RNA–Protein interactions for RNA: ENST00000555737.5

RCCD1-204, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-204ENST00000555737 PMAIP1Q13794 54 aa11.3□□□□□ -0.6
RCCD1-204ENST00000555737 LINC00208Q96KT6 92 aa11.3□□□□□ -0.6
RCCD1-204ENST00000555737 KRTAP4-16G5E9R7 235 aaPredicted RBP11.3□□□□□ -0.6
RCCD1-204ENST00000555737 IGFL1Q6UW32 110 aa11.29□□□□□ -0.6
RCCD1-204ENST00000555737 CHTF8P0CG12 524 aa11.29□□□□□ -0.6
RCCD1-204ENST00000555737 DNAH10OSP0CZ25 163 aa11.28□□□□□ -0.6
RCCD1-204ENST00000555737 TNP2Q05952 138 aa11.28□□□□□ -0.6
RCCD1-204ENST00000555737 UBE2AP49459 152 aa11.25□□□□□ -0.61
RCCD1-204ENST00000555737 hDV103S1A0JD37 113 aa11.25□□□□□ -0.61
RCCD1-204ENST00000555737 SPRR1AP35321 89 aa11.22□□□□□ -0.61
RCCD1-204ENST00000555737 SPRR4Q96PI1 79 aa11.22□□□□□ -0.61
RCCD1-204ENST00000555737 PHF5AQ7RTV0 110 aaKnown RBP11.21□□□□□ -0.61
RCCD1-204ENST00000555737 MP68P56378 58 aa11.2□□□□□ -0.62
RCCD1-204ENST00000555737 H0Y9J4 135 aa11.2□□□□□ -0.62
RCCD1-204ENST00000555737 TLX1NBP0CAT3 122 aa11.2□□□□□ -0.62
RCCD1-204ENST00000555737 LYSTQ99698 3801 aa11.2□□□□□ -0.62
RCCD1-204ENST00000555737 KRTAP24-1Q3LI83 254 aa11.18□□□□□ -0.62
RCCD1-204ENST00000555737 A8MUN3 132 aa11.17□□□□□ -0.62
RCCD1-204ENST00000555737 DNAH10Q8IVF4 4471 aa11.17□□□□□ -0.62
RCCD1-204ENST00000555737 A8MU10 97 aa11.16□□□□□ -0.62
RCCD1-204ENST00000555737 KRTAP11-1Q8IUC1 163 aa11.16□□□□□ -0.62
RCCD1-204ENST00000555737 TRAV22A0A0B4J277 110 aa11.15□□□□□ -0.62
RCCD1-204ENST00000555737 CASC2Q6XLA1 102 aa11.15□□□□□ -0.62
RCCD1-204ENST00000555737 KRTAP1-5Q9BYS1 174 aa11.14□□□□□ -0.63
RCCD1-204ENST00000555737 PLA2G2DQ9UNK4 145 aa11.14□□□□□ -0.63
RCCD1-204ENST00000555737 H0Y9P7 68 aa11.14□□□□□ -0.63
RCCD1-204ENST00000555737 UBE2DNLQ8IWF7 75 aa11.14□□□□□ -0.63
RCCD1-204ENST00000555737 ZCCHC13Q8WW36 166 aaKnown RBP11.12□□□□□ -0.63
RCCD1-204ENST00000555737 IGLV5-37A0A075B6J1 123 aa11.11□□□□□ -0.63
RCCD1-204ENST00000555737 PCOTHQ58A44 107 aa11.11□□□□□ -0.63
RCCD1-204ENST00000555737 IGLV9-49A0A0B4J1Y8 123 aa11.1□□□□□ -0.63
RCCD1-204ENST00000555737 B9D2Q9BPU9 175 aa11.08□□□□□ -0.64
RCCD1-204ENST00000555737 PRR15Q8IV56 129 aa11.08□□□□□ -0.64
RCCD1-204ENST00000555737 A0A1B0GW54 56 aa11.07□□□□□ -0.64
RCCD1-204ENST00000555737 LCE6AA0A183 80 aa11.06□□□□□ -0.64
RCCD1-204ENST00000555737 NDUFS5O43920 106 aa11.06□□□□□ -0.64
RCCD1-204ENST00000555737 CD164Q04900 197 aa11.06□□□□□ -0.64
RCCD1-204ENST00000555737 C16orf90A8MZG2 172 aa11.04□□□□□ -0.64
RCCD1-204ENST00000555737 CNBPP62633 177 aaKnown RBP11.04□□□□□ -0.64
RCCD1-204ENST00000555737 CHKB-CPT1BH3BT56 60 aa11.03□□□□□ -0.64
RCCD1-204ENST00000555737 SPTSSBQ8NFR3 76 aa11.03□□□□□ -0.64
RCCD1-204ENST00000555737 NDUFB1O75438 58 aa11.02□□□□□ -0.64
RCCD1-204ENST00000555737 PRR15LQ9BU68 103 aa11.02□□□□□ -0.65
RCCD1-204ENST00000555737 Q1T7F1 81 aa11□□□□□ -0.65
RCCD1-204ENST00000555737 ANAPC11Q9NYG5 84 aa10.99□□□□□ -0.65
RCCD1-204ENST00000555737 PANO1I0J062 215 aa10.98□□□□□ -0.65
RCCD1-204ENST00000555737 K7EIL1 84 aa10.98□□□□□ -0.65
RCCD1-204ENST00000555737 A8MWP4 228 aa10.96□□□□□ -0.66
RCCD1-204ENST00000555737 KRTAP29-1A8MX34 341 aaPredicted RBP10.95□□□□□ -0.66
RCCD1-204ENST00000555737 CYP4F30PQ9H0H9 118 aa10.95□□□□□ -0.66
RCCD1-204ENST00000555737 IGHV6-1A0A0B4J1U7 121 aa10.94□□□□□ -0.66
RCCD1-204ENST00000555737 LINC00472Q9H8W2 130 aa10.91□□□□□ -0.66
RCCD1-204ENST00000555737 Q5VV11 94 aa10.91□□□□□ -0.66
RCCD1-204ENST00000555737 SPINK6Q6UWN8 80 aa10.91□□□□□ -0.66
RCCD1-204ENST00000555737 RBM12B-AS1Q9P1G2 102 aa10.91□□□□□ -0.66
RCCD1-204ENST00000555737 SPAG11AQ6PDA7 123 aa10.89□□□□□ -0.67
RCCD1-204ENST00000555737 A6NED7 52 aa10.89□□□□□ -0.67
RCCD1-204ENST00000555737 C4orf48Q5BLP8 95 aa10.88□□□□□ -0.67
RCCD1-204ENST00000555737 COA5Q86WW8 74 aa10.88□□□□□ -0.67
RCCD1-204ENST00000555737 Q8N9P0 234 aaPredicted RBP10.87□□□□□ -0.67
RCCD1-204ENST00000555737 DNAH9Q9NYC9 4486 aa10.87□□□□□ -0.67
RCCD1-204ENST00000555737 IGLV8-61A0A075B6I0 122 aa10.87□□□□□ -0.67
RCCD1-204ENST00000555737 MMP24-AS1A0A0U1RRL7 71 aa10.86□□□□□ -0.67
RCCD1-204ENST00000555737 CMYA5Q8N3K9 4069 aa10.85□□□□□ -0.67
RCCD1-204ENST00000555737 HUWE1Q7Z6Z7 4374 aaKnown RBP10.85□□□□□ -0.67
RCCD1-204ENST00000555737 MOBPQ13875 183 aa10.82□□□□□ -0.68
RCCD1-204ENST00000555737 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.82□□□□□ -0.68
RCCD1-204ENST00000555737 CDK2AP2O75956 126 aa10.82□□□□□ -0.68
RCCD1-204ENST00000555737 C9orf163Q8N9P6 203 aa10.79□□□□□ -0.68
RCCD1-204ENST00000555737 TGP01266 2768 aa10.79□□□□□ -0.68
RCCD1-204ENST00000555737 DNAH7Q8WXX0 4024 aa10.79□□□□□ -0.68
RCCD1-204ENST00000555737 DNAH1Q9P2D7 4330 aa10.79□□□□□ -0.68
RCCD1-204ENST00000555737 A0A087X002 238 aa10.79□□□□□ -0.68
RCCD1-204ENST00000555737 NOTCH2NLQ7Z3S9 236 aa10.79□□□□□ -0.68
RCCD1-204ENST00000555737 RETNLBQ9BQ08 111 aa10.78□□□□□ -0.68
RCCD1-204ENST00000555737 KTN1-AS1Q86SY8 53 aa10.77□□□□□ -0.68
RCCD1-204ENST00000555737 C14orf177Q52M58 125 aa10.77□□□□□ -0.69
RCCD1-204ENST00000555737 LIMD2Q9BT23 127 aa10.76□□□□□ -0.69
RCCD1-204ENST00000555737 SPANXA2-OT1Q8N9U9 137 aa10.75□□□□□ -0.69
RCCD1-204ENST00000555737 C8orf17Q9NRJ1 99 aa10.75□□□□□ -0.69
RCCD1-204ENST00000555737 MDFIQ99750 246 aa10.74□□□□□ -0.69
RCCD1-204ENST00000555737 APLNQ9ULZ1 77 aa10.74□□□□□ -0.69
RCCD1-204ENST00000555737 SPRR1BP22528 89 aa10.73□□□□□ -0.69
RCCD1-204ENST00000555737 LCA10Q71F78 164 aa10.72□□□□□ -0.69
RCCD1-204ENST00000555737 H3BPC8 53 aa10.72□□□□□ -0.69
RCCD1-204ENST00000555737 NBDYA0A0U1RRE5 68 aa10.7□□□□□ -0.7
RCCD1-204ENST00000555737 IGLV7-46A0A075B6I9 117 aa10.69□□□□□ -0.7
RCCD1-204ENST00000555737 Q96NJ1 140 aa10.69□□□□□ -0.7
RCCD1-204ENST00000555737 CIRBP-AS1Q8TBR5 109 aa10.69□□□□□ -0.7
RCCD1-204ENST00000555737 PRR26Q8N8Z3 221 aa10.68□□□□□ -0.7
RCCD1-204ENST00000555737 PSORS1C2Q9UIG4 136 aa10.67□□□□□ -0.7
RCCD1-204ENST00000555737 A0A1B0GVX0 72 aa10.65□□□□□ -0.7
RCCD1-204ENST00000555737 FRAS1Q86XX4 4008 aa10.63□□□□□ -0.71
RCCD1-204ENST00000555737 HRES1P13985 223 aa10.63□□□□□ -0.71
RCCD1-204ENST00000555737 MRPL34Q9BQ48 92 aaKnown RBP10.63□□□□□ -0.71
RCCD1-204ENST00000555737 SPINK7P58062 85 aa10.63□□□□□ -0.71
RCCD1-204ENST00000555737 FBN3Q75N90 2809 aa10.62□□□□□ -0.71
RCCD1-204ENST00000555737 DNAH3Q8TD57 4116 aa10.62□□□□□ -0.71
RCCD1-204ENST00000555737 LOC101927531A0A1B0GV80 90 aa10.61□□□□□ -0.71
RCCD1-204ENST00000555737 KRTAP13-1Q8IUC0 172 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms