RNA–Protein interactions for RNA: ENST00000556772.5

NUMB-223, Transcript of NUMB, endocytic adaptor protein, human

TSL 1 (best) BASIC

Gene NUMB, Length 5,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUMB-223	ENST00000556772	HIVEP1	P15822	2718 aa		5.19	□□□□□ -1.58
NUMB-223	ENST00000556772	FAM229A	H3BQW9	127 aa		5.19	□□□□□ -1.58
NUMB-223	ENST00000556772	DSCR10	P59022	87 aa		5.19	□□□□□ -1.58
NUMB-223	ENST00000556772	UTP20	O75691	2785 aa	Known RBP	5.19	□□□□□ -1.58
NUMB-223	ENST00000556772		A0A1B0GVX0	72 aa		5.19	□□□□□ -1.58
NUMB-223	ENST00000556772	FP248	Q71RG6	208 aa	Predicted RBP	5.19	□□□□□ -1.58
NUMB-223	ENST00000556772	COL12A1	Q99715	3063 aa		5.19	□□□□□ -1.58
NUMB-223	ENST00000556772		Q1T7F1	81 aa		5.19	□□□□□ -1.58
NUMB-223	ENST00000556772	KTN1-AS1	Q86SY8	53 aa		5.18	□□□□□ -1.58
NUMB-223	ENST00000556772	SPRR4	Q96PI1	79 aa		5.17	□□□□□ -1.58
NUMB-223	ENST00000556772	OXT	P01178	125 aa		5.17	□□□□□ -1.58
NUMB-223	ENST00000556772	FAM229B	Q4G0N7	80 aa		5.17	□□□□□ -1.58
NUMB-223	ENST00000556772	IGLV5-37	A0A075B6J1	123 aa		5.17	□□□□□ -1.58
NUMB-223	ENST00000556772	UQCR11	O14957	56 aa		5.17	□□□□□ -1.58
NUMB-223	ENST00000556772	DMBT1	Q9UGM3	2413 aa	Predicted RBP	5.16	□□□□□ -1.58
NUMB-223	ENST00000556772	DMXL2	Q8TDJ6	3036 aa		5.16	□□□□□ -1.58
NUMB-223	ENST00000556772	C9orf163	Q8N9P6	203 aa		5.15	□□□□□ -1.58
NUMB-223	ENST00000556772	ITPR1	Q14643	2758 aa		5.15	□□□□□ -1.59
NUMB-223	ENST00000556772		Q96NJ1	140 aa		5.14	□□□□□ -1.59
NUMB-223	ENST00000556772	ANAPC11	Q9NYG5	84 aa		5.14	□□□□□ -1.59
NUMB-223	ENST00000556772	ATM	Q13315	3056 aa		5.13	□□□□□ -1.59
NUMB-223	ENST00000556772		J3QL48	77 aa		5.13	□□□□□ -1.59
NUMB-223	ENST00000556772	ZNF861P	O60384	105 aa		5.13	□□□□□ -1.59
NUMB-223	ENST00000556772	MIR22HG	Q0VDD5	57 aa		5.13	□□□□□ -1.59
NUMB-223	ENST00000556772	MYO15A	Q9UKN7	3530 aa		5.13	□□□□□ -1.59
NUMB-223	ENST00000556772	TYMSOS	Q8TAI1	123 aa		5.13	□□□□□ -1.59
NUMB-223	ENST00000556772	CDC42SE1	Q9NRR8	79 aa		5.13	□□□□□ -1.59
NUMB-223	ENST00000556772	CNBP	P62633	177 aa	Known RBP	5.12	□□□□□ -1.59
NUMB-223	ENST00000556772	SPTBN5	Q9NRC6	3674 aa	Known RBP	5.12	□□□□□ -1.59
NUMB-223	ENST00000556772	BOD1L1	Q8NFC6	3051 aa		5.11	□□□□□ -1.59
NUMB-223	ENST00000556772	LCA10	Q71F78	164 aa		5.11	□□□□□ -1.59
NUMB-223	ENST00000556772	KALRN	O60229	2985 aa		5.11	□□□□□ -1.59
NUMB-223	ENST00000556772	SSBP3-AS1	Q7Z2R9	100 aa		5.1	□□□□□ -1.59
NUMB-223	ENST00000556772	PRR26	Q8N8Z3	221 aa		5.1	□□□□□ -1.59
NUMB-223	ENST00000556772	IGLV7-46	A0A075B6I9	117 aa		5.09	□□□□□ -1.59
NUMB-223	ENST00000556772	KMT2B	Q9UMN6	2715 aa	Predicted RBP	5.09	□□□□□ -1.6
NUMB-223	ENST00000556772	EYS	Q5T1H1	3165 aa		5.09	□□□□□ -1.6
NUMB-223	ENST00000556772	PSORS1C2	Q9UIG4	136 aa		5.08	□□□□□ -1.6
NUMB-223	ENST00000556772	CRYBG3	Q68DQ2	2970 aa		5.08	□□□□□ -1.6
NUMB-223	ENST00000556772	SPRR1A	P35321	89 aa		5.08	□□□□□ -1.6
NUMB-223	ENST00000556772		Q8N9P0	234 aa	Predicted RBP	5.08	□□□□□ -1.6
NUMB-223	ENST00000556772		A0A087WTM6	91 aa		5.08	□□□□□ -1.6
NUMB-223	ENST00000556772	ZZEF1	O43149	2961 aa		5.07	□□□□□ -1.6
NUMB-223	ENST00000556772	PLA2G1B	P04054	148 aa	Known RBP	5.07	□□□□□ -1.6
NUMB-223	ENST00000556772	SPEN	Q96T58	3664 aa	Known RBP	5.06	□□□□□ -1.6
NUMB-223	ENST00000556772		Q75L30	129 aa		5.06	□□□□□ -1.6
NUMB-223	ENST00000556772	NBEAL2	Q6ZNJ1	2754 aa		5.06	□□□□□ -1.6
NUMB-223	ENST00000556772	DMD	P11532	3685 aa		5.06	□□□□□ -1.6
NUMB-223	ENST00000556772	ADGRG4	Q8IZF6	3080 aa		5.05	□□□□□ -1.6
NUMB-223	ENST00000556772	SPEG	Q15772	3267 aa		5.04	□□□□□ -1.6
NUMB-223	ENST00000556772	IGLV7-43	P04211	117 aa		5.04	□□□□□ -1.6
NUMB-223	ENST00000556772	MMP24-AS1	A0A0U1RRL7	71 aa		5.04	□□□□□ -1.6
NUMB-223	ENST00000556772	APLN	Q9ULZ1	77 aa		5.04	□□□□□ -1.6
NUMB-223	ENST00000556772		Q5VV11	94 aa		5.04	□□□□□ -1.6
NUMB-223	ENST00000556772	KRTAP21-3	Q3LHN1	58 aa		5.03	□□□□□ -1.6
NUMB-223	ENST00000556772	DMXL1	Q9Y485	3027 aa		5.03	□□□□□ -1.6
NUMB-223	ENST00000556772	RBM12B-AS1	Q9P1G2	102 aa		5.03	□□□□□ -1.6
NUMB-223	ENST00000556772	CFAP47	Q6ZTR5	3102 aa		5.03	□□□□□ -1.6
NUMB-223	ENST00000556772	NIPBL	Q6KC79	2804 aa	eCLIP	5.03	□□□□□ -1.6
NUMB-223	ENST00000556772	ZFHX3	Q15911	3703 aa		5.03	□□□□□ -1.6
NUMB-223	ENST00000556772	SPINT4	Q6UDR6	99 aa		5.02	□□□□□ -1.61
NUMB-223	ENST00000556772	LINC01558	Q9Y6Z2	57 aa		5.02	□□□□□ -1.61
NUMB-223	ENST00000556772	KRTAP26-1	Q6PEX3	210 aa		5.01	□□□□□ -1.61
NUMB-223	ENST00000556772	ASH1L	Q9NR48	2969 aa	Known RBP	5.01	□□□□□ -1.61
NUMB-223	ENST00000556772	LINC00472	Q9H8W2	130 aa		5	□□□□□ -1.61
NUMB-223	ENST00000556772	APC	P25054	2843 aa		5	□□□□□ -1.61
NUMB-223	ENST00000556772		Q8N1X5	172 aa		5	□□□□□ -1.61
NUMB-223	ENST00000556772	HRES1	P13985	223 aa		4.99	□□□□□ -1.61
NUMB-223	ENST00000556772	TNP2	Q05952	138 aa		4.99	□□□□□ -1.61
NUMB-223	ENST00000556772	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	4.99	□□□□□ -1.61
NUMB-223	ENST00000556772	LINC00304	Q8N9R0	145 aa		4.98	□□□□□ -1.61
NUMB-223	ENST00000556772	C9orf92	A6NGG3	77 aa		4.98	□□□□□ -1.61
NUMB-223	ENST00000556772	SPRR1B	P22528	89 aa		4.97	□□□□□ -1.61
NUMB-223	ENST00000556772	SMR3B	P02814	79 aa	Predicted RBP	4.96	□□□□□ -1.61
NUMB-223	ENST00000556772	LRBA	P50851	2863 aa		4.96	□□□□□ -1.62
NUMB-223	ENST00000556772	SPINK7	P58062	85 aa		4.95	□□□□□ -1.62
NUMB-223	ENST00000556772	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	4.94	□□□□□ -1.62
NUMB-223	ENST00000556772	PRAC1	Q96KF2	57 aa		4.94	□□□□□ -1.62
NUMB-223	ENST00000556772		H3BS24	57 aa		4.93	□□□□□ -1.62
NUMB-223	ENST00000556772	ZCCHC13	Q8WW36	166 aa	Known RBP	4.93	□□□□□ -1.62
NUMB-223	ENST00000556772	CRIPT	Q9P021	101 aa		4.92	□□□□□ -1.62
NUMB-223	ENST00000556772	MUC3A	Q02505	3323 aa		4.91	□□□□□ -1.62
NUMB-223	ENST00000556772	LINC01554	Q52M75	96 aa		4.91	□□□□□ -1.62
NUMB-223	ENST00000556772	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.91	□□□□□ -1.62
NUMB-223	ENST00000556772	KRTAP1-5	Q9BYS1	174 aa		4.91	□□□□□ -1.62
NUMB-223	ENST00000556772	LCE6A	A0A183	80 aa		4.9	□□□□□ -1.63
NUMB-223	ENST00000556772		Q5W150	140 aa		4.89	□□□□□ -1.63
NUMB-223	ENST00000556772		A0A0D9SG42	100 aa		4.89	□□□□□ -1.63
NUMB-223	ENST00000556772		A0A1B0GU33	70 aa		4.88	□□□□□ -1.63
NUMB-223	ENST00000556772	PLAC8	Q9NZF1	115 aa		4.88	□□□□□ -1.63
NUMB-223	ENST00000556772	CELSR2	Q9HCU4	2923 aa		4.86	□□□□□ -1.63
NUMB-223	ENST00000556772		Q6ZR54	194 aa		4.85	□□□□□ -1.63
NUMB-223	ENST00000556772	ZAN	Q9Y493	2812 aa		4.85	□□□□□ -1.63
NUMB-223	ENST00000556772	CSAG1	Q6PB30	78 aa		4.84	□□□□□ -1.63
NUMB-223	ENST00000556772	LOC400499	M0QZD8	3231 aa		4.82	□□□□□ -1.64
NUMB-223	ENST00000556772	DMAC1	Q96GE9	116 aa		4.82	□□□□□ -1.64
NUMB-223	ENST00000556772	FLG2	Q5D862	2391 aa	Predicted RBP	4.81	□□□□□ -1.64
NUMB-223	ENST00000556772	LINC00483	Q53H64	154 aa		4.81	□□□□□ -1.64
NUMB-223	ENST00000556772	NF1	P21359	2839 aa		4.81	□□□□□ -1.64
NUMB-223	ENST00000556772	DCHS2	Q6V1P9	2916 aa		4.81	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms