RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 DMBT1Q9UGM3 2413 aaPredicted RBP10.6□□□□□ -0.71
PSEN1-208ENST00000553719 TCL1BO95988 128 aa10.6□□□□□ -0.71
PSEN1-208ENST00000553719 TRACP01848 142 aa10.6□□□□□ -0.71
PSEN1-208ENST00000553719 OCIAD2Q56VL3 154 aa10.59□□□□□ -0.71
PSEN1-208ENST00000553719 PPDPFLQ8WWR9 84 aa10.59□□□□□ -0.71
PSEN1-208ENST00000553719 A0A1W2PPM0 123 aa10.58□□□□□ -0.72
PSEN1-208ENST00000553719 DNAL4O96015 105 aa10.58□□□□□ -0.72
PSEN1-208ENST00000553719 HERC1Q15751 4861 aa10.58□□□□□ -0.72
PSEN1-208ENST00000553719 FABP2P12104 132 aa10.56□□□□□ -0.72
PSEN1-208ENST00000553719 ATXN8Q156A1 80 aa10.55□□□□□ -0.72
PSEN1-208ENST00000553719 TYMSOSQ8TAI1 123 aa10.55□□□□□ -0.72
PSEN1-208ENST00000553719 LAMTOR3Q9UHA4 124 aa10.55□□□□□ -0.72
PSEN1-208ENST00000553719 TRBV20-1A0A075B6N2 111 aa10.53□□□□□ -0.72
PSEN1-208ENST00000553719 IGLV9-49A0A0B4J1Y8 123 aa10.53□□□□□ -0.72
PSEN1-208ENST00000553719 MOBPQ13875 183 aa10.53□□□□□ -0.72
PSEN1-208ENST00000553719 J3QL48 77 aa10.52□□□□□ -0.73
PSEN1-208ENST00000553719 Q8NBF4 154 aa10.52□□□□□ -0.73
PSEN1-208ENST00000553719 ORMDL1Q9P0S3 153 aa10.52□□□□□ -0.73
PSEN1-208ENST00000553719 GHRHP01286 108 aa10.5□□□□□ -0.73
PSEN1-208ENST00000553719 SSBP3-AS1Q7Z2R9 100 aa10.5□□□□□ -0.73
PSEN1-208ENST00000553719 IGLV8-61A0A075B6I0 122 aa10.49□□□□□ -0.73
PSEN1-208ENST00000553719 H3BQ85 93 aa10.49□□□□□ -0.73
PSEN1-208ENST00000553719 SPCS1Q9Y6A9 102 aa10.49□□□□□ -0.73
PSEN1-208ENST00000553719 C9orf153Q5TBE3 101 aa10.48□□□□□ -0.73
PSEN1-208ENST00000553719 TMEM256-PLSCR3K7ERE1 68 aa10.46□□□□□ -0.73
PSEN1-208ENST00000553719 NDUFV3P56181 108 aaKnown RBP10.46□□□□□ -0.73
PSEN1-208ENST00000553719 F8WEM9 126 aa10.45□□□□□ -0.74
PSEN1-208ENST00000553719 LINC00304Q8N9R0 145 aa10.45□□□□□ -0.74
PSEN1-208ENST00000553719 UBE2V1Q13404 147 aa10.44□□□□□ -0.74
PSEN1-208ENST00000553719 H3BMG7 143 aa10.43□□□□□ -0.74
PSEN1-208ENST00000553719 BAALC-AS2P0C853 105 aa10.43□□□□□ -0.74
PSEN1-208ENST00000553719 C9JAW5 83 aa10.42□□□□□ -0.74
PSEN1-208ENST00000553719 K7EP34 96 aa10.42□□□□□ -0.74
PSEN1-208ENST00000553719 Q6JHZ5 121 aa10.4□□□□□ -0.74
PSEN1-208ENST00000553719 SPAG11AQ6PDA7 123 aa10.4□□□□□ -0.74
PSEN1-208ENST00000553719 A0A0G2JQZ4 141 aa10.39□□□□□ -0.75
PSEN1-208ENST00000553719 A0A1B0GV72 72 aa10.39□□□□□ -0.75
PSEN1-208ENST00000553719 IGFL1Q6UW32 110 aa10.39□□□□□ -0.75
PSEN1-208ENST00000553719 GTF2H5Q6ZYL4 71 aa10.39□□□□□ -0.75
PSEN1-208ENST00000553719 HMCN2Q8NDA2 5059 aa10.38□□□□□ -0.75
PSEN1-208ENST00000553719 H3BT86 120 aa10.37□□□□□ -0.75
PSEN1-208ENST00000553719 CD164Q04900 197 aa10.37□□□□□ -0.75
PSEN1-208ENST00000553719 MTURNQ8N3F0 131 aa10.37□□□□□ -0.75
PSEN1-208ENST00000553719 ANKRD29Q8N6D5 301 aa10.37□□□□□ -0.75
PSEN1-208ENST00000553719 SPINK1P00995 79 aa10.36□□□□□ -0.75
PSEN1-208ENST00000553719 RPS29P62273 56 aaKnown RBP10.36□□□□□ -0.75
PSEN1-208ENST00000553719 PRO0461Q9UI25 63 aa10.35□□□□□ -0.75
PSEN1-208ENST00000553719 SMCPP49901 116 aaPredicted RBP10.33□□□□□ -0.76
PSEN1-208ENST00000553719 C4orf48Q5BLP8 95 aa10.33□□□□□ -0.76
PSEN1-208ENST00000553719 TRBV7-4A0A0J9YYF1 115 aa10.32□□□□□ -0.76
PSEN1-208ENST00000553719 OBSCN-AS1Q96MR7 158 aa10.32□□□□□ -0.76
PSEN1-208ENST00000553719 Q6Q795 121 aa10.31□□□□□ -0.76
PSEN1-208ENST00000553719 A0A1B0GV90 55 aa10.3□□□□□ -0.76
PSEN1-208ENST00000553719 RBM3P98179 157 aaKnown RBP10.29□□□□□ -0.76
PSEN1-208ENST00000553719 HRCT1Q6UXD1 115 aa10.29□□□□□ -0.76
PSEN1-208ENST00000553719 JMJD7-PLA2G4BH0Y9G9 81 aa10.28□□□□□ -0.76
PSEN1-208ENST00000553719 Q5XG85 94 aa10.28□□□□□ -0.76
PSEN1-208ENST00000553719 A0A1W2PNM2 257 aa10.27□□□□□ -0.77
PSEN1-208ENST00000553719 TRBV7-7A0A0K0K1E9 115 aa10.26□□□□□ -0.77
PSEN1-208ENST00000553719 TEN1Q86WV5 123 aa10.25□□□□□ -0.77
PSEN1-208ENST00000553719 DSCR8Q96T75 97 aa10.24□□□□□ -0.77
PSEN1-208ENST00000553719 LOC110117498A0A087WWA1 95 aa10.23□□□□□ -0.77
PSEN1-208ENST00000553719 LIMD2Q9BT23 127 aa10.23□□□□□ -0.77
PSEN1-208ENST00000553719 F8W1H4 67 aa10.21□□□□□ -0.77
PSEN1-208ENST00000553719 Q6ZQT0 140 aa10.21□□□□□ -0.77
PSEN1-208ENST00000553719 VPS25Q9BRG1 176 aa10.21□□□□□ -0.77
PSEN1-208ENST00000553719 C14orf132Q9NPU4 83 aa10.21□□□□□ -0.77
PSEN1-208ENST00000553719 CCKP06307 115 aa10.2□□□□□ -0.78
PSEN1-208ENST00000553719 RETNLBQ9BQ08 111 aa10.2□□□□□ -0.78
PSEN1-208ENST00000553719 ASB16-AS1Q495Z4 193 aa10.19□□□□□ -0.78
PSEN1-208ENST00000553719 PDE6GP18545 87 aa10.18□□□□□ -0.78
PSEN1-208ENST00000553719 A0A087WSZ3 146 aa10.16□□□□□ -0.78
PSEN1-208ENST00000553719 LPAP08519 4548 aa10.16□□□□□ -0.78
PSEN1-208ENST00000553719 C1orf195Q5TG92 126 aa10.14□□□□□ -0.79
PSEN1-208ENST00000553719 FP248Q71RG6 208 aaPredicted RBP10.14□□□□□ -0.79
PSEN1-208ENST00000553719 LRP2P98164 4655 aa10.14□□□□□ -0.79
PSEN1-208ENST00000553719 SS18L2Q9UHA2 77 aa10.13□□□□□ -0.79
PSEN1-208ENST00000553719 C21orf62-AS1Q17RA5 79 aa10.12□□□□□ -0.79
PSEN1-208ENST00000553719 A0A1B0GW54 56 aa10.11□□□□□ -0.79
PSEN1-208ENST00000553719 ETDBQ3ZM63 59 aa10.11□□□□□ -0.79
PSEN1-208ENST00000553719 PRR4Q16378 134 aa10.1□□□□□ -0.79
PSEN1-208ENST00000553719 Q96NJ1 140 aa10.1□□□□□ -0.79
PSEN1-208ENST00000553719 IGLV7-46A0A075B6I9 117 aa10.06□□□□□ -0.8
PSEN1-208ENST00000553719 LINC00472Q9H8W2 130 aa10.04□□□□□ -0.8
PSEN1-208ENST00000553719 TPRXLQ17RH7 258 aa10.02□□□□□ -0.81
PSEN1-208ENST00000553719 KRTAP13-3Q3SY46 172 aa10.01□□□□□ -0.81
PSEN1-208ENST00000553719 MUC17Q685J3 4493 aa9.93□□□□□ -0.82
PSEN1-208ENST00000553719 DEFB116Q30KQ4 102 aa9.93□□□□□ -0.82
PSEN1-208ENST00000553719 IGKV4-1P06312 121 aa9.92□□□□□ -0.82
PSEN1-208ENST00000553719 NREPQ16612 68 aa9.92□□□□□ -0.82
PSEN1-208ENST00000553719 SIGMAR1Q99720 223 aa9.92□□□□□ -0.82
PSEN1-208ENST00000553719 LINC00846Q9NV44 126 aa9.92□□□□□ -0.82
PSEN1-208ENST00000553719 UBR4Q5T4S7 5183 aa9.9□□□□□ -0.82
PSEN1-208ENST00000553719 J3KT08 172 aa9.89□□□□□ -0.83
PSEN1-208ENST00000553719 Q6ZVQ6 151 aa9.89□□□□□ -0.83
PSEN1-208ENST00000553719 FAM240AA0A1B0GVK7 77 aa9.86□□□□□ -0.83
PSEN1-208ENST00000553719 C9orf92A6NGG3 77 aa9.86□□□□□ -0.83
PSEN1-208ENST00000553719 UBL5Q9BZL1 73 aa9.86□□□□□ -0.83
PSEN1-208ENST00000553719 XP32Q5T750 250 aa9.85□□□□□ -0.83
PSEN1-208ENST00000553719 CDIP1Q9H305 208 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms