RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 C1orf195Q5TG92 126 aa5.83□□□□□ -1.48
TDP1-212ENST00000555565 SMIM11BQ8TCY0 68 aa5.83□□□□□ -1.48
TDP1-212ENST00000555565 USH2AO75445 5202 aa5.82□□□□□ -1.48
TDP1-212ENST00000555565 TRAV13-2A0A0B4J235 113 aa5.82□□□□□ -1.48
TDP1-212ENST00000555565 SNRPEP62304 92 aaKnown RBP5.8□□□□□ -1.48
TDP1-212ENST00000555565 NHP2Q9NX24 153 aaKnown RBP5.8□□□□□ -1.48
TDP1-212ENST00000555565 LINC00575Q6W349 94 aa5.77□□□□□ -1.49
TDP1-212ENST00000555565 HIST3H2BBQ8N257 126 aa5.77□□□□□ -1.49
TDP1-212ENST00000555565 HIST1H2BLQ99880 126 aa5.77□□□□□ -1.49
TDP1-212ENST00000555565 M0R2T5 61 aa5.76□□□□□ -1.49
TDP1-212ENST00000555565 RPL37P61927 97 aaKnown RBP5.76□□□□□ -1.49
TDP1-212ENST00000555565 VAMP3Q15836 100 aa5.76□□□□□ -1.49
TDP1-212ENST00000555565 FCGBPQ9Y6R7 5405 aaPredicted RBP5.76□□□□□ -1.49
TDP1-212ENST00000555565 F8WEM9 126 aa5.75□□□□□ -1.49
TDP1-212ENST00000555565 TCL1BO95988 128 aa5.75□□□□□ -1.49
TDP1-212ENST00000555565 Q6ZQY7 126 aa5.75□□□□□ -1.49
TDP1-212ENST00000555565 hADV29S1A0JD25 119 aa5.74□□□□□ -1.49
TDP1-212ENST00000555565 HSBP1L1C9JCN9 74 aa5.73□□□□□ -1.49
TDP1-212ENST00000555565 S100A2P29034 98 aa5.73□□□□□ -1.49
TDP1-212ENST00000555565 Q6JHZ5 121 aa5.72□□□□□ -1.49
TDP1-212ENST00000555565 IGFL1Q6UW32 110 aa5.72□□□□□ -1.49
TDP1-212ENST00000555565 CLEC2BQ92478 149 aa5.72□□□□□ -1.49
TDP1-212ENST00000555565 SYNE2Q8WXH0 6885 aaKnown RBP5.71□□□□□ -1.5
TDP1-212ENST00000555565 OCIAD2Q56VL3 154 aa5.71□□□□□ -1.5
TDP1-212ENST00000555565 MACF1Q9UPN3 7388 aaKnown RBP5.71□□□□□ -1.5
TDP1-212ENST00000555565 TRBV7-7A0A0K0K1E9 115 aa5.7□□□□□ -1.5
TDP1-212ENST00000555565 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.7□□□□□ -1.5
TDP1-212ENST00000555565 C12orf57Q99622 126 aa5.7□□□□□ -1.5
TDP1-212ENST00000555565 BVES-AS1Q5T3Y7 98 aa5.68□□□□□ -1.5
TDP1-212ENST00000555565 HIST1H4GQ99525 98 aa5.68□□□□□ -1.5
TDP1-212ENST00000555565 S100A6P06703 90 aa5.67□□□□□ -1.5
TDP1-212ENST00000555565 COX8AP10176 69 aa5.67□□□□□ -1.5
TDP1-212ENST00000555565 PPDPFLQ8WWR9 84 aa5.67□□□□□ -1.5
TDP1-212ENST00000555565 SNHG12Q9BXW3 62 aa5.67□□□□□ -1.5
TDP1-212ENST00000555565 H3BUT2 72 aa5.66□□□□□ -1.5
TDP1-212ENST00000555565 SCGB1D1O95968 90 aa5.66□□□□□ -1.5
TDP1-212ENST00000555565 COX6B2Q6YFQ2 88 aa5.66□□□□□ -1.5
TDP1-212ENST00000555565 OBSCN-AS1Q96MR7 158 aa5.66□□□□□ -1.5
TDP1-212ENST00000555565 KRTAP9-8Q9BYQ0 159 aa5.66□□□□□ -1.5
TDP1-212ENST00000555565 DLEU1O43261 78 aa5.64□□□□□ -1.51
TDP1-212ENST00000555565 CFC1P0CG37 223 aa5.64□□□□□ -1.51
TDP1-212ENST00000555565 S100A1P23297 94 aa5.63□□□□□ -1.51
TDP1-212ENST00000555565 Q75L30 129 aa5.63□□□□□ -1.51
TDP1-212ENST00000555565 KRTAP19-1Q8IUB9 90 aa5.63□□□□□ -1.51
TDP1-212ENST00000555565 LST1O00453 97 aa5.62□□□□□ -1.51
TDP1-212ENST00000555565 ATP11AUNQ6ZP68 121 aa5.62□□□□□ -1.51
TDP1-212ENST00000555565 C14orf144Q96I85 54 aa5.62□□□□□ -1.51
TDP1-212ENST00000555565 Q6Q795 121 aa5.61□□□□□ -1.51
TDP1-212ENST00000555565 FAM218AQ96MZ4 157 aa5.61□□□□□ -1.51
TDP1-212ENST00000555565 A0A0B4J2C4 111 aa5.6□□□□□ -1.51
TDP1-212ENST00000555565 H0YGX0 51 aa5.6□□□□□ -1.51
TDP1-212ENST00000555565 NDUFV3P56181 108 aaKnown RBP5.6□□□□□ -1.51
TDP1-212ENST00000555565 RAB37Q96AX2 223 aa5.6□□□□□ -1.51
TDP1-212ENST00000555565 HIGD1BQ9P298 99 aa5.6□□□□□ -1.51
TDP1-212ENST00000555565 C2orf91Q6ZV80 131 aa5.59□□□□□ -1.51
TDP1-212ENST00000555565 TEN1Q86WV5 123 aa5.59□□□□□ -1.51
TDP1-212ENST00000555565 Q96NJ1 140 aa5.59□□□□□ -1.51
TDP1-212ENST00000555565 SS18L2Q9UHA2 77 aa5.59□□□□□ -1.51
TDP1-212ENST00000555565 PAM16Q9Y3D7 125 aa5.59□□□□□ -1.51
TDP1-212ENST00000555565 SNCGO76070 127 aa5.58□□□□□ -1.52
TDP1-212ENST00000555565 SPATA45Q537H7 98 aa5.58□□□□□ -1.52
TDP1-212ENST00000555565 A0A087WSZ3 146 aa5.57□□□□□ -1.52
TDP1-212ENST00000555565 C20orf166-AS1Q96NR2 134 aa5.57□□□□□ -1.52
TDP1-212ENST00000555565 A8MUU9 505 aa5.55□□□□□ -1.52
TDP1-212ENST00000555565 H3BMG7 143 aa5.55□□□□□ -1.52
TDP1-212ENST00000555565 PRO1854Q9UHT4 67 aa5.55□□□□□ -1.52
TDP1-212ENST00000555565 A0A1B0GX51 115 aa5.54□□□□□ -1.52
TDP1-212ENST00000555565 FABP2P12104 132 aa5.54□□□□□ -1.52
TDP1-212ENST00000555565 CEND1Q8N111 149 aa5.54□□□□□ -1.52
TDP1-212ENST00000555565 VAMP8Q9BV40 100 aa5.54□□□□□ -1.52
TDP1-212ENST00000555565 FXYD2P54710 66 aa5.53□□□□□ -1.52
TDP1-212ENST00000555565 A0A1W2PNM2 257 aa5.52□□□□□ -1.53
TDP1-212ENST00000555565 TRIAP1O43715 76 aa5.52□□□□□ -1.53
TDP1-212ENST00000555565 GHRHP01286 108 aa5.52□□□□□ -1.53
TDP1-212ENST00000555565 TMEM238LA0A1B0GVL6 79 aa5.51□□□□□ -1.53
TDP1-212ENST00000555565 DSCR10P59022 87 aa5.51□□□□□ -1.53
TDP1-212ENST00000555565 MT2AP02795 61 aa5.5□□□□□ -1.53
TDP1-212ENST00000555565 SIGMAR1Q99720 223 aa5.49□□□□□ -1.53
TDP1-212ENST00000555565 KRTAP9-3Q9BYQ3 159 aa5.49□□□□□ -1.53
TDP1-212ENST00000555565 KRTAP16-1A8MUX0 517 aa5.48□□□□□ -1.53
TDP1-212ENST00000555565 TRBV7-4A0A0J9YYF1 115 aa5.47□□□□□ -1.53
TDP1-212ENST00000555565 A0A1B0GV72 72 aa5.47□□□□□ -1.53
TDP1-212ENST00000555565 IGKV4-1P06312 121 aa5.47□□□□□ -1.53
TDP1-212ENST00000555565 LINC00313P59037 77 aa5.47□□□□□ -1.53
TDP1-212ENST00000555565 ANKRD29Q8N6D5 301 aa5.47□□□□□ -1.53
TDP1-212ENST00000555565 ORMDL1Q9P0S3 153 aa5.47□□□□□ -1.53
TDP1-212ENST00000555565 TRBV20-1A0A075B6N2 111 aa5.46□□□□□ -1.54
TDP1-212ENST00000555565 K7ERJ3 54 aa5.46□□□□□ -1.54
TDP1-212ENST00000555565 DNAL4O96015 105 aa5.46□□□□□ -1.54
TDP1-212ENST00000555565 MT1FP04733 61 aa5.46□□□□□ -1.54
TDP1-212ENST00000555565 PSMB2P49721 201 aa5.45□□□□□ -1.54
TDP1-212ENST00000555565 HSD52Q0P140 79 aa5.45□□□□□ -1.54
TDP1-212ENST00000555565 KRTAP6-3Q3LI67 103 aa5.45□□□□□ -1.54
TDP1-212ENST00000555565 NOTCH2NLQ7Z3S9 236 aa5.45□□□□□ -1.54
TDP1-212ENST00000555565 H3BQ85 93 aa5.44□□□□□ -1.54
TDP1-212ENST00000555565 TMEM256-PLSCR3K7ERE1 68 aa5.44□□□□□ -1.54
TDP1-212ENST00000555565 DEFB116Q30KQ4 102 aa5.44□□□□□ -1.54
TDP1-212ENST00000555565 PYY3Q5JQD4 70 aa5.44□□□□□ -1.54
TDP1-212ENST00000555565 LINC00472Q9H8W2 130 aa5.44□□□□□ -1.54
TDP1-212ENST00000555565 CCKP06307 115 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms