENST00000557076 SPRR2BP35325 72 aa2.17□□□□□ -2.06
SCFD1-223ENST00000557076 SPRR2AP35326 72 aa2.17□□□□□ -2.06
SCFD1-223ENST00000557076 RPS28P62857 69 aaKnown RBP2.17□□□□□ -2.06
SCFD1-223ENST00000557076 PEA15Q15121 130 aa2.17□□□□□ -2.06
SCFD1-223ENST00000557076 RHEBQ15382 184 aa2.17□□□□□ -2.06
SCFD1-223ENST00000557076 MIEN1Q9BRT3 115 aa2.17□□□□□ -2.06
SCFD1-223ENST00000557076 HSPB8Q9UJY1 196 aa2.17□□□□□ -2.06
SCFD1-223ENST00000557076 A0A096LNJ9 63 aa2.16□□□□□ -2.06
SCFD1-223ENST00000557076 TRBV7-7A0A0K0K1E9 115 aa2.16□□□□□ -2.06
SCFD1-223ENST00000557076 M0R143 59 aa2.16□□□□□ -2.06
SCFD1-223ENST00000557076 COX7BP24311 80 aa2.16□□□□□ -2.06
SCFD1-223ENST00000557076 ELOF1P60002 83 aaKnown RBP2.16□□□□□ -2.06
SCFD1-223ENST00000557076 SMCO4Q9NRQ5 59 aa2.16□□□□□ -2.06
SCFD1-223ENST00000557076 TRBV7-6A0A0J9YX20 115 aa2.15□□□□□ -2.07
SCFD1-223ENST00000557076 ZNF815PA8K554 130 aa2.15□□□□□ -2.07
SCFD1-223ENST00000557076 LST1O00453 97 aa2.15□□□□□ -2.07
SCFD1-223ENST00000557076 MT-ND4LP03901 98 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms