RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 C6orf99Q4VX62 202 aa3.75□□□□□ -1.81
SLIRP-203ENST00000554074 SSBP3-AS1Q7Z2R9 100 aa3.75□□□□□ -1.81
SLIRP-203ENST00000554074 SMIM11BQ8TCY0 68 aa3.75□□□□□ -1.81
SLIRP-203ENST00000554074 PRO1854Q9UHT4 67 aa3.75□□□□□ -1.81
SLIRP-203ENST00000554074 H0YGX0 51 aa3.74□□□□□ -1.81
SLIRP-203ENST00000554074 FXYD2P54710 66 aa3.74□□□□□ -1.81
SLIRP-203ENST00000554074 KRTAP13-3Q3SY46 172 aa3.74□□□□□ -1.81
SLIRP-203ENST00000554074 PRO1933Q9H354 126 aa3.74□□□□□ -1.81
SLIRP-203ENST00000554074 A0A1B0GX51 115 aa3.73□□□□□ -1.81
SLIRP-203ENST00000554074 COX6CP09669 75 aa3.73□□□□□ -1.81
SLIRP-203ENST00000554074 GAGE2AQ6NT46 116 aa3.73□□□□□ -1.81
SLIRP-203ENST00000554074 Q9BRP9 147 aa3.73□□□□□ -1.81
SLIRP-203ENST00000554074 H3BQ85 93 aa3.72□□□□□ -1.81
SLIRP-203ENST00000554074 ERC2-IT1O76042 136 aa3.72□□□□□ -1.81
SLIRP-203ENST00000554074 MOBPQ13875 183 aa3.72□□□□□ -1.81
SLIRP-203ENST00000554074 ASB16-AS1Q495Z4 193 aa3.72□□□□□ -1.81
SLIRP-203ENST00000554074 OCIAD2Q56VL3 154 aa3.72□□□□□ -1.81
SLIRP-203ENST00000554074 LCE3BQ5TA77 95 aa3.72□□□□□ -1.81
SLIRP-203ENST00000554074 LINC00575Q6W349 94 aa3.72□□□□□ -1.81
SLIRP-203ENST00000554074 KRTAP19-1Q8IUB9 90 aa3.72□□□□□ -1.81
SLIRP-203ENST00000554074 Q8N377 158 aa3.72□□□□□ -1.81
SLIRP-203ENST00000554074 PPDPFLQ8WWR9 84 aa3.72□□□□□ -1.81
SLIRP-203ENST00000554074 MUC17Q685J3 4493 aa3.71□□□□□ -1.82
SLIRP-203ENST00000554074 hADV29S1A0JD25 119 aa3.71□□□□□ -1.82
SLIRP-203ENST00000554074 SPRR1BP22528 89 aa3.71□□□□□ -1.82
SLIRP-203ENST00000554074 Q1RN00 199 aa3.71□□□□□ -1.82
SLIRP-203ENST00000554074 IGLV5-48A0A075B6I7 105 aa3.7□□□□□ -1.82
SLIRP-203ENST00000554074 IGLV9-49A0A0B4J1Y8 123 aa3.7□□□□□ -1.82
SLIRP-203ENST00000554074 TEX49A0A1B0GTD5 131 aa3.7□□□□□ -1.82
SLIRP-203ENST00000554074 H7C2G1 150 aa3.7□□□□□ -1.82
SLIRP-203ENST00000554074 SEC61BP60468 96 aaKnown RBP3.7□□□□□ -1.82
SLIRP-203ENST00000554074 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.7□□□□□ -1.82
SLIRP-203ENST00000554074 LYRM7Q5U5X0 104 aa3.69□□□□□ -1.82
SLIRP-203ENST00000554074 LAMTOR3Q9UHA4 124 aa3.69□□□□□ -1.82
SLIRP-203ENST00000554074 TRIAP1O43715 76 aa3.68□□□□□ -1.82
SLIRP-203ENST00000554074 PSMB2P49721 201 aa3.68□□□□□ -1.82
SLIRP-203ENST00000554074 KRTAP9-9Q9BYP9 154 aa3.68□□□□□ -1.82
SLIRP-203ENST00000554074 KRTAP9-4Q9BYQ2 154 aa3.68□□□□□ -1.82
SLIRP-203ENST00000554074 K7ERJ3 54 aa3.67□□□□□ -1.82
SLIRP-203ENST00000554074 C9orf153Q5TBE3 101 aa3.67□□□□□ -1.82
SLIRP-203ENST00000554074 FSIP2Q5CZC0 6907 aa3.67□□□□□ -1.82
SLIRP-203ENST00000554074 DNAL4O96015 105 aa3.66□□□□□ -1.82
SLIRP-203ENST00000554074 TRACP01848 142 aa3.66□□□□□ -1.82
SLIRP-203ENST00000554074 SCGB1C2P0DMR2 95 aa3.66□□□□□ -1.82
SLIRP-203ENST00000554074 LINC01547P58512 204 aaPredicted RBP3.66□□□□□ -1.82
SLIRP-203ENST00000554074 Q6ZQY7 126 aa3.66□□□□□ -1.82
SLIRP-203ENST00000554074 ST20-AS1Q8NBB2 130 aa3.66□□□□□ -1.82
SLIRP-203ENST00000554074 LIMD2Q9BT23 127 aa3.66□□□□□ -1.82
SLIRP-203ENST00000554074 TRBV20-1A0A075B6N2 111 aa3.65□□□□□ -1.83
SLIRP-203ENST00000554074 F8WEM9 126 aa3.65□□□□□ -1.83
SLIRP-203ENST00000554074 CD164Q04900 197 aa3.65□□□□□ -1.83
SLIRP-203ENST00000554074 Q6JHZ5 121 aa3.65□□□□□ -1.83
SLIRP-203ENST00000554074 KRTAP4-1Q9BYQ7 146 aa3.65□□□□□ -1.83
SLIRP-203ENST00000554074 CRCT1Q9UGL9 99 aa3.65□□□□□ -1.83
SLIRP-203ENST00000554074 IGLV8-61A0A075B6I0 122 aa3.64□□□□□ -1.83
SLIRP-203ENST00000554074 TMEM256-PLSCR3K7ERE1 68 aa3.64□□□□□ -1.83
SLIRP-203ENST00000554074 LST1O00453 97 aa3.64□□□□□ -1.83
SLIRP-203ENST00000554074 COL5A1-AS1Q5SY13 56 aa3.64□□□□□ -1.83
SLIRP-203ENST00000554074 SMIM29Q86T20 159 aa3.64□□□□□ -1.83
SLIRP-203ENST00000554074 DEFB105AQ8NG35 78 aa3.64□□□□□ -1.83
SLIRP-203ENST00000554074 FAM218AQ96MZ4 157 aa3.64□□□□□ -1.83
SLIRP-203ENST00000554074 SNHG12Q9BXW3 62 aa3.64□□□□□ -1.83
SLIRP-203ENST00000554074 ORMDL1Q9P0S3 153 aa3.64□□□□□ -1.83
SLIRP-203ENST00000554074 C9orf118A6NHY6 69 aa3.63□□□□□ -1.83
SLIRP-203ENST00000554074 ATXN8Q156A1 80 aa3.63□□□□□ -1.83
SLIRP-203ENST00000554074 BATFQ16520 125 aa3.63□□□□□ -1.83
SLIRP-203ENST00000554074 Q5XG85 94 aa3.63□□□□□ -1.83
SLIRP-203ENST00000554074 UBE2V1Q13404 147 aa3.62□□□□□ -1.83
SLIRP-203ENST00000554074 CLEC2BQ92478 149 aa3.62□□□□□ -1.83
SLIRP-203ENST00000554074 TAX1BP3O14907 124 aa3.61□□□□□ -1.83
SLIRP-203ENST00000554074 FABP2P12104 132 aa3.61□□□□□ -1.83
SLIRP-203ENST00000554074 NDUFV3P56181 108 aaKnown RBP3.61□□□□□ -1.83
SLIRP-203ENST00000554074 C21orf62-AS1Q17RA5 79 aa3.61□□□□□ -1.83
SLIRP-203ENST00000554074 A0A1W2PPM0 123 aa3.6□□□□□ -1.83
SLIRP-203ENST00000554074 H3BUT2 72 aa3.6□□□□□ -1.83
SLIRP-203ENST00000554074 HRCT1Q6UXD1 115 aa3.6□□□□□ -1.83
SLIRP-203ENST00000554074 KRTAP4-8A0A0G2JLE6 195 aa3.59□□□□□ -1.83
SLIRP-203ENST00000554074 TCL1BO95988 128 aa3.59□□□□□ -1.83
SLIRP-203ENST00000554074 BAALC-AS2P0C853 105 aa3.59□□□□□ -1.83
SLIRP-203ENST00000554074 KRTAP19-2Q3LHN2 52 aa3.59□□□□□ -1.83
SLIRP-203ENST00000554074 Q6Q795 121 aa3.59□□□□□ -1.83
SLIRP-203ENST00000554074 PCP4L1A6NKN8 68 aa3.58□□□□□ -1.84
SLIRP-203ENST00000554074 JMJD7-PLA2G4BH0Y9G9 81 aa3.58□□□□□ -1.84
SLIRP-203ENST00000554074 H3BMG7 143 aa3.58□□□□□ -1.84
SLIRP-203ENST00000554074 PCOTHQ58A44 107 aa3.58□□□□□ -1.84
SLIRP-203ENST00000554074 A0A1B0GW54 56 aa3.57□□□□□ -1.84
SLIRP-203ENST00000554074 C9orf92A6NGG3 77 aa3.57□□□□□ -1.84
SLIRP-203ENST00000554074 H3BT86 120 aa3.57□□□□□ -1.84
SLIRP-203ENST00000554074 PDE6GP18545 87 aa3.57□□□□□ -1.84
SLIRP-203ENST00000554074 RBM3P98179 157 aaKnown RBP3.57□□□□□ -1.84
SLIRP-203ENST00000554074 C1orf195Q5TG92 126 aa3.57□□□□□ -1.84
SLIRP-203ENST00000554074 IGFL1Q6UW32 110 aa3.57□□□□□ -1.84
SLIRP-203ENST00000554074 TEN1Q86WV5 123 aa3.57□□□□□ -1.84
SLIRP-203ENST00000554074 ANKRD29Q8N6D5 301 aa3.57□□□□□ -1.84
SLIRP-203ENST00000554074 TRBV7-4A0A0J9YYF1 115 aa3.56□□□□□ -1.84
SLIRP-203ENST00000554074 TRBV7-7A0A0K0K1E9 115 aa3.56□□□□□ -1.84
SLIRP-203ENST00000554074 NAA38Q9BRA0 125 aaKnown RBP3.56□□□□□ -1.84
SLIRP-203ENST00000554074 SS18L2Q9UHA2 77 aa3.56□□□□□ -1.84
SLIRP-203ENST00000554074 SPCS1Q9Y6A9 102 aa3.56□□□□□ -1.84
SLIRP-203ENST00000554074 C9JAW5 83 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms