RNA–Protein interactions for RNA: ENST00000555241.5

SYNE2-218, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-218ENST00000555241 HIGD1BQ9P298 99 aa11.82□□□□□ -0.52
SYNE2-218ENST00000555241 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.79□□□□□ -0.52
SYNE2-218ENST00000555241 VAMP8Q9BV40 100 aa11.79□□□□□ -0.52
SYNE2-218ENST00000555241 KRTAP4-1Q9BYQ7 146 aa11.79□□□□□ -0.52
SYNE2-218ENST00000555241 C1orf195Q5TG92 126 aa11.78□□□□□ -0.52
SYNE2-218ENST00000555241 C9orf92A6NGG3 77 aa11.77□□□□□ -0.53
SYNE2-218ENST00000555241 CFC1BP0CG36 223 aa11.77□□□□□ -0.53
SYNE2-218ENST00000555241 CFC1P0CG37 223 aa11.77□□□□□ -0.53
SYNE2-218ENST00000555241 IGLV8-61A0A075B6I0 122 aa11.76□□□□□ -0.53
SYNE2-218ENST00000555241 Q6JHZ5 121 aa11.76□□□□□ -0.53
SYNE2-218ENST00000555241 PPDPFLQ8WWR9 84 aa11.76□□□□□ -0.53
SYNE2-218ENST00000555241 RAB37Q96AX2 223 aa11.76□□□□□ -0.53
SYNE2-218ENST00000555241 TCL1BO95988 128 aa11.75□□□□□ -0.53
SYNE2-218ENST00000555241 C2orf91Q6ZV80 131 aa11.75□□□□□ -0.53
SYNE2-218ENST00000555241 A0A0B4J2C4 111 aa11.74□□□□□ -0.53
SYNE2-218ENST00000555241 CLEC2BQ92478 149 aa11.73□□□□□ -0.53
SYNE2-218ENST00000555241 OCIAD2Q56VL3 154 aa11.72□□□□□ -0.53
SYNE2-218ENST00000555241 IGFL1Q6UW32 110 aa11.71□□□□□ -0.53
SYNE2-218ENST00000555241 H0YGX0 51 aa11.69□□□□□ -0.54
SYNE2-218ENST00000555241 CEND1Q8N111 149 aa11.69□□□□□ -0.54
SYNE2-218ENST00000555241 SNHG12Q9BXW3 62 aa11.69□□□□□ -0.54
SYNE2-218ENST00000555241 SNCGO76070 127 aa11.68□□□□□ -0.54
SYNE2-218ENST00000555241 TRBV7-7A0A0K0K1E9 115 aa11.67□□□□□ -0.54
SYNE2-218ENST00000555241 TMEM238LA0A1B0GVL6 79 aa11.66□□□□□ -0.54
SYNE2-218ENST00000555241 A6NJY4 79 aa11.66□□□□□ -0.54
SYNE2-218ENST00000555241 PCOTHQ58A44 107 aa11.66□□□□□ -0.54
SYNE2-218ENST00000555241 FAM218AQ96MZ4 157 aa11.63□□□□□ -0.55
SYNE2-218ENST00000555241 PRO1854Q9UHT4 67 aa11.63□□□□□ -0.55
SYNE2-218ENST00000555241 H3BUT2 72 aa11.61□□□□□ -0.55
SYNE2-218ENST00000555241 FXYD2P54710 66 aa11.61□□□□□ -0.55
SYNE2-218ENST00000555241 PYY3Q5JQD4 70 aa11.61□□□□□ -0.55
SYNE2-218ENST00000555241 A0A1B0GX51 115 aa11.59□□□□□ -0.55
SYNE2-218ENST00000555241 GHRHP01286 108 aa11.57□□□□□ -0.56
SYNE2-218ENST00000555241 RPL37P61927 97 aaKnown RBP11.57□□□□□ -0.56
SYNE2-218ENST00000555241 NDUFV3P56181 108 aaKnown RBP11.56□□□□□ -0.56
SYNE2-218ENST00000555241 HSD52Q0P140 79 aa11.55□□□□□ -0.56
SYNE2-218ENST00000555241 Q6Q795 121 aa11.55□□□□□ -0.56
SYNE2-218ENST00000555241 KRTAP9-2Q9BYQ4 174 aa11.54□□□□□ -0.56
SYNE2-218ENST00000555241 TRIAP1O43715 76 aa11.53□□□□□ -0.56
SYNE2-218ENST00000555241 LST1O00453 97 aa11.52□□□□□ -0.57
SYNE2-218ENST00000555241 SS18L2Q9UHA2 77 aa11.52□□□□□ -0.57
SYNE2-218ENST00000555241 TEN1Q86WV5 123 aa11.51□□□□□ -0.57
SYNE2-218ENST00000555241 KRTAP19-2Q3LHN2 52 aa11.49□□□□□ -0.57
SYNE2-218ENST00000555241 LCE2CQ5TA81 110 aa11.49□□□□□ -0.57
SYNE2-218ENST00000555241 H3BMG7 143 aa11.48□□□□□ -0.57
SYNE2-218ENST00000555241 FABP2P12104 132 aa11.48□□□□□ -0.57
SYNE2-218ENST00000555241 TMA7Q9Y2S6 64 aaKnown RBP11.48□□□□□ -0.57
SYNE2-218ENST00000555241 UQCR10Q9UDW1 63 aa11.46□□□□□ -0.57
SYNE2-218ENST00000555241 K7ERJ3 54 aa11.45□□□□□ -0.58
SYNE2-218ENST00000555241 DNAL4O96015 105 aa11.45□□□□□ -0.58
SYNE2-218ENST00000555241 PSMB2P49721 201 aa11.44□□□□□ -0.58
SYNE2-218ENST00000555241 COX6CP09669 75 aa11.43□□□□□ -0.58
SYNE2-218ENST00000555241 OBSCN-AS1Q96MR7 158 aa11.43□□□□□ -0.58
SYNE2-218ENST00000555241 A0A087WSZ3 146 aa11.42□□□□□ -0.58
SYNE2-218ENST00000555241 H3BQ85 93 aa11.42□□□□□ -0.58
SYNE2-218ENST00000555241 ORMDL1Q9P0S3 153 aa11.42□□□□□ -0.58
SYNE2-218ENST00000555241 Q75L30 129 aa11.4□□□□□ -0.58
SYNE2-218ENST00000555241 A0A1W2PNM2 257 aa11.37□□□□□ -0.59
SYNE2-218ENST00000555241 TMEM256-PLSCR3K7ERE1 68 aa11.36□□□□□ -0.59
SYNE2-218ENST00000555241 MT1HP80294 61 aa11.36□□□□□ -0.59
SYNE2-218ENST00000555241 ATP11AUNQ6ZP68 121 aa11.35□□□□□ -0.59
SYNE2-218ENST00000555241 ANKRD29Q8N6D5 301 aa11.35□□□□□ -0.59
SYNE2-218ENST00000555241 Q96NJ1 140 aa11.35□□□□□ -0.59
SYNE2-218ENST00000555241 TRBV7-4A0A0J9YYF1 115 aa11.32□□□□□ -0.6
SYNE2-218ENST00000555241 A0A1B0GV72 72 aa11.3□□□□□ -0.6
SYNE2-218ENST00000555241 TRACP01848 142 aa11.3□□□□□ -0.6
SYNE2-218ENST00000555241 UBE2V1Q13404 147 aa11.29□□□□□ -0.6
SYNE2-218ENST00000555241 C20orf166-AS1Q96NR2 134 aa11.28□□□□□ -0.6
SYNE2-218ENST00000555241 SCGB1C2P0DMR2 95 aa11.27□□□□□ -0.61
SYNE2-218ENST00000555241 COX6B2Q6YFQ2 88 aa11.27□□□□□ -0.61
SYNE2-218ENST00000555241 SIGMAR1Q99720 223 aa11.26□□□□□ -0.61
SYNE2-218ENST00000555241 A8MUU9 505 aa11.25□□□□□ -0.61
SYNE2-218ENST00000555241 CCKP06307 115 aa11.24□□□□□ -0.61
SYNE2-218ENST00000555241 LCE2DQ5TA82 110 aaPredicted RBP11.22□□□□□ -0.61
SYNE2-218ENST00000555241 FLGP20930 4061 aaPredicted RBP11.21□□□□□ -0.61
SYNE2-218ENST00000555241 IGKV4-1P06312 121 aa11.21□□□□□ -0.61
SYNE2-218ENST00000555241 DSCR10P59022 87 aa11.21□□□□□ -0.61
SYNE2-218ENST00000555241 RBM3P98179 157 aaKnown RBP11.18□□□□□ -0.62
SYNE2-218ENST00000555241 LINC00472Q9H8W2 130 aa11.18□□□□□ -0.62
SYNE2-218ENST00000555241 M0R143 59 aa11.17□□□□□ -0.62
SYNE2-218ENST00000555241 LINC00313P59037 77 aa11.17□□□□□ -0.62
SYNE2-218ENST00000555241 DSCR8Q96T75 97 aa11.16□□□□□ -0.62
SYNE2-218ENST00000555241 M0R2T5 61 aa11.15□□□□□ -0.62
SYNE2-218ENST00000555241 KRTAP9-6A0A140TA67 174 aa11.14□□□□□ -0.63
SYNE2-218ENST00000555241 BAALC-AS2P0C853 105 aa11.14□□□□□ -0.63
SYNE2-218ENST00000555241 LORP23490 312 aaPredicted RBP11.14□□□□□ -0.63
SYNE2-218ENST00000555241 KRTAP10-6P60371 365 aaPredicted RBP11.14□□□□□ -0.63
SYNE2-218ENST00000555241 VPS25Q9BRG1 176 aa11.14□□□□□ -0.63
SYNE2-218ENST00000555241 DEFB116Q30KQ4 102 aa11.13□□□□□ -0.63
SYNE2-218ENST00000555241 KRTAP16-1A8MUX0 517 aa11.12□□□□□ -0.63
SYNE2-218ENST00000555241 SMIM6P0DI80 62 aa11.12□□□□□ -0.63
SYNE2-218ENST00000555241 ATXN8Q156A1 80 aa11.09□□□□□ -0.63
SYNE2-218ENST00000555241 C9JAW5 83 aa11.08□□□□□ -0.64
SYNE2-218ENST00000555241 C21orf62-AS1Q17RA5 79 aa11.08□□□□□ -0.64
SYNE2-218ENST00000555241 NOTCH2NLQ7Z3S9 236 aa11.07□□□□□ -0.64
SYNE2-218ENST00000555241 IGHV6-1A0A0B4J1U7 121 aa11.06□□□□□ -0.64
SYNE2-218ENST00000555241 NAA38Q9BRA0 125 aaKnown RBP11.06□□□□□ -0.64
SYNE2-218ENST00000555241 TRBV20-1A0A075B6N2 111 aa11.04□□□□□ -0.64
SYNE2-218ENST00000555241 A0A1B0GVX0 72 aa11.02□□□□□ -0.65
SYNE2-218ENST00000555241 C8orf87E5RJ46 101 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms