RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 COX6B2Q6YFQ2 88 aa-0.86□□□□□ -2.55
SCFD1-218ENST00000556256 ZNF720Q7Z2F6 126 aa-0.86□□□□□ -2.55
SCFD1-218ENST00000556256 S4R3F8 94 aa-0.86□□□□□ -2.55
SCFD1-218ENST00000556256 MAP3K1Q13233 1512 aa-0.86□□□□□ -2.55
SCFD1-218ENST00000556256 LRRC9Q6ZRR7 1453 aa-0.86□□□□□ -2.55
SCFD1-218ENST00000556256 ZNF831Q5JPB2 1677 aa-0.87□□□□□ -2.55
SCFD1-218ENST00000556256 CELSR3Q9NYQ7 3312 aa-0.87□□□□□ -2.55
SCFD1-218ENST00000556256 USP32Q8NFA0 1604 aa-0.87□□□□□ -2.55
SCFD1-218ENST00000556256 NESP48681 1621 aa-0.88□□□□□ -2.55
SCFD1-218ENST00000556256 UQCRHLA0A096LP55 91 aa-0.88□□□□□ -2.55
SCFD1-218ENST00000556256 IQCF6A8MYZ5 107 aa-0.88□□□□□ -2.55
SCFD1-218ENST00000556256 MT1HP80294 61 aa-0.88□□□□□ -2.55
SCFD1-218ENST00000556256 GAFA1Q96PS6 74 aa-0.88□□□□□ -2.55
SCFD1-218ENST00000556256 PLXNC1O60486 1568 aa-0.88□□□□□ -2.55
SCFD1-218ENST00000556256 LINC00158P58513 81 aa-0.89□□□□□ -2.55
SCFD1-218ENST00000556256 DEFA5Q01523 94 aa-0.89□□□□□ -2.55
SCFD1-218ENST00000556256 PRO3102Q9H379 93 aa-0.89□□□□□ -2.55
SCFD1-218ENST00000556256 WIZO95785 1651 aa-0.89□□□□□ -2.55
SCFD1-218ENST00000556256 DNAH17Q9UFH2 4485 aa-0.89□□□□□ -2.55
SCFD1-218ENST00000556256 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.9□□□□□ -2.55
SCFD1-218ENST00000556256 ATP7BP35670 1465 aa-0.9□□□□□ -2.55
SCFD1-218ENST00000556256 TEX14Q8IWB6 1497 aa-0.9□□□□□ -2.55
SCFD1-218ENST00000556256 FYCO1Q9BQS8 1478 aa-0.9□□□□□ -2.55
SCFD1-218ENST00000556256 TRAV21A0A0B4J279 112 aa-0.9□□□□□ -2.55
SCFD1-218ENST00000556256 A0A1B0GUT8 65 aa-0.9□□□□□ -2.55
SCFD1-218ENST00000556256 ATP6V1G2-DDX39BF2Z307 99 aa-0.9□□□□□ -2.55
SCFD1-218ENST00000556256 H0YAA0 97 aa-0.9□□□□□ -2.55
SCFD1-218ENST00000556256 PRLHP81277 87 aa-0.9□□□□□ -2.55
SCFD1-218ENST00000556256 DEFB110Q30KQ9 67 aa-0.9□□□□□ -2.55
SCFD1-218ENST00000556256 KRTAP19-5Q3LI72 72 aa-0.9□□□□□ -2.55
SCFD1-218ENST00000556256 ANKRD26Q9UPS8 1709 aa-0.9□□□□□ -2.55
SCFD1-218ENST00000556256 NEXMIFQ5QGS0 1516 aa-0.9□□□□□ -2.55
SCFD1-218ENST00000556256 NWD1Q149M9 1564 aa-0.91□□□□□ -2.55
SCFD1-218ENST00000556256 HMGN2P05204 90 aaKnown RBP-0.91□□□□□ -2.56
SCFD1-218ENST00000556256 C3orf79P0CE67 100 aa-0.91□□□□□ -2.56
SCFD1-218ENST00000556256 RPL38P63173 70 aaKnown RBP-0.91□□□□□ -2.56
SCFD1-218ENST00000556256 NCMAPQ5T1S8 102 aa-0.91□□□□□ -2.56
SCFD1-218ENST00000556256 TCEAL7Q9BRU2 100 aa-0.91□□□□□ -2.56
SCFD1-218ENST00000556256 DPY30Q9C005 99 aa-0.91□□□□□ -2.56
SCFD1-218ENST00000556256 AKAP12Q02952 1782 aa-0.91□□□□□ -2.56
SCFD1-218ENST00000556256 CHD7Q9P2D1 2997 aa-0.91□□□□□ -2.56
SCFD1-218ENST00000556256 TMEM131LA2VDJ0 1609 aa-0.92□□□□□ -2.56
SCFD1-218ENST00000556256 MYO3AQ8NEV4 1616 aa-0.92□□□□□ -2.56
SCFD1-218ENST00000556256 ANKRD36CQ5JPF3 1778 aa-0.92□□□□□ -2.56
SCFD1-218ENST00000556256 EPRSP07814 1512 aaKnown RBP-0.92□□□□□ -2.56
SCFD1-218ENST00000556256 LINC00032P0C843 101 aa-0.92□□□□□ -2.56
SCFD1-218ENST00000556256 PLGLAQ15195 96 aa-0.92□□□□□ -2.56
SCFD1-218ENST00000556256 WFDC9Q8NEX5 89 aa-0.92□□□□□ -2.56
SCFD1-218ENST00000556256 C20orf78Q9BR46 151 aa-0.92□□□□□ -2.56
SCFD1-218ENST00000556256 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.92□□□□□ -2.56
SCFD1-218ENST00000556256 FANCAO15360 1455 aa-0.92□□□□□ -2.56
SCFD1-218ENST00000556256 ATP10BO94823 1461 aa-0.92□□□□□ -2.56
SCFD1-218ENST00000556256 LRBAP50851 2863 aa-0.93□□□□□ -2.56
SCFD1-218ENST00000556256 DEFB130BP0DP73 79 aa-0.93□□□□□ -2.56
SCFD1-218ENST00000556256 DEFB130AP0DP74 79 aa-0.93□□□□□ -2.56
SCFD1-218ENST00000556256 RBP2P50120 134 aa-0.93□□□□□ -2.56
SCFD1-218ENST00000556256 CNTLNQ9NXG0 1405 aa-0.93□□□□□ -2.56
SCFD1-218ENST00000556256 ARFGEF2Q9Y6D5 1785 aa-0.93□□□□□ -2.56
SCFD1-218ENST00000556256 ADGRG4Q8IZF6 3080 aa-0.94□□□□□ -2.56
SCFD1-218ENST00000556256 DDX60LQ5H9U9 1706 aaKnown RBP-0.94□□□□□ -2.56
SCFD1-218ENST00000556256 DEFB1P60022 68 aa-0.94□□□□□ -2.56
SCFD1-218ENST00000556256 ACBD7Q8N6N7 88 aa-0.94□□□□□ -2.56
SCFD1-218ENST00000556256 DEPDC5O75140 1603 aa-0.95□□□□□ -2.56
SCFD1-218ENST00000556256 PEA15Q15121 130 aa-0.95□□□□□ -2.56
SCFD1-218ENST00000556256 DNAH5Q8TE73 4624 aa-0.95□□□□□ -2.56
SCFD1-218ENST00000556256 SPTAN1Q13813 2472 aaKnown RBP-0.96□□□□□ -2.56
SCFD1-218ENST00000556256 MYO9AB2RTY4 2548 aa-0.96□□□□□ -2.56
SCFD1-218ENST00000556256 NCOA2Q15596 1464 aa-0.96□□□□□ -2.56
SCFD1-218ENST00000556256 ABCC10Q5T3U5 1492 aa-0.96□□□□□ -2.56
SCFD1-218ENST00000556256 LYNX1G3V0Z9 82 aa-0.96□□□□□ -2.56
SCFD1-218ENST00000556256 CYB5AP00167 134 aa-0.96□□□□□ -2.56
SCFD1-218ENST00000556256 ACYP1P07311 99 aa-0.96□□□□□ -2.56
SCFD1-218ENST00000556256 DEFB106AQ8N104 65 aa-0.96□□□□□ -2.56
SCFD1-218ENST00000556256 DNAH10Q8IVF4 4471 aa-0.97□□□□□ -2.56
SCFD1-218ENST00000556256 PLCH1Q4KWH8 1693 aa-0.97□□□□□ -2.56
SCFD1-218ENST00000556256 EYSQ5T1H1 3165 aa-0.97□□□□□ -2.56
SCFD1-218ENST00000556256 TJP1Q07157 1748 aa-0.97□□□□□ -2.56
SCFD1-218ENST00000556256 ITPR1Q14643 2758 aa-0.97□□□□□ -2.56
SCFD1-218ENST00000556256 LCE6AA0A183 80 aa-0.97□□□□□ -2.56
SCFD1-218ENST00000556256 MYMXA0A1B0GTQ4 84 aa-0.97□□□□□ -2.56
SCFD1-218ENST00000556256 K7EP34 96 aa-0.97□□□□□ -2.56
SCFD1-218ENST00000556256 M0R143 59 aa-0.97□□□□□ -2.56
SCFD1-218ENST00000556256 IAPPP10997 89 aa-0.97□□□□□ -2.56
SCFD1-218ENST00000556256 SMIM11AP58511 58 aa-0.97□□□□□ -2.56
SCFD1-218ENST00000556256 SNHG12Q9BXW3 62 aa-0.97□□□□□ -2.56
SCFD1-218ENST00000556256 CEP295Q9C0D2 2601 aa-0.98□□□□□ -2.57
SCFD1-218ENST00000556256 TRRAPQ9Y4A5 3859 aa-0.98□□□□□ -2.57
SCFD1-218ENST00000556256 MAGI3Q5TCQ9 1506 aa-0.98□□□□□ -2.57
SCFD1-218ENST00000556256 DIP2BQ9P265 1576 aa-0.98□□□□□ -2.57
SCFD1-218ENST00000556256 SMR3BP02814 79 aaPredicted RBP-0.98□□□□□ -2.57
SCFD1-218ENST00000556256 IFI6P09912 130 aa-0.98□□□□□ -2.57
SCFD1-218ENST00000556256 CSMD1Q96PZ7 3565 aa-0.98□□□□□ -2.57
SCFD1-218ENST00000556256 PLIN4Q96Q06 1357 aa-0.98□□□□□ -2.57
SCFD1-218ENST00000556256 CEP162Q5TB80 1403 aa-0.98□□□□□ -2.57
SCFD1-218ENST00000556256 PEG3Q9GZU2 1588 aa-0.99□□□□□ -2.57
SCFD1-218ENST00000556256 GYPAP02724 150 aa-0.99□□□□□ -2.57
SCFD1-218ENST00000556256 MT1XP80297 61 aa-0.99□□□□□ -2.57
SCFD1-218ENST00000556256 ITSN1Q15811 1721 aa-0.99□□□□□ -2.57
SCFD1-218ENST00000556256 PARP4Q9UKK3 1724 aaKnown RBP-1□□□□□ -2.57
SCFD1-218ENST00000556256 TOGARAM1Q9Y4F4 1720 aa-1.01□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms