RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-222ENST00000553570 TIMM17BO60830 172 aa2.77□□□□□ -1.97
ATXN3-222ENST00000553570 CRYGAP11844 174 aa2.77□□□□□ -1.97
ATXN3-222ENST00000553570 SEC61GP60059 68 aa2.77□□□□□ -1.97
ATXN3-222ENST00000553570 KRTAP10-8P60410 259 aa2.77□□□□□ -1.97
ATXN3-222ENST00000553570 SOSTDC1Q6X4U4 206 aa2.77□□□□□ -1.97
ATXN3-222ENST00000553570 COPS9Q8WXC6 57 aa2.77□□□□□ -1.97
ATXN3-222ENST00000553570 SPANXB1Q9NS25 103 aaPredicted RBP2.77□□□□□ -1.97
ATXN3-222ENST00000553570 TRAV23DV6A0A075B6W5 121 aa2.76□□□□□ -1.97
ATXN3-222ENST00000553570 TRBV10-2A0A0K0K1G8 114 aa2.76□□□□□ -1.97
ATXN3-222ENST00000553570 A8MU10 97 aa2.76□□□□□ -1.97
ATXN3-222ENST00000553570 M0R143 59 aa2.76□□□□□ -1.97
ATXN3-222ENST00000553570 NDUFC2O95298 119 aa2.76□□□□□ -1.97
ATXN3-222ENST00000553570 MT1HL1P0DM35 61 aa2.76□□□□□ -1.97
ATXN3-222ENST00000553570 COX8AP10176 69 aa2.76□□□□□ -1.97
ATXN3-222ENST00000553570 DEFB105AQ8NG35 78 aa2.76□□□□□ -1.97
ATXN3-222ENST00000553570 C14orf144Q96I85 54 aa2.76□□□□□ -1.97
ATXN3-222ENST00000553570 HIST1H4GQ99525 98 aa2.76□□□□□ -1.97
ATXN3-222ENST00000553570 KCNQ1DNQ9H478 68 aa2.76□□□□□ -1.97
ATXN3-222ENST00000553570 SPANXCQ9NY87 97 aa2.76□□□□□ -1.97
ATXN3-222ENST00000553570 CBY1Q9Y3M2 126 aa2.76□□□□□ -1.97
ATXN3-222ENST00000553570 LOC107984156A0A0G2JMH3 177 aa2.75□□□□□ -1.97
ATXN3-222ENST00000553570 DLEU1O43261 78 aa2.75□□□□□ -1.97
ATXN3-222ENST00000553570 ZNF73O43830 326 aaPredicted RBP2.75□□□□□ -1.97
ATXN3-222ENST00000553570 IFITM1P13164 125 aa2.75□□□□□ -1.97
ATXN3-222ENST00000553570 KRTAP12-2P59991 146 aa2.75□□□□□ -1.97
ATXN3-222ENST00000553570 CTAG1AP78358 180 aa2.75□□□□□ -1.97
ATXN3-222ENST00000553570 ARL17AQ8IVW1 177 aa2.75□□□□□ -1.97
ATXN3-222ENST00000553570 LINC00337Q8N6G1 96 aa2.75□□□□□ -1.97
ATXN3-222ENST00000553570 SPANXDQ9BXN6 97 aa2.75□□□□□ -1.97
ATXN3-222ENST00000553570 ZNF706Q9Y5V0 76 aaPredicted RBP2.75□□□□□ -1.97
ATXN3-222ENST00000553570 H7C2G1 150 aa2.74□□□□□ -1.97
ATXN3-222ENST00000553570 IGLV6-57P01721 117 aa2.74□□□□□ -1.97
ATXN3-222ENST00000553570 COX7BP24311 80 aa2.74□□□□□ -1.97
ATXN3-222ENST00000553570 HSD52Q0P140 79 aa2.74□□□□□ -1.97
ATXN3-222ENST00000553570 TAL2Q16559 108 aa2.74□□□□□ -1.97
ATXN3-222ENST00000553570 Q6ZVH6 145 aa2.74□□□□□ -1.97
ATXN3-222ENST00000553570 FAT1Q14517 4588 aa2.74□□□□□ -1.97
ATXN3-222ENST00000553570 ABCA13Q86UQ4 5058 aa2.73□□□□□ -1.97
ATXN3-222ENST00000553570 ERC2-IT1O76042 136 aa2.73□□□□□ -1.97
ATXN3-222ENST00000553570 VAMP3Q15836 100 aa2.73□□□□□ -1.97
ATXN3-222ENST00000553570 BATFQ16520 125 aa2.73□□□□□ -1.97
ATXN3-222ENST00000553570 C6orf99Q4VX62 202 aa2.73□□□□□ -1.97
ATXN3-222ENST00000553570 COL5A1-AS1Q5SY13 56 aa2.73□□□□□ -1.97
ATXN3-222ENST00000553570 C9orf153Q5TBE3 101 aa2.73□□□□□ -1.97
ATXN3-222ENST00000553570 KRTAP13-1Q8IUC0 172 aa2.73□□□□□ -1.97
ATXN3-222ENST00000553570 C3orf22Q8N5N4 141 aa2.73□□□□□ -1.97
ATXN3-222ENST00000553570 SPRR4Q96PI1 79 aa2.73□□□□□ -1.97
ATXN3-222ENST00000553570 SNHG12Q9BXW3 62 aa2.73□□□□□ -1.97
ATXN3-222ENST00000553570 HIGD1BQ9P298 99 aa2.73□□□□□ -1.97
ATXN3-222ENST00000553570 PKHD1L1Q86WI1 4243 aa2.72□□□□□ -1.97
ATXN3-222ENST00000553570 TRAV13-2A0A0B4J235 113 aa2.72□□□□□ -1.97
ATXN3-222ENST00000553570 KRTAP4-16G5E9R7 235 aaPredicted RBP2.72□□□□□ -1.97
ATXN3-222ENST00000553570 SPRR1AP35321 89 aa2.72□□□□□ -1.97
ATXN3-222ENST00000553570 FAM229BQ4G0N7 80 aa2.72□□□□□ -1.97
ATXN3-222ENST00000553570 KRTAP13-2Q52LG2 175 aa2.72□□□□□ -1.97
ATXN3-222ENST00000553570 Q6ZRX8 168 aa2.72□□□□□ -1.97
ATXN3-222ENST00000553570 C2orf91Q6ZV80 131 aa2.72□□□□□ -1.97
ATXN3-222ENST00000553570 LINC00304Q8N9R0 145 aa2.72□□□□□ -1.97
ATXN3-222ENST00000553570 ST20-AS1Q8NBB2 130 aa2.72□□□□□ -1.97
ATXN3-222ENST00000553570 RAB37Q96AX2 223 aa2.72□□□□□ -1.97
ATXN3-222ENST00000553570 Q9BRP9 147 aa2.72□□□□□ -1.97
ATXN3-222ENST00000553570 SLC25A20O43772 301 aa2.71□□□□□ -1.98
ATXN3-222ENST00000553570 MOBPQ13875 183 aa2.71□□□□□ -1.98
ATXN3-222ENST00000553570 BVES-AS1Q5T3Y7 98 aa2.71□□□□□ -1.98
ATXN3-222ENST00000553570 HRCT1Q6UXD1 115 aa2.71□□□□□ -1.98
ATXN3-222ENST00000553570 SMIM11BQ8TCY0 68 aa2.71□□□□□ -1.98
ATXN3-222ENST00000553570 RETNLBQ9BQ08 111 aa2.71□□□□□ -1.98
ATXN3-222ENST00000553570 LAMTOR3Q9UHA4 124 aa2.7□□□□□ -1.98
ATXN3-222ENST00000553570 LRP1Q07954 4544 aaKnown RBP2.69□□□□□ -1.98
ATXN3-222ENST00000553570 A0A1B0GV90 55 aa2.69□□□□□ -1.98
ATXN3-222ENST00000553570 SNCGO76070 127 aa2.69□□□□□ -1.98
ATXN3-222ENST00000553570 ELOF1P60002 83 aaKnown RBP2.69□□□□□ -1.98
ATXN3-222ENST00000553570 LYRM7Q5U5X0 104 aa2.69□□□□□ -1.98
ATXN3-222ENST00000553570 NHP2Q9NX24 153 aaKnown RBP2.69□□□□□ -1.98
ATXN3-222ENST00000553570 TRBV7-6A0A0J9YX20 115 aa2.68□□□□□ -1.98
ATXN3-222ENST00000553570 TEX49A0A1B0GTD5 131 aa2.68□□□□□ -1.98
ATXN3-222ENST00000553570 hADV29S1A0JD25 119 aa2.68□□□□□ -1.98
ATXN3-222ENST00000553570 PSMB2P49721 201 aa2.68□□□□□ -1.98
ATXN3-222ENST00000553570 FXYD2P54710 66 aa2.68□□□□□ -1.98
ATXN3-222ENST00000553570 SPAG11AQ6PDA7 123 aa2.68□□□□□ -1.98
ATXN3-222ENST00000553570 SSBP3-AS1Q7Z2R9 100 aa2.68□□□□□ -1.98
ATXN3-222ENST00000553570 MYCBP2O75592 4640 aa2.68□□□□□ -1.98
ATXN3-222ENST00000553570 F8WEM9 126 aa2.67□□□□□ -1.98
ATXN3-222ENST00000553570 LINC00483Q53H64 154 aa2.67□□□□□ -1.98
ATXN3-222ENST00000553570 PRO1854Q9UHT4 67 aa2.67□□□□□ -1.98
ATXN3-222ENST00000553570 A0A0G2JQZ4 141 aa2.66□□□□□ -1.98
ATXN3-222ENST00000553570 TAX1BP3O14907 124 aa2.66□□□□□ -1.98
ATXN3-222ENST00000553570 SPINK1P00995 79 aa2.66□□□□□ -1.98
ATXN3-222ENST00000553570 SCGB1C2P0DMR2 95 aa2.66□□□□□ -1.98
ATXN3-222ENST00000553570 LCE3AQ5TA76 89 aa2.66□□□□□ -1.98
ATXN3-222ENST00000553570 LINC00575Q6W349 94 aa2.66□□□□□ -1.98
ATXN3-222ENST00000553570 GTF2H5Q6ZYL4 71 aa2.66□□□□□ -1.98
ATXN3-222ENST00000553570 A0A0B4J2C4 111 aa2.65□□□□□ -1.99
ATXN3-222ENST00000553570 H0YGX0 51 aa2.65□□□□□ -1.99
ATXN3-222ENST00000553570 H3BUT2 72 aa2.65□□□□□ -1.99
ATXN3-222ENST00000553570 FABP2P12104 132 aa2.65□□□□□ -1.99
ATXN3-222ENST00000553570 Q6ZQY7 126 aa2.65□□□□□ -1.99
ATXN3-222ENST00000553570 FAT3Q8TDW7 4589 aa2.65□□□□□ -1.99
ATXN3-222ENST00000553570 A0A1B0GV72 72 aa2.64□□□□□ -1.99
ATXN3-222ENST00000553570 A0A1W2PPM0 123 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms