RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 RPL28P46779 137 aaKnown RBP3.82□□□□□ -1.8
SCFD1-212ENST00000554486 RPL37AP61513 92 aaKnown RBP3.82□□□□□ -1.8
SCFD1-212ENST00000554486 C6orf99Q4VX62 202 aa3.82□□□□□ -1.8
SCFD1-212ENST00000554486 C1orf137Q5JT78 98 aa3.82□□□□□ -1.8
SCFD1-212ENST00000554486 KRTAP13-1Q8IUC0 172 aa3.82□□□□□ -1.8
SCFD1-212ENST00000554486 DIRC1Q969H9 104 aa3.82□□□□□ -1.8
SCFD1-212ENST00000554486 CBY1Q9Y3M2 126 aa3.82□□□□□ -1.8
SCFD1-212ENST00000554486 ETDCA0A1B0GVM5 59 aa3.81□□□□□ -1.8
SCFD1-212ENST00000554486 IGLV7-43P04211 117 aa3.81□□□□□ -1.8
SCFD1-212ENST00000554486 TRBV7-6A0A0J9YX20 115 aa3.8□□□□□ -1.8
SCFD1-212ENST00000554486 TAX1BP3O14907 124 aa3.8□□□□□ -1.8
SCFD1-212ENST00000554486 COX7BP24311 80 aa3.8□□□□□ -1.8
SCFD1-212ENST00000554486 UBE2AP49459 152 aa3.8□□□□□ -1.8
SCFD1-212ENST00000554486 ELOF1P60002 83 aaKnown RBP3.8□□□□□ -1.8
SCFD1-212ENST00000554486 PRLHP81277 87 aa3.8□□□□□ -1.8
SCFD1-212ENST00000554486 Q1RN00 199 aa3.8□□□□□ -1.8
SCFD1-212ENST00000554486 Q5VSD8 79 aa3.8□□□□□ -1.8
SCFD1-212ENST00000554486 FAM19A1Q7Z5A9 133 aa3.8□□□□□ -1.8
SCFD1-212ENST00000554486 NAA38Q9BRA0 125 aaKnown RBP3.8□□□□□ -1.8
SCFD1-212ENST00000554486 Q9BRP9 147 aa3.8□□□□□ -1.8
SCFD1-212ENST00000554486 H0Y9J4 135 aa3.79□□□□□ -1.8
SCFD1-212ENST00000554486 ZNF861PO60384 105 aa3.79□□□□□ -1.8
SCFD1-212ENST00000554486 NDUFV3P56181 108 aaKnown RBP3.79□□□□□ -1.8
SCFD1-212ENST00000554486 COL5A1-AS1Q5SY13 56 aa3.79□□□□□ -1.8
SCFD1-212ENST00000554486 Q6ZRX8 168 aa3.79□□□□□ -1.8
SCFD1-212ENST00000554486 SMCR5Q8TEV8 140 aa3.79□□□□□ -1.8
SCFD1-212ENST00000554486 ERC2-IT1O76042 136 aa3.78□□□□□ -1.8
SCFD1-212ENST00000554486 PSMB2P49721 201 aa3.78□□□□□ -1.8
SCFD1-212ENST00000554486 LINC00575Q6W349 94 aa3.78□□□□□ -1.8
SCFD1-212ENST00000554486 H3BUT2 72 aa3.77□□□□□ -1.81
SCFD1-212ENST00000554486 VAMP3Q15836 100 aa3.77□□□□□ -1.81
SCFD1-212ENST00000554486 CLEC2BQ92478 149 aa3.77□□□□□ -1.81
SCFD1-212ENST00000554486 HIGD2AQ9BW72 106 aa3.77□□□□□ -1.81
SCFD1-212ENST00000554486 FLG2Q5D862 2391 aaPredicted RBP3.77□□□□□ -1.81
SCFD1-212ENST00000554486 H0YGX0 51 aa3.76□□□□□ -1.81
SCFD1-212ENST00000554486 INAFM2P0DMQ5 153 aa3.76□□□□□ -1.81
SCFD1-212ENST00000554486 KRTAP5-9P26371 169 aa3.76□□□□□ -1.81
SCFD1-212ENST00000554486 SPINK6Q6UWN8 80 aa3.76□□□□□ -1.81
SCFD1-212ENST00000554486 DHRS4-AS1Q9P1J3 65 aa3.76□□□□□ -1.81
SCFD1-212ENST00000554486 A0A1W2PPM0 123 aa3.75□□□□□ -1.81
SCFD1-212ENST00000554486 hADV29S1A0JD25 119 aa3.75□□□□□ -1.81
SCFD1-212ENST00000554486 COX6CP09669 75 aa3.75□□□□□ -1.81
SCFD1-212ENST00000554486 SCGB1C2P0DMR2 95 aa3.75□□□□□ -1.81
SCFD1-212ENST00000554486 ST20-AS1Q8NBB2 130 aa3.75□□□□□ -1.81
SCFD1-212ENST00000554486 OCR1Q9BZK8 76 aa3.75□□□□□ -1.81
SCFD1-212ENST00000554486 ABCA13Q86UQ4 5058 aa3.75□□□□□ -1.81
SCFD1-212ENST00000554486 FAT3Q8TDW7 4589 aa3.74□□□□□ -1.81
SCFD1-212ENST00000554486 A0A1B0GX51 115 aa3.74□□□□□ -1.81
SCFD1-212ENST00000554486 LST1O00453 97 aa3.74□□□□□ -1.81
SCFD1-212ENST00000554486 SLC25A20O43772 301 aa3.74□□□□□ -1.81
SCFD1-212ENST00000554486 TCL1BO95988 128 aa3.74□□□□□ -1.81
SCFD1-212ENST00000554486 DSCR10P59022 87 aa3.74□□□□□ -1.81
SCFD1-212ENST00000554486 SPRR4Q96PI1 79 aa3.74□□□□□ -1.81
SCFD1-212ENST00000554486 KRTAP1-4P0C5Y4 121 aa3.73□□□□□ -1.81
SCFD1-212ENST00000554486 FABP2P12104 132 aa3.73□□□□□ -1.81
SCFD1-212ENST00000554486 Q6ZQY7 126 aa3.73□□□□□ -1.81
SCFD1-212ENST00000554486 ANAPC11Q9NYG5 84 aa3.73□□□□□ -1.81
SCFD1-212ENST00000554486 TNXBP22105 4242 aa3.72□□□□□ -1.81
SCFD1-212ENST00000554486 MYCBP2O75592 4640 aa3.72□□□□□ -1.81
SCFD1-212ENST00000554486 IGLV5-48A0A075B6I7 105 aa3.72□□□□□ -1.81
SCFD1-212ENST00000554486 TRACP01848 142 aa3.72□□□□□ -1.81
SCFD1-212ENST00000554486 LINC00483Q53H64 154 aa3.72□□□□□ -1.81
SCFD1-212ENST00000554486 LYRM7Q5U5X0 104 aa3.72□□□□□ -1.81
SCFD1-212ENST00000554486 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.72□□□□□ -1.81
SCFD1-212ENST00000554486 ZNF706Q9Y5V0 76 aaPredicted RBP3.72□□□□□ -1.81
SCFD1-212ENST00000554486 LRP1Q07954 4544 aaKnown RBP3.71□□□□□ -1.81
SCFD1-212ENST00000554486 TRBV20-1A0A075B6N2 111 aa3.71□□□□□ -1.82
SCFD1-212ENST00000554486 SPRR1BP22528 89 aa3.71□□□□□ -1.82
SCFD1-212ENST00000554486 ATXN8Q156A1 80 aa3.71□□□□□ -1.82
SCFD1-212ENST00000554486 LCE3CQ5T5A8 94 aa3.71□□□□□ -1.82
SCFD1-212ENST00000554486 DEFB105AQ8NG35 78 aa3.71□□□□□ -1.82
SCFD1-212ENST00000554486 SPCS1Q9Y6A9 102 aa3.71□□□□□ -1.82
SCFD1-212ENST00000554486 TEX49A0A1B0GTD5 131 aa3.7□□□□□ -1.82
SCFD1-212ENST00000554486 K7EP34 96 aa3.7□□□□□ -1.82
SCFD1-212ENST00000554486 SNCGO76070 127 aa3.7□□□□□ -1.82
SCFD1-212ENST00000554486 DNAL4O96015 105 aa3.7□□□□□ -1.82
SCFD1-212ENST00000554486 H3BMG7 143 aa3.69□□□□□ -1.82
SCFD1-212ENST00000554486 FAM229BQ4G0N7 80 aa3.69□□□□□ -1.82
SCFD1-212ENST00000554486 KRTAP13-2Q52LG2 175 aa3.69□□□□□ -1.82
SCFD1-212ENST00000554486 OCIAD2Q56VL3 154 aa3.69□□□□□ -1.82
SCFD1-212ENST00000554486 C3orf22Q8N5N4 141 aa3.69□□□□□ -1.82
SCFD1-212ENST00000554486 ORMDL1Q9P0S3 153 aa3.69□□□□□ -1.82
SCFD1-212ENST00000554486 PCLOQ9Y6V0 5065 aa3.69□□□□□ -1.82
SCFD1-212ENST00000554486 A0A1B0GV90 55 aa3.68□□□□□ -1.82
SCFD1-212ENST00000554486 KRTAP9-6A8MVA2 160 aa3.68□□□□□ -1.82
SCFD1-212ENST00000554486 C9JAW5 83 aa3.68□□□□□ -1.82
SCFD1-212ENST00000554486 BAALC-AS2P0C853 105 aa3.68□□□□□ -1.82
SCFD1-212ENST00000554486 MTURNQ8N3F0 131 aa3.68□□□□□ -1.82
SCFD1-212ENST00000554486 PPDPFLQ8WWR9 84 aa3.68□□□□□ -1.82
SCFD1-212ENST00000554486 LINC01600Q96MT4 127 aa3.68□□□□□ -1.82
SCFD1-212ENST00000554486 H3BQ85 93 aa3.67□□□□□ -1.82
SCFD1-212ENST00000554486 TMEM256-PLSCR3K7ERE1 68 aa3.67□□□□□ -1.82
SCFD1-212ENST00000554486 CRYGAP11844 174 aa3.67□□□□□ -1.82
SCFD1-212ENST00000554486 PRO0461Q9UI25 63 aa3.67□□□□□ -1.82
SCFD1-212ENST00000554486 MT1HL1P0DM35 61 aa3.66□□□□□ -1.82
SCFD1-212ENST00000554486 KRTAP10-8P60410 259 aa3.66□□□□□ -1.82
SCFD1-212ENST00000554486 MOBPQ13875 183 aa3.66□□□□□ -1.82
SCFD1-212ENST00000554486 GTF2H5Q6ZYL4 71 aa3.66□□□□□ -1.82
SCFD1-212ENST00000554486 LAMTOR3Q9UHA4 124 aa3.66□□□□□ -1.82
SCFD1-212ENST00000554486 DMBT1Q9UGM3 2413 aaPredicted RBP3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms