RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 DLEU1O43261 78 aa11.29□□□□□ -0.6
HIF1A-206ENST00000553999 LCE2AQ5TA79 106 aaPredicted RBP11.29□□□□□ -0.6
HIF1A-206ENST00000553999 C1orf195Q5TG92 126 aa11.29□□□□□ -0.6
HIF1A-206ENST00000553999 CFC1BP0CG36 223 aa11.28□□□□□ -0.6
HIF1A-206ENST00000553999 CFC1P0CG37 223 aa11.28□□□□□ -0.6
HIF1A-206ENST00000553999 C2orf91Q6ZV80 131 aa11.28□□□□□ -0.6
HIF1A-206ENST00000553999 BVES-AS1Q5T3Y7 98 aa11.26□□□□□ -0.61
HIF1A-206ENST00000553999 PCOTHQ58A44 107 aa11.25□□□□□ -0.61
HIF1A-206ENST00000553999 H3BUT2 72 aa11.23□□□□□ -0.61
HIF1A-206ENST00000553999 IGFL1Q6UW32 110 aa11.23□□□□□ -0.61
HIF1A-206ENST00000553999 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.23□□□□□ -0.61
HIF1A-206ENST00000553999 HIGD1BQ9P298 99 aa11.23□□□□□ -0.61
HIF1A-206ENST00000553999 Q5XG85 94 aa11.21□□□□□ -0.61
HIF1A-206ENST00000553999 SNHG12Q9BXW3 62 aa11.21□□□□□ -0.61
HIF1A-206ENST00000553999 TCL1BO95988 128 aa11.2□□□□□ -0.62
HIF1A-206ENST00000553999 OCIAD2Q56VL3 154 aa11.2□□□□□ -0.62
HIF1A-206ENST00000553999 CLEC2BQ92478 149 aa11.2□□□□□ -0.62
HIF1A-206ENST00000553999 FAM218AQ96MZ4 157 aa11.2□□□□□ -0.62
HIF1A-206ENST00000553999 TMA7Q9Y2S6 64 aaKnown RBP11.2□□□□□ -0.62
HIF1A-206ENST00000553999 A0A0B4J2C4 111 aa11.19□□□□□ -0.62
HIF1A-206ENST00000553999 CEND1Q8N111 149 aa11.19□□□□□ -0.62
HIF1A-206ENST00000553999 Q6JHZ5 121 aa11.18□□□□□ -0.62
HIF1A-206ENST00000553999 IGLV8-61A0A075B6I0 122 aa11.17□□□□□ -0.62
HIF1A-206ENST00000553999 TRBV7-7A0A0K0K1E9 115 aa11.17□□□□□ -0.62
HIF1A-206ENST00000553999 FXYD2P54710 66 aa11.17□□□□□ -0.62
HIF1A-206ENST00000553999 PYY3Q5JQD4 70 aa11.14□□□□□ -0.63
HIF1A-206ENST00000553999 PRO1854Q9UHT4 67 aa11.12□□□□□ -0.63
HIF1A-206ENST00000553999 TMEM238LA0A1B0GVL6 79 aa11.11□□□□□ -0.63
HIF1A-206ENST00000553999 A6NJY4 79 aa11.11□□□□□ -0.63
HIF1A-206ENST00000553999 K7ERJ3 54 aa11.11□□□□□ -0.63
HIF1A-206ENST00000553999 H0YGX0 51 aa11.1□□□□□ -0.63
HIF1A-206ENST00000553999 PPDPFLQ8WWR9 84 aa11.1□□□□□ -0.63
HIF1A-206ENST00000553999 SNCGO76070 127 aa11.09□□□□□ -0.63
HIF1A-206ENST00000553999 KRTAP9-2Q9BYQ4 174 aa11.09□□□□□ -0.63
HIF1A-206ENST00000553999 A0A1B0GV72 72 aa11.08□□□□□ -0.64
HIF1A-206ENST00000553999 TRIAP1O43715 76 aa11.08□□□□□ -0.64
HIF1A-206ENST00000553999 FABP2P12104 132 aa11.08□□□□□ -0.64
HIF1A-206ENST00000553999 NDUFV3P56181 108 aaKnown RBP11.07□□□□□ -0.64
HIF1A-206ENST00000553999 RPL37P61927 97 aaKnown RBP11.06□□□□□ -0.64
HIF1A-206ENST00000553999 HSD52Q0P140 79 aa11.04□□□□□ -0.64
HIF1A-206ENST00000553999 PSMB2P49721 201 aa11.03□□□□□ -0.64
HIF1A-206ENST00000553999 OBSCN-AS1Q96MR7 158 aa11.03□□□□□ -0.64
HIF1A-206ENST00000553999 LST1O00453 97 aa11.02□□□□□ -0.65
HIF1A-206ENST00000553999 H3BMG7 143 aa11.01□□□□□ -0.65
HIF1A-206ENST00000553999 LCE2CQ5TA81 110 aa11□□□□□ -0.65
HIF1A-206ENST00000553999 A0A087WSZ3 146 aa10.98□□□□□ -0.65
HIF1A-206ENST00000553999 KRTAP19-2Q3LHN2 52 aa10.98□□□□□ -0.65
HIF1A-206ENST00000553999 DNAL4O96015 105 aa10.96□□□□□ -0.65
HIF1A-206ENST00000553999 UQCR10Q9UDW1 63 aa10.96□□□□□ -0.65
HIF1A-206ENST00000553999 A0A1B0GX51 115 aa10.95□□□□□ -0.66
HIF1A-206ENST00000553999 TEN1Q86WV5 123 aa10.95□□□□□ -0.66
HIF1A-206ENST00000553999 SS18L2Q9UHA2 77 aa10.95□□□□□ -0.66
HIF1A-206ENST00000553999 Q6Q795 121 aa10.93□□□□□ -0.66
HIF1A-206ENST00000553999 Q96NJ1 140 aa10.92□□□□□ -0.66
HIF1A-206ENST00000553999 ORMDL1Q9P0S3 153 aa10.92□□□□□ -0.66
HIF1A-206ENST00000553999 A0A1W2PNM2 257 aa10.91□□□□□ -0.66
HIF1A-206ENST00000553999 MT1HP80294 61 aa10.9□□□□□ -0.66
HIF1A-206ENST00000553999 GHRHP01286 108 aa10.89□□□□□ -0.67
HIF1A-206ENST00000553999 SIGMAR1Q99720 223 aa10.89□□□□□ -0.67
HIF1A-206ENST00000553999 COX6CP09669 75 aa10.88□□□□□ -0.67
HIF1A-206ENST00000553999 COX6B2Q6YFQ2 88 aa10.88□□□□□ -0.67
HIF1A-206ENST00000553999 ANKRD29Q8N6D5 301 aa10.87□□□□□ -0.67
HIF1A-206ENST00000553999 DSCR10P59022 87 aa10.86□□□□□ -0.67
HIF1A-206ENST00000553999 ATP11AUNQ6ZP68 121 aa10.86□□□□□ -0.67
HIF1A-206ENST00000553999 SCGB1C2P0DMR2 95 aa10.85□□□□□ -0.67
HIF1A-206ENST00000553999 Q75L30 129 aa10.84□□□□□ -0.67
HIF1A-206ENST00000553999 DEFB116Q30KQ4 102 aa10.81□□□□□ -0.68
HIF1A-206ENST00000553999 VPS25Q9BRG1 176 aa10.8□□□□□ -0.68
HIF1A-206ENST00000553999 TMEM256-PLSCR3K7ERE1 68 aa10.79□□□□□ -0.68
HIF1A-206ENST00000553999 CCKP06307 115 aa10.79□□□□□ -0.68
HIF1A-206ENST00000553999 NAA38Q9BRA0 125 aaKnown RBP10.79□□□□□ -0.68
HIF1A-206ENST00000553999 M0R2T5 61 aa10.78□□□□□ -0.68
HIF1A-206ENST00000553999 IGKV4-1P06312 121 aa10.78□□□□□ -0.68
HIF1A-206ENST00000553999 TRBV7-4A0A0J9YYF1 115 aa10.76□□□□□ -0.69
HIF1A-206ENST00000553999 TRACP01848 142 aa10.76□□□□□ -0.69
HIF1A-206ENST00000553999 H3BQ85 93 aa10.75□□□□□ -0.69
HIF1A-206ENST00000553999 C20orf166-AS1Q96NR2 134 aa10.73□□□□□ -0.69
HIF1A-206ENST00000553999 A8MUU9 505 aa10.72□□□□□ -0.69
HIF1A-206ENST00000553999 UBE2V1Q13404 147 aa10.72□□□□□ -0.69
HIF1A-206ENST00000553999 KRTAP9-6A0A140TA67 174 aa10.7□□□□□ -0.7
HIF1A-206ENST00000553999 NOTCH2NLQ7Z3S9 236 aa10.69□□□□□ -0.7
HIF1A-206ENST00000553999 IGHV6-1A0A0B4J1U7 121 aa10.68□□□□□ -0.7
HIF1A-206ENST00000553999 BAALC-AS2P0C853 105 aa10.68□□□□□ -0.7
HIF1A-206ENST00000553999 LINC00313P59037 77 aa10.68□□□□□ -0.7
HIF1A-206ENST00000553999 KRTAP10-6P60371 365 aaPredicted RBP10.68□□□□□ -0.7
HIF1A-206ENST00000553999 M0R143 59 aa10.67□□□□□ -0.7
HIF1A-206ENST00000553999 RBM3P98179 157 aaKnown RBP10.67□□□□□ -0.7
HIF1A-206ENST00000553999 DSCR8Q96T75 97 aa10.66□□□□□ -0.7
HIF1A-206ENST00000553999 LCE2DQ5TA82 110 aaPredicted RBP10.65□□□□□ -0.7
HIF1A-206ENST00000553999 LINC00472Q9H8W2 130 aa10.65□□□□□ -0.7
HIF1A-206ENST00000553999 KRTAP16-1A8MUX0 517 aa10.63□□□□□ -0.71
HIF1A-206ENST00000553999 LORP23490 312 aaPredicted RBP10.63□□□□□ -0.71
HIF1A-206ENST00000553999 BATFQ16520 125 aa10.62□□□□□ -0.71
HIF1A-206ENST00000553999 SMIM6P0DI80 62 aa10.61□□□□□ -0.71
HIF1A-206ENST00000553999 ATXN8Q156A1 80 aa10.6□□□□□ -0.71
HIF1A-206ENST00000553999 C9JAW5 83 aa10.59□□□□□ -0.71
HIF1A-206ENST00000553999 TRBV20-1A0A075B6N2 111 aa10.55□□□□□ -0.72
HIF1A-206ENST00000553999 A0A1B0GVX0 72 aa10.54□□□□□ -0.72
HIF1A-206ENST00000553999 FLGP20930 4061 aaPredicted RBP10.54□□□□□ -0.72
HIF1A-206ENST00000553999 TSTD3H0UI37 97 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 153.6 ms