RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.55□□□□□ -1.68
TDP1-214ENST00000556063 PRR26Q8N8Z3 221 aa4.55□□□□□ -1.68
TDP1-214ENST00000556063 ST20-AS1Q8NBB2 130 aa4.55□□□□□ -1.68
TDP1-214ENST00000556063 DEFB105AQ8NG35 78 aa4.55□□□□□ -1.68
TDP1-214ENST00000556063 LAMTOR3Q9UHA4 124 aa4.55□□□□□ -1.68
TDP1-214ENST00000556063 PCP4L1A6NKN8 68 aa4.54□□□□□ -1.68
TDP1-214ENST00000556063 DNAL4O96015 105 aa4.54□□□□□ -1.68
TDP1-214ENST00000556063 SPRR1BP22528 89 aa4.54□□□□□ -1.68
TDP1-214ENST00000556063 TYMSOSQ8TAI1 123 aa4.54□□□□□ -1.68
TDP1-214ENST00000556063 ANAPC11Q9NYG5 84 aa4.54□□□□□ -1.68
TDP1-214ENST00000556063 FAT1Q14517 4588 aa4.54□□□□□ -1.68
TDP1-214ENST00000556063 PCLOQ9Y6V0 5065 aa4.54□□□□□ -1.68
TDP1-214ENST00000556063 VPS13BQ7Z7G8 4022 aa4.54□□□□□ -1.68
TDP1-214ENST00000556063 IGLV5-48A0A075B6I7 105 aa4.53□□□□□ -1.68
TDP1-214ENST00000556063 H3BQ85 93 aa4.53□□□□□ -1.68
TDP1-214ENST00000556063 KRTAP10-8P60410 259 aa4.53□□□□□ -1.68
TDP1-214ENST00000556063 Q6ZQY7 126 aa4.53□□□□□ -1.68
TDP1-214ENST00000556063 PPDPFLQ8WWR9 84 aa4.53□□□□□ -1.68
TDP1-214ENST00000556063 A0A087X002 238 aa4.52□□□□□ -1.69
TDP1-214ENST00000556063 F8WEM9 126 aa4.52□□□□□ -1.69
TDP1-214ENST00000556063 COL5A1-AS1Q5SY13 56 aa4.52□□□□□ -1.69
TDP1-214ENST00000556063 SSBP3-AS1Q7Z2R9 100 aa4.52□□□□□ -1.69
TDP1-214ENST00000556063 IGLV9-49A0A0B4J1Y8 123 aa4.51□□□□□ -1.69
TDP1-214ENST00000556063 TRACP01848 142 aa4.51□□□□□ -1.69
TDP1-214ENST00000556063 MT1HL1P0DM35 61 aa4.51□□□□□ -1.69
TDP1-214ENST00000556063 C9orf153Q5TBE3 101 aa4.51□□□□□ -1.69
TDP1-214ENST00000556063 CLEC2BQ92478 149 aa4.51□□□□□ -1.69
TDP1-214ENST00000556063 FAM218AQ96MZ4 157 aa4.51□□□□□ -1.69
TDP1-214ENST00000556063 SNHG12Q9BXW3 62 aa4.51□□□□□ -1.69
TDP1-214ENST00000556063 TRBV20-1A0A075B6N2 111 aa4.5□□□□□ -1.69
TDP1-214ENST00000556063 C9orf118A6NHY6 69 aa4.5□□□□□ -1.69
TDP1-214ENST00000556063 H3BUT2 72 aa4.5□□□□□ -1.69
TDP1-214ENST00000556063 MOBPQ13875 183 aa4.5□□□□□ -1.69
TDP1-214ENST00000556063 ATXN8Q156A1 80 aa4.5□□□□□ -1.69
TDP1-214ENST00000556063 KRTAP13-2Q52LG2 175 aa4.5□□□□□ -1.69
TDP1-214ENST00000556063 SPAG11AQ6PDA7 123 aa4.5□□□□□ -1.69
TDP1-214ENST00000556063 Q8N377 158 aa4.5□□□□□ -1.69
TDP1-214ENST00000556063 C3orf22Q8N5N4 141 aa4.5□□□□□ -1.69
TDP1-214ENST00000556063 Q8NBF4 154 aa4.5□□□□□ -1.69
TDP1-214ENST00000556063 ORMDL1Q9P0S3 153 aa4.5□□□□□ -1.69
TDP1-214ENST00000556063 LST1O00453 97 aa4.49□□□□□ -1.69
TDP1-214ENST00000556063 LINC01547P58512 204 aaPredicted RBP4.49□□□□□ -1.69
TDP1-214ENST00000556063 LINC00304Q8N9R0 145 aa4.49□□□□□ -1.69
TDP1-214ENST00000556063 NAA38Q9BRA0 125 aaKnown RBP4.49□□□□□ -1.69
TDP1-214ENST00000556063 TMEM256-PLSCR3K7ERE1 68 aa4.48□□□□□ -1.69
TDP1-214ENST00000556063 TAX1BP3O14907 124 aa4.48□□□□□ -1.69
TDP1-214ENST00000556063 FABP2P12104 132 aa4.48□□□□□ -1.69
TDP1-214ENST00000556063 ABCA13Q86UQ4 5058 aa4.47□□□□□ -1.69
TDP1-214ENST00000556063 A0A1W2PPM0 123 aa4.47□□□□□ -1.69
TDP1-214ENST00000556063 Q6JHZ5 121 aa4.47□□□□□ -1.69
TDP1-214ENST00000556063 SMIM29Q86T20 159 aa4.47□□□□□ -1.69
TDP1-214ENST00000556063 TCL1BO95988 128 aa4.46□□□□□ -1.7
TDP1-214ENST00000556063 NDUFV3P56181 108 aaKnown RBP4.46□□□□□ -1.7
TDP1-214ENST00000556063 SPINK1P00995 79 aa4.45□□□□□ -1.7
TDP1-214ENST00000556063 BAALC-AS2P0C853 105 aa4.45□□□□□ -1.7
TDP1-214ENST00000556063 UBE2V1Q13404 147 aa4.45□□□□□ -1.7
TDP1-214ENST00000556063 IGLV8-61A0A075B6I0 122 aa4.44□□□□□ -1.7
TDP1-214ENST00000556063 CD164Q04900 197 aa4.44□□□□□ -1.7
TDP1-214ENST00000556063 SPCS1Q9Y6A9 102 aa4.44□□□□□ -1.7
TDP1-214ENST00000556063 H3BMG7 143 aa4.43□□□□□ -1.7
TDP1-214ENST00000556063 RPS29P62273 56 aaKnown RBP4.43□□□□□ -1.7
TDP1-214ENST00000556063 C9JAW5 83 aa4.42□□□□□ -1.7
TDP1-214ENST00000556063 ANKRD29Q8N6D5 301 aa4.42□□□□□ -1.7
TDP1-214ENST00000556063 LIMD2Q9BT23 127 aa4.42□□□□□ -1.7
TDP1-214ENST00000556063 IGFL1Q6UW32 110 aa4.41□□□□□ -1.7
TDP1-214ENST00000556063 GTF2H5Q6ZYL4 71 aa4.41□□□□□ -1.7
TDP1-214ENST00000556063 PKHD1L1Q86WI1 4243 aa4.41□□□□□ -1.7
TDP1-214ENST00000556063 JMJD7-PLA2G4BH0Y9G9 81 aa4.4□□□□□ -1.71
TDP1-214ENST00000556063 H3BT86 120 aa4.4□□□□□ -1.71
TDP1-214ENST00000556063 RBM3P98179 157 aaKnown RBP4.4□□□□□ -1.71
TDP1-214ENST00000556063 HRCT1Q6UXD1 115 aa4.4□□□□□ -1.71
TDP1-214ENST00000556063 K7EP34 96 aa4.39□□□□□ -1.71
TDP1-214ENST00000556063 TEN1Q86WV5 123 aa4.39□□□□□ -1.71
TDP1-214ENST00000556063 DSCR8Q96T75 97 aa4.39□□□□□ -1.71
TDP1-214ENST00000556063 MYCBP2O75592 4640 aa4.39□□□□□ -1.71
TDP1-214ENST00000556063 PDE6GP18545 87 aa4.38□□□□□ -1.71
TDP1-214ENST00000556063 Q5XG85 94 aa4.38□□□□□ -1.71
TDP1-214ENST00000556063 Q6Q795 121 aa4.38□□□□□ -1.71
TDP1-214ENST00000556063 LRP1Q07954 4544 aaKnown RBP4.38□□□□□ -1.71
TDP1-214ENST00000556063 A0A0G2JQZ4 141 aa4.37□□□□□ -1.71
TDP1-214ENST00000556063 TRBV7-7A0A0K0K1E9 115 aa4.37□□□□□ -1.71
TDP1-214ENST00000556063 A0A1B0GV72 72 aa4.37□□□□□ -1.71
TDP1-214ENST00000556063 PRR4Q16378 134 aa4.37□□□□□ -1.71
TDP1-214ENST00000556063 SS18L2Q9UHA2 77 aa4.37□□□□□ -1.71
TDP1-214ENST00000556063 TRBV7-4A0A0J9YYF1 115 aa4.36□□□□□ -1.71
TDP1-214ENST00000556063 FP248Q71RG6 208 aaPredicted RBP4.36□□□□□ -1.71
TDP1-214ENST00000556063 CCKP06307 115 aa4.35□□□□□ -1.71
TDP1-214ENST00000556063 MTURNQ8N3F0 131 aa4.35□□□□□ -1.71
TDP1-214ENST00000556063 VPS25Q9BRG1 176 aa4.35□□□□□ -1.71
TDP1-214ENST00000556063 IGLV7-46A0A075B6I9 117 aa4.34□□□□□ -1.71
TDP1-214ENST00000556063 LOC110117498A0A087WWA1 95 aa4.34□□□□□ -1.71
TDP1-214ENST00000556063 F8W1H4 67 aa4.34□□□□□ -1.71
TDP1-214ENST00000556063 RETNLBQ9BQ08 111 aa4.34□□□□□ -1.71
TDP1-214ENST00000556063 A0A087WSZ3 146 aa4.33□□□□□ -1.72
TDP1-214ENST00000556063 A0A1B0GW54 56 aa4.33□□□□□ -1.72
TDP1-214ENST00000556063 A0A1W2PNM2 257 aa4.33□□□□□ -1.72
TDP1-214ENST00000556063 ASB16-AS1Q495Z4 193 aa4.33□□□□□ -1.72
TDP1-214ENST00000556063 LCE4AQ5TA78 99 aa4.33□□□□□ -1.72
TDP1-214ENST00000556063 OBSCN-AS1Q96MR7 158 aa4.33□□□□□ -1.72
TDP1-214ENST00000556063 C14orf132Q9NPU4 83 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms