RNA–Protein interactions for RNA: ENST00000555854.1

VIPAS39-207, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5

Gene VIPAS39, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-207ENST00000555854 COX6CP09669 75 aa5.31□□□□□ -1.56
VIPAS39-207ENST00000555854 TPRXLQ17RH7 258 aa5.31□□□□□ -1.56
VIPAS39-207ENST00000555854 SOSTDC1Q6X4U4 206 aa5.31□□□□□ -1.56
VIPAS39-207ENST00000555854 B5MCH6 92 aa5.3□□□□□ -1.56
VIPAS39-207ENST00000555854 H3BMG7 143 aa5.3□□□□□ -1.56
VIPAS39-207ENST00000555854 CFC1BP0CG36 223 aa5.3□□□□□ -1.56
VIPAS39-207ENST00000555854 CFC1P0CG37 223 aa5.3□□□□□ -1.56
VIPAS39-207ENST00000555854 LINC00483Q53H64 154 aa5.3□□□□□ -1.56
VIPAS39-207ENST00000555854 LCE5AQ5TCM9 118 aa5.3□□□□□ -1.56
VIPAS39-207ENST00000555854 VPS25Q9BRG1 176 aa5.3□□□□□ -1.56
VIPAS39-207ENST00000555854 Q9BRP9 147 aa5.3□□□□□ -1.56
VIPAS39-207ENST00000555854 SCGB1C2P0DMR2 95 aa5.29□□□□□ -1.56
VIPAS39-207ENST00000555854 MUSTN1Q8IVN3 82 aa5.29□□□□□ -1.56
VIPAS39-207ENST00000555854 IGLV7-46A0A075B6I9 117 aa5.28□□□□□ -1.56
VIPAS39-207ENST00000555854 TRBV10-2A0A0K0K1G8 114 aa5.28□□□□□ -1.56
VIPAS39-207ENST00000555854 ETDCA0A1B0GVM5 59 aa5.28□□□□□ -1.56
VIPAS39-207ENST00000555854 A4D1N5 150 aa5.28□□□□□ -1.56
VIPAS39-207ENST00000555854 K7ERJ3 54 aa5.28□□□□□ -1.56
VIPAS39-207ENST00000555854 IGLV6-57P01721 117 aa5.28□□□□□ -1.56
VIPAS39-207ENST00000555854 ADAMTSL4-AS1Q5T5F5 129 aa5.28□□□□□ -1.56
VIPAS39-207ENST00000555854 Q8NBF4 154 aa5.28□□□□□ -1.56
VIPAS39-207ENST00000555854 ZNF706Q9Y5V0 76 aaPredicted RBP5.28□□□□□ -1.56
VIPAS39-207ENST00000555854 LITAFQ99732 161 aa5.27□□□□□ -1.57
VIPAS39-207ENST00000555854 KRTAP9-3Q9BYQ3 159 aa5.27□□□□□ -1.57
VIPAS39-207ENST00000555854 NDUFC2O95298 119 aa5.26□□□□□ -1.57
VIPAS39-207ENST00000555854 PSMB2P49721 201 aa5.26□□□□□ -1.57
VIPAS39-207ENST00000555854 NPC2P61916 151 aa5.26□□□□□ -1.57
VIPAS39-207ENST00000555854 ATXN8Q156A1 80 aa5.26□□□□□ -1.57
VIPAS39-207ENST00000555854 Q6ZRX8 168 aa5.26□□□□□ -1.57
VIPAS39-207ENST00000555854 NAA38Q9BRA0 125 aaKnown RBP5.26□□□□□ -1.57
VIPAS39-207ENST00000555854 PRO0461Q9UI25 63 aa5.26□□□□□ -1.57
VIPAS39-207ENST00000555854 SCGB1A1P11684 91 aa5.25□□□□□ -1.57
VIPAS39-207ENST00000555854 MOBPQ13875 183 aa5.25□□□□□ -1.57
VIPAS39-207ENST00000555854 GAGE2AQ6NT46 116 aa5.25□□□□□ -1.57
VIPAS39-207ENST00000555854 SPAG11AQ6PDA7 123 aa5.25□□□□□ -1.57
VIPAS39-207ENST00000555854 TEN1Q86WV5 123 aa5.25□□□□□ -1.57
VIPAS39-207ENST00000555854 PPDPFLQ8WWR9 84 aa5.25□□□□□ -1.57
VIPAS39-207ENST00000555854 TRAV23DV6A0A075B6W5 121 aa5.24□□□□□ -1.57
VIPAS39-207ENST00000555854 KRTAP13-3Q3SY46 172 aa5.24□□□□□ -1.57
VIPAS39-207ENST00000555854 CDIP1Q9H305 208 aa5.24□□□□□ -1.57
VIPAS39-207ENST00000555854 IGLV9-49A0A0B4J1Y8 123 aa5.23□□□□□ -1.57
VIPAS39-207ENST00000555854 PCP4P48539 62 aa5.23□□□□□ -1.57
VIPAS39-207ENST00000555854 Q1RN00 199 aa5.23□□□□□ -1.57
VIPAS39-207ENST00000555854 ETDBQ3ZM63 59 aa5.23□□□□□ -1.57
VIPAS39-207ENST00000555854 FP248Q71RG6 208 aaPredicted RBP5.23□□□□□ -1.57
VIPAS39-207ENST00000555854 SIGMAR1Q99720 223 aa5.23□□□□□ -1.57
VIPAS39-207ENST00000555854 TRAV13-2A0A0B4J235 113 aa5.22□□□□□ -1.57
VIPAS39-207ENST00000555854 H3BT86 120 aa5.22□□□□□ -1.57
VIPAS39-207ENST00000555854 ZNF73O43830 326 aaPredicted RBP5.22□□□□□ -1.57
VIPAS39-207ENST00000555854 TCL1BO95988 128 aa5.22□□□□□ -1.57
VIPAS39-207ENST00000555854 ST20-AS1Q8NBB2 130 aa5.22□□□□□ -1.57
VIPAS39-207ENST00000555854 LINC00308Q8TCZ7 52 aa5.22□□□□□ -1.57
VIPAS39-207ENST00000555854 SPINK1P00995 79 aa5.21□□□□□ -1.58
VIPAS39-207ENST00000555854 S100A7L2Q5SY68 101 aa5.21□□□□□ -1.58
VIPAS39-207ENST00000555854 Q8N377 158 aa5.21□□□□□ -1.58
VIPAS39-207ENST00000555854 KRTAP4-1Q9BYQ7 146 aa5.21□□□□□ -1.58
VIPAS39-207ENST00000555854 A0A0U1RQV1 116 aa5.2□□□□□ -1.58
VIPAS39-207ENST00000555854 SLC25A20O43772 301 aa5.2□□□□□ -1.58
VIPAS39-207ENST00000555854 RPS29P62273 56 aaKnown RBP5.2□□□□□ -1.58
VIPAS39-207ENST00000555854 ANKRD29Q8N6D5 301 aa5.2□□□□□ -1.58
VIPAS39-207ENST00000555854 H0YGX0 51 aa5.19□□□□□ -1.58
VIPAS39-207ENST00000555854 SSBP3-AS1Q7Z2R9 100 aa5.19□□□□□ -1.58
VIPAS39-207ENST00000555854 MTURNQ8N3F0 131 aa5.19□□□□□ -1.58
VIPAS39-207ENST00000555854 C9JAW5 83 aa5.18□□□□□ -1.58
VIPAS39-207ENST00000555854 LST1O00453 97 aa5.18□□□□□ -1.58
VIPAS39-207ENST00000555854 TRACP01848 142 aa5.18□□□□□ -1.58
VIPAS39-207ENST00000555854 H3BS24 57 aa5.17□□□□□ -1.58
VIPAS39-207ENST00000555854 TRIAP1O43715 76 aa5.17□□□□□ -1.58
VIPAS39-207ENST00000555854 ACYP1P07311 99 aa5.17□□□□□ -1.58
VIPAS39-207ENST00000555854 SPRR1BP22528 89 aa5.17□□□□□ -1.58
VIPAS39-207ENST00000555854 KRTAP19-4Q3LI73 84 aa5.17□□□□□ -1.58
VIPAS39-207ENST00000555854 ASB16-AS1Q495Z4 193 aa5.17□□□□□ -1.58
VIPAS39-207ENST00000555854 A0A1B0GX51 115 aa5.16□□□□□ -1.58
VIPAS39-207ENST00000555854 SNCGO76070 127 aa5.16□□□□□ -1.58
VIPAS39-207ENST00000555854 C9orf153Q5TBE3 101 aa5.16□□□□□ -1.58
VIPAS39-207ENST00000555854 FAM240AA0A1B0GVK7 77 aa5.15□□□□□ -1.59
VIPAS39-207ENST00000555854 H7C2G1 150 aa5.15□□□□□ -1.59
VIPAS39-207ENST00000555854 ELOF1P60002 83 aaKnown RBP5.15□□□□□ -1.59
VIPAS39-207ENST00000555854 H3BQ85 93 aa5.14□□□□□ -1.59
VIPAS39-207ENST00000555854 C6orf99Q4VX62 202 aa5.14□□□□□ -1.59
VIPAS39-207ENST00000555854 OR13C6PQ8NH95 151 aa5.14□□□□□ -1.59
VIPAS39-207ENST00000555854 FLGP20930 4061 aaPredicted RBP5.13□□□□□ -1.59
VIPAS39-207ENST00000555854 COX7BP24311 80 aa5.12□□□□□ -1.59
VIPAS39-207ENST00000555854 LINC01547P58512 204 aaPredicted RBP5.12□□□□□ -1.59
VIPAS39-207ENST00000555854 DHRS4-AS1Q9P1J3 65 aa5.12□□□□□ -1.59
VIPAS39-207ENST00000555854 C21orf62-AS1Q17RA5 79 aa5.11□□□□□ -1.59
VIPAS39-207ENST00000555854 Q6Q795 121 aa5.11□□□□□ -1.59
VIPAS39-207ENST00000555854 SMIM29Q86T20 159 aa5.11□□□□□ -1.59
VIPAS39-207ENST00000555854 BAALC-AS2P0C853 105 aa5.1□□□□□ -1.59
VIPAS39-207ENST00000555854 HRCT1Q6UXD1 115 aa5.1□□□□□ -1.59
VIPAS39-207ENST00000555854 IGLV5-48A0A075B6I7 105 aa5.09□□□□□ -1.59
VIPAS39-207ENST00000555854 A0A0G2JQZ4 141 aa5.09□□□□□ -1.59
VIPAS39-207ENST00000555854 A0A1B0GV72 72 aa5.09□□□□□ -1.59
VIPAS39-207ENST00000555854 DNAL4O96015 105 aa5.09□□□□□ -1.59
VIPAS39-207ENST00000555854 SEC61BP60468 96 aaKnown RBP5.09□□□□□ -1.59
VIPAS39-207ENST00000555854 KRTAP19-2Q3LHN2 52 aa5.09□□□□□ -1.59
VIPAS39-207ENST00000555854 IMUPQ9GZP8 106 aa5.09□□□□□ -1.59
VIPAS39-207ENST00000555854 FSIP2Q5CZC0 6907 aa5.08□□□□□ -1.6
VIPAS39-207ENST00000555854 TRBV7-6A0A0J9YX20 115 aa5.08□□□□□ -1.6
VIPAS39-207ENST00000555854 CLEC2BQ92478 149 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms