RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 hADV29S1A0JD25 119 aa7.7□□□□□ -1.18
SHMT2-219ENST00000555563 KRTAP13-3Q3SY46 172 aa7.7□□□□□ -1.18
SHMT2-219ENST00000555563 Q6ZQY7 126 aa7.7□□□□□ -1.18
SHMT2-219ENST00000555563 RAB37Q96AX2 223 aa7.7□□□□□ -1.18
SHMT2-219ENST00000555563 PRO1933Q9H354 126 aa7.7□□□□□ -1.18
SHMT2-219ENST00000555563 BVES-AS1Q5T3Y7 98 aa7.69□□□□□ -1.18
SHMT2-219ENST00000555563 CEND1Q8N111 149 aa7.69□□□□□ -1.18
SHMT2-219ENST00000555563 LIMD2Q9BT23 127 aa7.68□□□□□ -1.18
SHMT2-219ENST00000555563 A0A0G2JQZ4 141 aa7.67□□□□□ -1.18
SHMT2-219ENST00000555563 A0A0U1RQV1 116 aa7.67□□□□□ -1.18
SHMT2-219ENST00000555563 CD164Q04900 197 aa7.67□□□□□ -1.18
SHMT2-219ENST00000555563 KRTAP9-2Q9BYQ4 174 aa7.67□□□□□ -1.18
SHMT2-219ENST00000555563 FXYD2P54710 66 aa7.66□□□□□ -1.18
SHMT2-219ENST00000555563 F8WEM9 126 aa7.65□□□□□ -1.18
SHMT2-219ENST00000555563 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.65□□□□□ -1.18
SHMT2-219ENST00000555563 HSD52Q0P140 79 aa7.63□□□□□ -1.19
SHMT2-219ENST00000555563 PRO1854Q9UHT4 67 aa7.63□□□□□ -1.19
SHMT2-219ENST00000555563 FAM218AQ96MZ4 157 aa7.62□□□□□ -1.19
SHMT2-219ENST00000555563 UQCR10Q9UDW1 63 aa7.61□□□□□ -1.19
SHMT2-219ENST00000555563 IGLV8-61A0A075B6I0 122 aa7.6□□□□□ -1.19
SHMT2-219ENST00000555563 H0YGX0 51 aa7.6□□□□□ -1.19
SHMT2-219ENST00000555563 Q5XG85 94 aa7.6□□□□□ -1.19
SHMT2-219ENST00000555563 PPDPFLQ8WWR9 84 aa7.6□□□□□ -1.19
SHMT2-219ENST00000555563 K7ERJ3 54 aa7.59□□□□□ -1.19
SHMT2-219ENST00000555563 TRIAP1O43715 76 aa7.58□□□□□ -1.2
SHMT2-219ENST00000555563 Q6JHZ5 121 aa7.58□□□□□ -1.2
SHMT2-219ENST00000555563 IGFL1Q6UW32 110 aa7.58□□□□□ -1.2
SHMT2-219ENST00000555563 CLEC2BQ92478 149 aa7.58□□□□□ -1.2
SHMT2-219ENST00000555563 OCIAD2Q56VL3 154 aa7.57□□□□□ -1.2
SHMT2-219ENST00000555563 SNHG12Q9BXW3 62 aa7.57□□□□□ -1.2
SHMT2-219ENST00000555563 H3BUT2 72 aa7.56□□□□□ -1.2
SHMT2-219ENST00000555563 SNCGO76070 127 aa7.56□□□□□ -1.2
SHMT2-219ENST00000555563 XP32Q5T750 250 aa7.56□□□□□ -1.2
SHMT2-219ENST00000555563 C1orf195Q5TG92 126 aa7.56□□□□□ -1.2
SHMT2-219ENST00000555563 ASB16-AS1Q495Z4 193 aa7.55□□□□□ -1.2
SHMT2-219ENST00000555563 TRBV7-7A0A0K0K1E9 115 aa7.54□□□□□ -1.2
SHMT2-219ENST00000555563 A0A1B0GX51 115 aa7.54□□□□□ -1.2
SHMT2-219ENST00000555563 LCE2AQ5TA79 106 aaPredicted RBP7.54□□□□□ -1.2
SHMT2-219ENST00000555563 FAT4Q6V0I7 4981 aa7.53□□□□□ -1.2
SHMT2-219ENST00000555563 KRTAP9-6A0A140TA67 174 aa7.53□□□□□ -1.2
SHMT2-219ENST00000555563 TCL1BO95988 128 aa7.53□□□□□ -1.2
SHMT2-219ENST00000555563 C9orf92A6NGG3 77 aa7.52□□□□□ -1.21
SHMT2-219ENST00000555563 PSMB2P49721 201 aa7.52□□□□□ -1.21
SHMT2-219ENST00000555563 SEC61BP60468 96 aaKnown RBP7.52□□□□□ -1.21
SHMT2-219ENST00000555563 NDUFV3P56181 108 aaKnown RBP7.51□□□□□ -1.21
SHMT2-219ENST00000555563 MUC17Q685J3 4493 aa7.5□□□□□ -1.21
SHMT2-219ENST00000555563 FABP2P12104 132 aa7.49□□□□□ -1.21
SHMT2-219ENST00000555563 SMIM6P0DI80 62 aa7.48□□□□□ -1.21
SHMT2-219ENST00000555563 DNAL4O96015 105 aa7.47□□□□□ -1.21
SHMT2-219ENST00000555563 COX6CP09669 75 aa7.47□□□□□ -1.21
SHMT2-219ENST00000555563 KRTAP4-1Q9BYQ7 146 aa7.47□□□□□ -1.21
SHMT2-219ENST00000555563 H3BMG7 143 aa7.46□□□□□ -1.22
SHMT2-219ENST00000555563 Q6Q795 121 aa7.45□□□□□ -1.22
SHMT2-219ENST00000555563 ORMDL1Q9P0S3 153 aa7.45□□□□□ -1.22
SHMT2-219ENST00000555563 TEN1Q86WV5 123 aa7.43□□□□□ -1.22
SHMT2-219ENST00000555563 A0A1B0GV72 72 aa7.42□□□□□ -1.22
SHMT2-219ENST00000555563 H3BQ85 93 aa7.41□□□□□ -1.22
SHMT2-219ENST00000555563 M0R143 59 aa7.41□□□□□ -1.22
SHMT2-219ENST00000555563 LST1O00453 97 aa7.41□□□□□ -1.22
SHMT2-219ENST00000555563 PCOTHQ58A44 107 aa7.41□□□□□ -1.22
SHMT2-219ENST00000555563 SS18L2Q9UHA2 77 aa7.41□□□□□ -1.22
SHMT2-219ENST00000555563 A0A087WSZ3 146 aa7.4□□□□□ -1.22
SHMT2-219ENST00000555563 TRACP01848 142 aa7.4□□□□□ -1.22
SHMT2-219ENST00000555563 SCGB1C2P0DMR2 95 aa7.4□□□□□ -1.22
SHMT2-219ENST00000555563 A0A1W2PNM2 257 aa7.39□□□□□ -1.23
SHMT2-219ENST00000555563 TMEM256-PLSCR3K7ERE1 68 aa7.39□□□□□ -1.23
SHMT2-219ENST00000555563 RPL37P61927 97 aaKnown RBP7.38□□□□□ -1.23
SHMT2-219ENST00000555563 ANKRD29Q8N6D5 301 aa7.37□□□□□ -1.23
SHMT2-219ENST00000555563 LOC105371267A0A1B0GV96 52 aa7.36□□□□□ -1.23
SHMT2-219ENST00000555563 UBE2V1Q13404 147 aa7.36□□□□□ -1.23
SHMT2-219ENST00000555563 NAA38Q9BRA0 125 aaKnown RBP7.36□□□□□ -1.23
SHMT2-219ENST00000555563 TSTD3H0UI37 97 aa7.35□□□□□ -1.23
SHMT2-219ENST00000555563 Q96NJ1 140 aa7.35□□□□□ -1.23
SHMT2-219ENST00000555563 OBSCN-AS1Q96MR7 158 aa7.34□□□□□ -1.23
SHMT2-219ENST00000555563 TRBV7-4A0A0J9YYF1 115 aa7.33□□□□□ -1.24
SHMT2-219ENST00000555563 CCKP06307 115 aa7.32□□□□□ -1.24
SHMT2-219ENST00000555563 ATXN8Q156A1 80 aa7.3□□□□□ -1.24
SHMT2-219ENST00000555563 BATFQ16520 125 aa7.3□□□□□ -1.24
SHMT2-219ENST00000555563 BAALC-AS2P0C853 105 aa7.29□□□□□ -1.24
SHMT2-219ENST00000555563 SIGMAR1Q99720 223 aa7.29□□□□□ -1.24
SHMT2-219ENST00000555563 RBM3P98179 157 aaKnown RBP7.28□□□□□ -1.24
SHMT2-219ENST00000555563 Q75L30 129 aa7.28□□□□□ -1.24
SHMT2-219ENST00000555563 KRTAP19-2Q3LHN2 52 aa7.27□□□□□ -1.25
SHMT2-219ENST00000555563 VPS25Q9BRG1 176 aa7.27□□□□□ -1.25
SHMT2-219ENST00000555563 DSCR8Q96T75 97 aa7.26□□□□□ -1.25
SHMT2-219ENST00000555563 IGKV4-1P06312 121 aa7.25□□□□□ -1.25
SHMT2-219ENST00000555563 LCE2CQ5TA81 110 aa7.25□□□□□ -1.25
SHMT2-219ENST00000555563 LYRM7Q5U5X0 104 aa7.25□□□□□ -1.25
SHMT2-219ENST00000555563 H3BS24 57 aa7.24□□□□□ -1.25
SHMT2-219ENST00000555563 DSCR10P59022 87 aa7.24□□□□□ -1.25
SHMT2-219ENST00000555563 LINC00472Q9H8W2 130 aa7.24□□□□□ -1.25
SHMT2-219ENST00000555563 DEFB116Q30KQ4 102 aa7.23□□□□□ -1.25
SHMT2-219ENST00000555563 C20orf166-AS1Q96NR2 134 aa7.23□□□□□ -1.25
SHMT2-219ENST00000555563 FSIP2Q5CZC0 6907 aa7.22□□□□□ -1.25
SHMT2-219ENST00000555563 C9JAW5 83 aa7.22□□□□□ -1.25
SHMT2-219ENST00000555563 ATP11AUNQ6ZP68 121 aa7.22□□□□□ -1.25
SHMT2-219ENST00000555563 TRBV20-1A0A075B6N2 111 aa7.21□□□□□ -1.26
SHMT2-219ENST00000555563 A8MUU9 505 aa7.21□□□□□ -1.26
SHMT2-219ENST00000555563 CRCT1Q9UGL9 99 aa7.21□□□□□ -1.26
SHMT2-219ENST00000555563 JMJD7-PLA2G4BH0Y9G9 81 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms