RNA–Protein interactions for RNA: ENST00000554131.5

PSEN1-210, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-210ENST00000554131 C9orf118A6NHY6 69 aa10.71□□□□□ -0.69
PSEN1-210ENST00000554131 SCGB1C2P0DMR2 95 aa10.71□□□□□ -0.69
PSEN1-210ENST00000554131 PPDPFLQ8WWR9 84 aa10.71□□□□□ -0.69
PSEN1-210ENST00000554131 LAMTOR3Q9UHA4 124 aa10.71□□□□□ -0.69
PSEN1-210ENST00000554131 H3BUT2 72 aa10.7□□□□□ -0.7
PSEN1-210ENST00000554131 SNCGO76070 127 aa10.7□□□□□ -0.7
PSEN1-210ENST00000554131 OCIAD2Q56VL3 154 aa10.7□□□□□ -0.7
PSEN1-210ENST00000554131 TRACP01848 142 aa10.69□□□□□ -0.7
PSEN1-210ENST00000554131 SSBP3-AS1Q7Z2R9 100 aa10.69□□□□□ -0.7
PSEN1-210ENST00000554131 Q8NBF4 154 aa10.69□□□□□ -0.7
PSEN1-210ENST00000554131 TCL1BO95988 128 aa10.68□□□□□ -0.7
PSEN1-210ENST00000554131 C9orf153Q5TBE3 101 aa10.67□□□□□ -0.7
PSEN1-210ENST00000554131 LINC00304Q8N9R0 145 aa10.67□□□□□ -0.7
PSEN1-210ENST00000554131 COL5A1-AS1Q5SY13 56 aa10.66□□□□□ -0.7
PSEN1-210ENST00000554131 IGLV8-61A0A075B6I0 122 aa10.64□□□□□ -0.71
PSEN1-210ENST00000554131 A0A1W2PPM0 123 aa10.64□□□□□ -0.71
PSEN1-210ENST00000554131 DNAL4O96015 105 aa10.64□□□□□ -0.71
PSEN1-210ENST00000554131 ORMDL1Q9P0S3 153 aa10.63□□□□□ -0.71
PSEN1-210ENST00000554131 ATXN8Q156A1 80 aa10.62□□□□□ -0.71
PSEN1-210ENST00000554131 LYRM7Q5U5X0 104 aa10.61□□□□□ -0.71
PSEN1-210ENST00000554131 TRBV20-1A0A075B6N2 111 aa10.6□□□□□ -0.71
PSEN1-210ENST00000554131 A0A0G2JQZ4 141 aa10.6□□□□□ -0.71
PSEN1-210ENST00000554131 NDUFV3P56181 108 aaKnown RBP10.6□□□□□ -0.71
PSEN1-210ENST00000554131 SPAG11AQ6PDA7 123 aa10.6□□□□□ -0.71
PSEN1-210ENST00000554131 GHRHP01286 108 aa10.59□□□□□ -0.71
PSEN1-210ENST00000554131 F8WEM9 126 aa10.58□□□□□ -0.72
PSEN1-210ENST00000554131 H3BQ85 93 aa10.58□□□□□ -0.72
PSEN1-210ENST00000554131 FABP2P12104 132 aa10.58□□□□□ -0.72
PSEN1-210ENST00000554131 HMCN2Q8NDA2 5059 aa10.57□□□□□ -0.72
PSEN1-210ENST00000554131 TMEM256-PLSCR3K7ERE1 68 aa10.57□□□□□ -0.72
PSEN1-210ENST00000554131 SPINK1P00995 79 aa10.56□□□□□ -0.72
PSEN1-210ENST00000554131 IGFL1Q6UW32 110 aa10.56□□□□□ -0.72
PSEN1-210ENST00000554131 BAALC-AS2P0C853 105 aa10.54□□□□□ -0.72
PSEN1-210ENST00000554131 RPS29P62273 56 aaKnown RBP10.54□□□□□ -0.72
PSEN1-210ENST00000554131 UBE2V1Q13404 147 aa10.54□□□□□ -0.72
PSEN1-210ENST00000554131 C4orf48Q5BLP8 95 aa10.54□□□□□ -0.72
PSEN1-210ENST00000554131 Q6JHZ5 121 aa10.54□□□□□ -0.72
PSEN1-210ENST00000554131 CD164Q04900 197 aa10.53□□□□□ -0.72
PSEN1-210ENST00000554131 H3BMG7 143 aa10.51□□□□□ -0.73
PSEN1-210ENST00000554131 HRCT1Q6UXD1 115 aa10.51□□□□□ -0.73
PSEN1-210ENST00000554131 SPCS1Q9Y6A9 102 aa10.51□□□□□ -0.73
PSEN1-210ENST00000554131 C9JAW5 83 aa10.49□□□□□ -0.73
PSEN1-210ENST00000554131 ANKRD29Q8N6D5 301 aa10.48□□□□□ -0.73
PSEN1-210ENST00000554131 A0A1B0GV72 72 aa10.45□□□□□ -0.74
PSEN1-210ENST00000554131 K7EP34 96 aa10.45□□□□□ -0.74
PSEN1-210ENST00000554131 Q5XG85 94 aa10.45□□□□□ -0.74
PSEN1-210ENST00000554131 RETNLBQ9BQ08 111 aa10.45□□□□□ -0.74
PSEN1-210ENST00000554131 Q6Q795 121 aa10.44□□□□□ -0.74
PSEN1-210ENST00000554131 MTURNQ8N3F0 131 aa10.44□□□□□ -0.74
PSEN1-210ENST00000554131 TRBV7-4A0A0J9YYF1 115 aa10.43□□□□□ -0.74
PSEN1-210ENST00000554131 TRBV7-7A0A0K0K1E9 115 aa10.43□□□□□ -0.74
PSEN1-210ENST00000554131 H3BT86 120 aa10.43□□□□□ -0.74
PSEN1-210ENST00000554131 A0A1W2PNM2 257 aa10.42□□□□□ -0.74
PSEN1-210ENST00000554131 SMCPP49901 116 aaPredicted RBP10.41□□□□□ -0.74
PSEN1-210ENST00000554131 OBSCN-AS1Q96MR7 158 aa10.41□□□□□ -0.74
PSEN1-210ENST00000554131 LIMD2Q9BT23 127 aa10.41□□□□□ -0.74
PSEN1-210ENST00000554131 PRO0461Q9UI25 63 aa10.41□□□□□ -0.74
PSEN1-210ENST00000554131 RBM3P98179 157 aaKnown RBP10.4□□□□□ -0.74
PSEN1-210ENST00000554131 TEN1Q86WV5 123 aa10.39□□□□□ -0.75
PSEN1-210ENST00000554131 LPAP08519 4548 aa10.38□□□□□ -0.75
PSEN1-210ENST00000554131 PRR4Q16378 134 aa10.37□□□□□ -0.75
PSEN1-210ENST00000554131 JMJD7-PLA2G4BH0Y9G9 81 aa10.36□□□□□ -0.75
PSEN1-210ENST00000554131 ASB16-AS1Q495Z4 193 aa10.35□□□□□ -0.75
PSEN1-210ENST00000554131 GTF2H5Q6ZYL4 71 aa10.34□□□□□ -0.75
PSEN1-210ENST00000554131 FP248Q71RG6 208 aaPredicted RBP10.34□□□□□ -0.75
PSEN1-210ENST00000554131 DSCR8Q96T75 97 aa10.34□□□□□ -0.75
PSEN1-210ENST00000554131 LOC110117498A0A087WWA1 95 aa10.33□□□□□ -0.76
PSEN1-210ENST00000554131 CCKP06307 115 aa10.33□□□□□ -0.76
PSEN1-210ENST00000554131 C1orf195Q5TG92 126 aa10.33□□□□□ -0.76
PSEN1-210ENST00000554131 LRP2P98164 4655 aa10.32□□□□□ -0.76
PSEN1-210ENST00000554131 Q6ZQT0 140 aa10.32□□□□□ -0.76
PSEN1-210ENST00000554131 A0A087WSZ3 146 aa10.31□□□□□ -0.76
PSEN1-210ENST00000554131 C14orf132Q9NPU4 83 aa10.31□□□□□ -0.76
PSEN1-210ENST00000554131 IGLV7-46A0A075B6I9 117 aa10.3□□□□□ -0.76
PSEN1-210ENST00000554131 Q96NJ1 140 aa10.26□□□□□ -0.77
PSEN1-210ENST00000554131 SS18L2Q9UHA2 77 aa10.26□□□□□ -0.77
PSEN1-210ENST00000554131 PDE6GP18545 87 aa10.25□□□□□ -0.77
PSEN1-210ENST00000554131 TPRXLQ17RH7 258 aa10.25□□□□□ -0.77
PSEN1-210ENST00000554131 VPS25Q9BRG1 176 aa10.25□□□□□ -0.77
PSEN1-210ENST00000554131 A0A1B0GV90 55 aa10.24□□□□□ -0.77
PSEN1-210ENST00000554131 F8W1H4 67 aa10.24□□□□□ -0.77
PSEN1-210ENST00000554131 KRTAP13-3Q3SY46 172 aa10.24□□□□□ -0.77
PSEN1-210ENST00000554131 A0A1B0GW54 56 aa10.19□□□□□ -0.78
PSEN1-210ENST00000554131 LINC00472Q9H8W2 130 aa10.18□□□□□ -0.78
PSEN1-210ENST00000554131 C21orf62-AS1Q17RA5 79 aa10.17□□□□□ -0.78
PSEN1-210ENST00000554131 ETDBQ3ZM63 59 aa10.15□□□□□ -0.78
PSEN1-210ENST00000554131 UBR4Q5T4S7 5183 aa10.14□□□□□ -0.79
PSEN1-210ENST00000554131 DEFB116Q30KQ4 102 aa10.1□□□□□ -0.79
PSEN1-210ENST00000554131 CDIP1Q9H305 208 aa10.09□□□□□ -0.79
PSEN1-210ENST00000554131 C9orf92A6NGG3 77 aa10.08□□□□□ -0.8
PSEN1-210ENST00000554131 MUC17Q685J3 4493 aa10.07□□□□□ -0.8
PSEN1-210ENST00000554131 IGKV4-1P06312 121 aa10.07□□□□□ -0.8
PSEN1-210ENST00000554131 XP32Q5T750 250 aa10.07□□□□□ -0.8
PSEN1-210ENST00000554131 SIGMAR1Q99720 223 aa10.04□□□□□ -0.8
PSEN1-210ENST00000554131 NREPQ16612 68 aa10.02□□□□□ -0.81
PSEN1-210ENST00000554131 LINC00846Q9NV44 126 aa10.01□□□□□ -0.81
PSEN1-210ENST00000554131 J3KT08 172 aa10□□□□□ -0.81
PSEN1-210ENST00000554131 Q6ZVQ6 151 aa9.99□□□□□ -0.81
PSEN1-210ENST00000554131 NOTCH2NLQ7Z3S9 236 aa9.97□□□□□ -0.81
PSEN1-210ENST00000554131 DSCR10P59022 87 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms