RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 A0A087X002 238 aa6.04□□□□□ -1.44
SYNE2-215ENST00000554997 A0A1W2PPM0 123 aa6.04□□□□□ -1.44
SYNE2-215ENST00000554997 LST1O00453 97 aa6.04□□□□□ -1.44
SYNE2-215ENST00000554997 GHRHP01286 108 aa6.04□□□□□ -1.44
SYNE2-215ENST00000554997 TRACP01848 142 aa6.04□□□□□ -1.44
SYNE2-215ENST00000554997 LYRM7Q5U5X0 104 aa6.04□□□□□ -1.44
SYNE2-215ENST00000554997 Q8N377 158 aa6.04□□□□□ -1.44
SYNE2-215ENST00000554997 PRR26Q8N8Z3 221 aa6.04□□□□□ -1.44
SYNE2-215ENST00000554997 PPDPFLQ8WWR9 84 aa6.04□□□□□ -1.44
SYNE2-215ENST00000554997 FAT3Q8TDW7 4589 aa6.04□□□□□ -1.44
SYNE2-215ENST00000554997 HERC1Q15751 4861 aa6.04□□□□□ -1.44
SYNE2-215ENST00000554997 LRP1Q07954 4544 aaKnown RBP6.03□□□□□ -1.44
SYNE2-215ENST00000554997 DMBT1Q9UGM3 2413 aaPredicted RBP6.03□□□□□ -1.44
SYNE2-215ENST00000554997 ATXN8Q156A1 80 aa6.03□□□□□ -1.44
SYNE2-215ENST00000554997 SMIM29Q86T20 159 aa6.03□□□□□ -1.44
SYNE2-215ENST00000554997 H3BQ85 93 aa6.02□□□□□ -1.45
SYNE2-215ENST00000554997 TCL1BO95988 128 aa6.02□□□□□ -1.45
SYNE2-215ENST00000554997 DNAL4O96015 105 aa6.02□□□□□ -1.45
SYNE2-215ENST00000554997 FABP2P12104 132 aa6.02□□□□□ -1.45
SYNE2-215ENST00000554997 KRTAP13-2Q52LG2 175 aa6.02□□□□□ -1.45
SYNE2-215ENST00000554997 LAMTOR3Q9UHA4 124 aa6.02□□□□□ -1.45
SYNE2-215ENST00000554997 SSBP3-AS1Q7Z2R9 100 aa6.01□□□□□ -1.45
SYNE2-215ENST00000554997 TMEM256-PLSCR3K7ERE1 68 aa6□□□□□ -1.45
SYNE2-215ENST00000554997 MT1HL1P0DM35 61 aa6□□□□□ -1.45
SYNE2-215ENST00000554997 C3orf22Q8N5N4 141 aa6□□□□□ -1.45
SYNE2-215ENST00000554997 TYMSOSQ8TAI1 123 aa6□□□□□ -1.45
SYNE2-215ENST00000554997 ORMDL1Q9P0S3 153 aa6□□□□□ -1.45
SYNE2-215ENST00000554997 IGLV9-49A0A0B4J1Y8 123 aa5.99□□□□□ -1.45
SYNE2-215ENST00000554997 BAALC-AS2P0C853 105 aa5.98□□□□□ -1.45
SYNE2-215ENST00000554997 NDUFV3P56181 108 aaKnown RBP5.97□□□□□ -1.45
SYNE2-215ENST00000554997 SPCS1Q9Y6A9 102 aa5.97□□□□□ -1.45
SYNE2-215ENST00000554997 UBE2V1Q13404 147 aa5.96□□□□□ -1.46
SYNE2-215ENST00000554997 MOBPQ13875 183 aa5.96□□□□□ -1.46
SYNE2-215ENST00000554997 C9orf153Q5TBE3 101 aa5.96□□□□□ -1.46
SYNE2-215ENST00000554997 IGLV8-61A0A075B6I0 122 aa5.95□□□□□ -1.46
SYNE2-215ENST00000554997 F8WEM9 126 aa5.95□□□□□ -1.46
SYNE2-215ENST00000554997 H3BMG7 143 aa5.95□□□□□ -1.46
SYNE2-215ENST00000554997 Q8NBF4 154 aa5.95□□□□□ -1.46
SYNE2-215ENST00000554997 C9JAW5 83 aa5.94□□□□□ -1.46
SYNE2-215ENST00000554997 SPAG11AQ6PDA7 123 aa5.94□□□□□ -1.46
SYNE2-215ENST00000554997 K7EP34 96 aa5.93□□□□□ -1.46
SYNE2-215ENST00000554997 Q6JHZ5 121 aa5.93□□□□□ -1.46
SYNE2-215ENST00000554997 LOC100996750A0A140TA64 210 aa5.92□□□□□ -1.46
SYNE2-215ENST00000554997 GTF2H5Q6ZYL4 71 aa5.92□□□□□ -1.46
SYNE2-215ENST00000554997 ANKRD29Q8N6D5 301 aa5.92□□□□□ -1.46
SYNE2-215ENST00000554997 LINC00304Q8N9R0 145 aa5.92□□□□□ -1.46
SYNE2-215ENST00000554997 KRTAP4-6Q9BYQ5 205 aa5.92□□□□□ -1.46
SYNE2-215ENST00000554997 H3BT86 120 aa5.9□□□□□ -1.46
SYNE2-215ENST00000554997 SPINK1P00995 79 aa5.9□□□□□ -1.46
SYNE2-215ENST00000554997 CD164Q04900 197 aa5.9□□□□□ -1.46
SYNE2-215ENST00000554997 A0A0G2JQZ4 141 aa5.89□□□□□ -1.47
SYNE2-215ENST00000554997 JMJD7-PLA2G4BH0Y9G9 81 aa5.89□□□□□ -1.47
SYNE2-215ENST00000554997 RBM3P98179 157 aaKnown RBP5.89□□□□□ -1.47
SYNE2-215ENST00000554997 IGFL1Q6UW32 110 aa5.89□□□□□ -1.47
SYNE2-215ENST00000554997 PRO0461Q9UI25 63 aa5.88□□□□□ -1.47
SYNE2-215ENST00000554997 F8W1H4 67 aa5.87□□□□□ -1.47
SYNE2-215ENST00000554997 RPS29P62273 56 aaKnown RBP5.87□□□□□ -1.47
SYNE2-215ENST00000554997 OBSCN-AS1Q96MR7 158 aa5.87□□□□□ -1.47
SYNE2-215ENST00000554997 Q6Q795 121 aa5.86□□□□□ -1.47
SYNE2-215ENST00000554997 HRCT1Q6UXD1 115 aa5.86□□□□□ -1.47
SYNE2-215ENST00000554997 MTURNQ8N3F0 131 aa5.86□□□□□ -1.47
SYNE2-215ENST00000554997 DSCR8Q96T75 97 aa5.86□□□□□ -1.47
SYNE2-215ENST00000554997 TNXBP22105 4242 aa5.85□□□□□ -1.47
SYNE2-215ENST00000554997 TRBV7-4A0A0J9YYF1 115 aa5.85□□□□□ -1.47
SYNE2-215ENST00000554997 TEN1Q86WV5 123 aa5.85□□□□□ -1.47
SYNE2-215ENST00000554997 A0A1B0GV72 72 aa5.84□□□□□ -1.47
SYNE2-215ENST00000554997 A0A1B0GV90 55 aa5.84□□□□□ -1.47
SYNE2-215ENST00000554997 PDE6GP18545 87 aa5.84□□□□□ -1.47
SYNE2-215ENST00000554997 Q5XG85 94 aa5.84□□□□□ -1.47
SYNE2-215ENST00000554997 HMCN2Q8NDA2 5059 aa5.84□□□□□ -1.47
SYNE2-215ENST00000554997 LOC110117498A0A087WWA1 95 aa5.83□□□□□ -1.48
SYNE2-215ENST00000554997 TRBV7-7A0A0K0K1E9 115 aa5.83□□□□□ -1.48
SYNE2-215ENST00000554997 A0A1W2PNM2 257 aa5.83□□□□□ -1.48
SYNE2-215ENST00000554997 CCKP06307 115 aa5.81□□□□□ -1.48
SYNE2-215ENST00000554997 Q6ZQT0 140 aa5.81□□□□□ -1.48
SYNE2-215ENST00000554997 LIMD2Q9BT23 127 aa5.81□□□□□ -1.48
SYNE2-215ENST00000554997 C21orf62-AS1Q17RA5 79 aa5.8□□□□□ -1.48
SYNE2-215ENST00000554997 XP32Q5T750 250 aa5.8□□□□□ -1.48
SYNE2-215ENST00000554997 C14orf132Q9NPU4 83 aa5.8□□□□□ -1.48
SYNE2-215ENST00000554997 A0A1B0GW54 56 aa5.79□□□□□ -1.48
SYNE2-215ENST00000554997 ASB16-AS1Q495Z4 193 aa5.79□□□□□ -1.48
SYNE2-215ENST00000554997 A0A087WSZ3 146 aa5.77□□□□□ -1.49
SYNE2-215ENST00000554997 ETDBQ3ZM63 59 aa5.77□□□□□ -1.49
SYNE2-215ENST00000554997 VPS25Q9BRG1 176 aa5.77□□□□□ -1.49
SYNE2-215ENST00000554997 SS18L2Q9UHA2 77 aa5.77□□□□□ -1.49
SYNE2-215ENST00000554997 C1orf195Q5TG92 126 aa5.76□□□□□ -1.49
SYNE2-215ENST00000554997 RETNLBQ9BQ08 111 aa5.76□□□□□ -1.49
SYNE2-215ENST00000554997 FP248Q71RG6 208 aaPredicted RBP5.75□□□□□ -1.49
SYNE2-215ENST00000554997 PRR4Q16378 134 aa5.74□□□□□ -1.49
SYNE2-215ENST00000554997 IGLV7-46A0A075B6I9 117 aa5.72□□□□□ -1.49
SYNE2-215ENST00000554997 LINC00472Q9H8W2 130 aa5.71□□□□□ -1.5
SYNE2-215ENST00000554997 Q96NJ1 140 aa5.7□□□□□ -1.5
SYNE2-215ENST00000554997 NREPQ16612 68 aa5.69□□□□□ -1.5
SYNE2-215ENST00000554997 LRP2P98164 4655 aa5.69□□□□□ -1.5
SYNE2-215ENST00000554997 UBR4Q5T4S7 5183 aa5.67□□□□□ -1.5
SYNE2-215ENST00000554997 J3KT08 172 aa5.66□□□□□ -1.5
SYNE2-215ENST00000554997 TPRXLQ17RH7 258 aa5.66□□□□□ -1.5
SYNE2-215ENST00000554997 DEFB116Q30KQ4 102 aa5.66□□□□□ -1.5
SYNE2-215ENST00000554997 IGKV4-1P06312 121 aa5.65□□□□□ -1.5
SYNE2-215ENST00000554997 ACYP1P07311 99 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms