RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 FAM236AA0A1B0GUQ0 79 aa5.44□□□□□ -1.54
TDP1-208ENST00000553989 FAM236BA0A1B0GV22 79 aa5.44□□□□□ -1.54
TDP1-208ENST00000553989 hADV29S1A0JD25 119 aa5.44□□□□□ -1.54
TDP1-208ENST00000553989 C1orf137Q5JT78 98 aa5.44□□□□□ -1.54
TDP1-208ENST00000553989 SMCR5Q8TEV8 140 aa5.44□□□□□ -1.54
TDP1-208ENST00000553989 C14orf132Q9NPU4 83 aa5.44□□□□□ -1.54
TDP1-208ENST00000553989 TNXBP22105 4242 aa5.44□□□□□ -1.54
TDP1-208ENST00000553989 NCR3O14931 201 aa5.43□□□□□ -1.54
TDP1-208ENST00000553989 BCE1O60756 84 aa5.43□□□□□ -1.54
TDP1-208ENST00000553989 IGLV6-57P01721 117 aa5.43□□□□□ -1.54
TDP1-208ENST00000553989 RBM3P98179 157 aaKnown RBP5.43□□□□□ -1.54
TDP1-208ENST00000553989 C9orf116Q5BN46 136 aaPredicted RBP5.43□□□□□ -1.54
TDP1-208ENST00000553989 UNQ6190/PRO20217Q6UXQ8 127 aa5.43□□□□□ -1.54
TDP1-208ENST00000553989 LOC110117498A0A087WWA1 95 aa5.42□□□□□ -1.54
TDP1-208ENST00000553989 A0A1W2PNN7 141 aa5.42□□□□□ -1.54
TDP1-208ENST00000553989 COX7CP15954 63 aa5.42□□□□□ -1.54
TDP1-208ENST00000553989 HIST1H4AP62805 103 aaKnown RBP5.42□□□□□ -1.54
TDP1-208ENST00000553989 C6orf99Q4VX62 202 aa5.42□□□□□ -1.54
TDP1-208ENST00000553989 PHF5AQ7RTV0 110 aaKnown RBP5.42□□□□□ -1.54
TDP1-208ENST00000553989 C2orf48Q96LS8 159 aa5.42□□□□□ -1.54
TDP1-208ENST00000553989 UBL5Q9BZL1 73 aa5.42□□□□□ -1.54
TDP1-208ENST00000553989 LINC00846Q9NV44 126 aa5.42□□□□□ -1.54
TDP1-208ENST00000553989 PSORS1C2Q9UIG4 136 aa5.42□□□□□ -1.54
TDP1-208ENST00000553989 KRTAP19-4Q3LI73 84 aa5.41□□□□□ -1.54
TDP1-208ENST00000553989 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.41□□□□□ -1.54
TDP1-208ENST00000553989 M0R378 163 aa5.4□□□□□ -1.54
TDP1-208ENST00000553989 DIRC1Q969H9 104 aa5.4□□□□□ -1.54
TDP1-208ENST00000553989 SS18L2Q9UHA2 77 aa5.4□□□□□ -1.54
TDP1-208ENST00000553989 CRYGAP11844 174 aa5.39□□□□□ -1.55
TDP1-208ENST00000553989 C9orf153Q5TBE3 101 aa5.39□□□□□ -1.55
TDP1-208ENST00000553989 PRR26Q8N8Z3 221 aa5.39□□□□□ -1.55
TDP1-208ENST00000553989 DSCR8Q96T75 97 aa5.39□□□□□ -1.55
TDP1-208ENST00000553989 IGLV7-43P04211 117 aa5.38□□□□□ -1.55
TDP1-208ENST00000553989 COX7BP24311 80 aa5.38□□□□□ -1.55
TDP1-208ENST00000553989 C9orf129Q5T035 196 aaKnown RBP5.38□□□□□ -1.55
TDP1-208ENST00000553989 C10orf25Q5T742 122 aa5.38□□□□□ -1.55
TDP1-208ENST00000553989 FAM19A5Q7Z5A7 132 aaPredicted RBP5.38□□□□□ -1.55
TDP1-208ENST00000553989 SERP2Q8N6R1 65 aa5.38□□□□□ -1.55
TDP1-208ENST00000553989 LAMTOR3Q9UHA4 124 aa5.38□□□□□ -1.55
TDP1-208ENST00000553989 TRAV23DV6A0A075B6W5 121 aa5.37□□□□□ -1.55
TDP1-208ENST00000553989 IGKV3D-7A0A0C4DH55 119 aa5.37□□□□□ -1.55
TDP1-208ENST00000553989 PRYO14603 147 aa5.37□□□□□ -1.55
TDP1-208ENST00000553989 UBE2BP63146 152 aa5.37□□□□□ -1.55
TDP1-208ENST00000553989 SMIM20Q8N5G0 67 aa5.37□□□□□ -1.55
TDP1-208ENST00000553989 C6orf48Q9UBA6 75 aa5.37□□□□□ -1.55
TDP1-208ENST00000553989 FAM168BA1KXE4 195 aa5.36□□□□□ -1.55
TDP1-208ENST00000553989 H0Y9J4 135 aa5.36□□□□□ -1.55
TDP1-208ENST00000553989 ZNF73O43830 326 aaPredicted RBP5.36□□□□□ -1.55
TDP1-208ENST00000553989 RPS28P62857 69 aaKnown RBP5.36□□□□□ -1.55
TDP1-208ENST00000553989 Q6ZQT0 140 aa5.36□□□□□ -1.55
TDP1-208ENST00000553989 NDUFC2-KCTD14E9PQ53 114 aa5.35□□□□□ -1.55
TDP1-208ENST00000553989 PRR4Q16378 134 aa5.35□□□□□ -1.55
TDP1-208ENST00000553989 IGLV1-50A0A075B6I6 118 aa5.34□□□□□ -1.55
TDP1-208ENST00000553989 A0A1B0GW54 56 aa5.34□□□□□ -1.55
TDP1-208ENST00000553989 ELOF1P60002 83 aaKnown RBP5.34□□□□□ -1.55
TDP1-208ENST00000553989 CXCL6P80162 114 aa5.34□□□□□ -1.55
TDP1-208ENST00000553989 VPREB1P12018 145 aa5.33□□□□□ -1.56
TDP1-208ENST00000553989 Q6ZQY7 126 aa5.33□□□□□ -1.56
TDP1-208ENST00000553989 Q8NDZ9 215 aa5.33□□□□□ -1.56
TDP1-208ENST00000553989 TLX1NBP0CAT3 122 aa5.32□□□□□ -1.56
TDP1-208ENST00000553989 XP32Q5T750 250 aa5.32□□□□□ -1.56
TDP1-208ENST00000553989 KRTAP11-1Q8IUC1 163 aa5.32□□□□□ -1.56
TDP1-208ENST00000553989 XAGE1AQ9HD64 81 aa5.31□□□□□ -1.56
TDP1-208ENST00000553989 LPAP08519 4548 aa5.31□□□□□ -1.56
TDP1-208ENST00000553989 TRBV7-4A0A0J9YYF1 115 aa5.3□□□□□ -1.56
TDP1-208ENST00000553989 A0A0U1RQV1 116 aa5.3□□□□□ -1.56
TDP1-208ENST00000553989 TMEM258P61165 79 aa5.3□□□□□ -1.56
TDP1-208ENST00000553989 KCNQ1DNQ9H478 68 aa5.3□□□□□ -1.56
TDP1-208ENST00000553989 DHRS4-AS1Q9P1J3 65 aa5.3□□□□□ -1.56
TDP1-208ENST00000553989 TRAV7A0A075B6U4 112 aa5.29□□□□□ -1.56
TDP1-208ENST00000553989 KRTAP1-4P0C5Y4 121 aa5.29□□□□□ -1.56
TDP1-208ENST00000553989 LINC01547P58512 204 aaPredicted RBP5.29□□□□□ -1.56
TDP1-208ENST00000553989 Q6ZVQ6 151 aa5.29□□□□□ -1.56
TDP1-208ENST00000553989 NKAPP1Q8N9T2 125 aa5.29□□□□□ -1.56
TDP1-208ENST00000553989 KRTAP3-1Q9BYR8 98 aa5.29□□□□□ -1.56
TDP1-208ENST00000553989 J3KT08 172 aa5.28□□□□□ -1.56
TDP1-208ENST00000553989 KRTAP7-1Q8IUC3 87 aa5.28□□□□□ -1.56
TDP1-208ENST00000553989 IGLV5-37A0A075B6J1 123 aa5.27□□□□□ -1.57
TDP1-208ENST00000553989 A0A087WVE0 104 aa5.27□□□□□ -1.57
TDP1-208ENST00000553989 ZNF861PO60384 105 aa5.27□□□□□ -1.57
TDP1-208ENST00000553989 FAM19A1Q7Z5A9 133 aa5.27□□□□□ -1.57
TDP1-208ENST00000553989 NREPQ16612 68 aa5.25□□□□□ -1.57
TDP1-208ENST00000553989 NDUFC1O43677 76 aa5.24□□□□□ -1.57
TDP1-208ENST00000553989 IGLV5-48A0A075B6I7 105 aa5.23□□□□□ -1.57
TDP1-208ENST00000553989 ERC2-IT1O76042 136 aa5.23□□□□□ -1.57
TDP1-208ENST00000553989 MRPL55Q7Z7F7 128 aaKnown RBP5.23□□□□□ -1.57
TDP1-208ENST00000553989 TYMSOSQ8TAI1 123 aa5.23□□□□□ -1.57
TDP1-208ENST00000553989 ETDCA0A1B0GVM5 59 aa5.22□□□□□ -1.57
TDP1-208ENST00000553989 SPRR1AP35321 89 aa5.22□□□□□ -1.57
TDP1-208ENST00000553989 A0A087X002 238 aa5.21□□□□□ -1.58
TDP1-208ENST00000553989 A0A0A0MQY5 61 aa5.2□□□□□ -1.58
TDP1-208ENST00000553989 RPL37AP8A6NKH3 93 aa5.2□□□□□ -1.58
TDP1-208ENST00000553989 BPY2O14599 106 aa5.2□□□□□ -1.58
TDP1-208ENST00000553989 UBE2AP49459 152 aa5.2□□□□□ -1.58
TDP1-208ENST00000553989 KLKP1Q107X0 134 aa5.2□□□□□ -1.58
TDP1-208ENST00000553989 Q6ZRX8 168 aa5.2□□□□□ -1.58
TDP1-208ENST00000553989 Q8N377 158 aa5.2□□□□□ -1.58
TDP1-208ENST00000553989 C20orf197Q8N268 126 aa5.19□□□□□ -1.58
TDP1-208ENST00000553989 RETNLBQ9BQ08 111 aa5.19□□□□□ -1.58
TDP1-208ENST00000553989 KRTAP9-2Q9BYQ4 174 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms