RNA–Protein interactions for RNA: ENST00000550662.1

NPAS3-208, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-208ENST00000550662 SPTBN5Q9NRC6 3674 aaKnown RBP-0.59□□□□□ -2.5
NPAS3-208ENST00000550662 BOD1L1Q8NFC6 3051 aa-0.6□□□□□ -2.51
NPAS3-208ENST00000550662 CEP295Q9C0D2 2601 aa-0.6□□□□□ -2.51
NPAS3-208ENST00000550662 PKD1L2Q7Z442 2459 aa-0.6□□□□□ -2.51
NPAS3-208ENST00000550662 UBR3Q6ZT12 1888 aa-0.6□□□□□ -2.51
NPAS3-208ENST00000550662 IGLC2P0DOY2 106 aa-0.6□□□□□ -2.51
NPAS3-208ENST00000550662 IGLC3P0DOY3 106 aa-0.6□□□□□ -2.51
NPAS3-208ENST00000550662 EPRSP07814 1512 aaKnown RBP-0.6□□□□□ -2.51
NPAS3-208ENST00000550662 LRBAP50851 2863 aa-0.6□□□□□ -2.51
NPAS3-208ENST00000550662 SUPT6HQ7KZ85 1726 aaKnown RBP-0.61□□□□□ -2.51
NPAS3-208ENST00000550662 TIAM2Q8IVF5 1701 aa-0.61□□□□□ -2.51
NPAS3-208ENST00000550662 ADGRG4Q8IZF6 3080 aa-0.61□□□□□ -2.51
NPAS3-208ENST00000550662 F8WEM9 126 aa-0.61□□□□□ -2.51
NPAS3-208ENST00000550662 SCN11AQ9UI33 1791 aa-0.61□□□□□ -2.51
NPAS3-208ENST00000550662 MGAQ8IWI9 3026 aa-0.61□□□□□ -2.51
NPAS3-208ENST00000550662 POLR1AO95602 1720 aaPredicted RBP-0.61□□□□□ -2.51
NPAS3-208ENST00000550662 FANCAO15360 1455 aa-0.61□□□□□ -2.51
NPAS3-208ENST00000550662 RGPD8O14715 1765 aaPredicted RBP-0.62□□□□□ -2.51
NPAS3-208ENST00000550662 RGPD5Q99666 1765 aa-0.62□□□□□ -2.51
NPAS3-208ENST00000550662 MYO3AQ8NEV4 1616 aa-0.62□□□□□ -2.51
NPAS3-208ENST00000550662 C9orf92A6NGG3 77 aa-0.62□□□□□ -2.51
NPAS3-208ENST00000550662 D6R8Y8 96 aa-0.62□□□□□ -2.51
NPAS3-208ENST00000550662 LEPROTL1O95214 131 aa-0.62□□□□□ -2.51
NPAS3-208ENST00000550662 COX7BP24311 80 aa-0.62□□□□□ -2.51
NPAS3-208ENST00000550662 RPL38P63173 70 aaKnown RBP-0.62□□□□□ -2.51
NPAS3-208ENST00000550662 MUSTN1Q8IVN3 82 aa-0.62□□□□□ -2.51
NPAS3-208ENST00000550662 UBE2D4Q9Y2X8 147 aa-0.62□□□□□ -2.51
NPAS3-208ENST00000550662 RANBP2P49792 3224 aaKnown RBP-0.62□□□□□ -2.51
NPAS3-208ENST00000550662 LRRC9Q6ZRR7 1453 aa-0.62□□□□□ -2.51
NPAS3-208ENST00000550662 ACACBO00763 2458 aa-0.62□□□□□ -2.51
NPAS3-208ENST00000550662 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.62□□□□□ -2.51
NPAS3-208ENST00000550662 AKAP12Q02952 1782 aa-0.62□□□□□ -2.51
NPAS3-208ENST00000550662 LRRC7Q96NW7 1537 aa-0.63□□□□□ -2.51
NPAS3-208ENST00000550662 CSMD1Q96PZ7 3565 aa-0.63□□□□□ -2.51
NPAS3-208ENST00000550662 H3BNG1 76 aa-0.63□□□□□ -2.51
NPAS3-208ENST00000550662 PRUNE2Q8WUY3 3088 aa-0.63□□□□□ -2.51
NPAS3-208ENST00000550662 ZNF831Q5JPB2 1677 aa-0.63□□□□□ -2.51
NPAS3-208ENST00000550662 TMEM131LA2VDJ0 1609 aa-0.64□□□□□ -2.51
NPAS3-208ENST00000550662 FREM2Q5SZK8 3169 aa-0.64□□□□□ -2.51
NPAS3-208ENST00000550662 RGPD3A6NKT7 1758 aaPredicted RBP-0.64□□□□□ -2.51
NPAS3-208ENST00000550662 RGPD4Q7Z3J3 1758 aa-0.64□□□□□ -2.51
NPAS3-208ENST00000550662 ATP7BP35670 1465 aa-0.64□□□□□ -2.51
NPAS3-208ENST00000550662 NDUFA3O95167 84 aa-0.64□□□□□ -2.51
NPAS3-208ENST00000550662 LOC400499M0QZD8 3231 aa-0.64□□□□□ -2.51
NPAS3-208ENST00000550662 DOT1LQ8TEK3 1739 aa-0.64□□□□□ -2.51
NPAS3-208ENST00000550662 USP32Q8NFA0 1604 aa-0.64□□□□□ -2.51
NPAS3-208ENST00000550662 DCHS1Q96JQ0 3298 aa-0.65□□□□□ -2.51
NPAS3-208ENST00000550662 LTN1O94822 1766 aa-0.65□□□□□ -2.51
NPAS3-208ENST00000550662 PLXNC1O60486 1568 aa-0.65□□□□□ -2.51
NPAS3-208ENST00000550662 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.65□□□□□ -2.51
NPAS3-208ENST00000550662 ATP10BO94823 1461 aa-0.65□□□□□ -2.51
NPAS3-208ENST00000550662 ABCC10Q5T3U5 1492 aa-0.65□□□□□ -2.51
NPAS3-208ENST00000550662 FRYQ5TBA9 3013 aa-0.65□□□□□ -2.51
NPAS3-208ENST00000550662 S100A8P05109 93 aa-0.65□□□□□ -2.51
NPAS3-208ENST00000550662 NESP48681 1621 aa-0.65□□□□□ -2.51
NPAS3-208ENST00000550662 ANKRD50Q9ULJ7 1429 aa-0.65□□□□□ -2.51
NPAS3-208ENST00000550662 WIZO95785 1651 aa-0.65□□□□□ -2.51
NPAS3-208ENST00000550662 A0A1B0GUT8 65 aa-0.66□□□□□ -2.52
NPAS3-208ENST00000550662 NEXMIFQ5QGS0 1516 aa-0.66□□□□□ -2.52
NPAS3-208ENST00000550662 CEP162Q5TB80 1403 aa-0.66□□□□□ -2.52
NPAS3-208ENST00000550662 EP400Q96L91 3159 aa-0.66□□□□□ -2.52
NPAS3-208ENST00000550662 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.66□□□□□ -2.52
NPAS3-208ENST00000550662 CENPEQ02224 2701 aa-0.66□□□□□ -2.52
NPAS3-208ENST00000550662 MYO9AB2RTY4 2548 aa-0.67□□□□□ -2.52
NPAS3-208ENST00000550662 HMGN2P05204 90 aaKnown RBP-0.67□□□□□ -2.52
NPAS3-208ENST00000550662 MT1BP07438 61 aa-0.67□□□□□ -2.52
NPAS3-208ENST00000550662 PLGLAQ15195 96 aa-0.67□□□□□ -2.52
NPAS3-208ENST00000550662 UNC80Q8N2C7 3258 aa-0.67□□□□□ -2.52
NPAS3-208ENST00000550662 ATMQ13315 3056 aa-0.68□□□□□ -2.52
NPAS3-208ENST00000550662 CRYBG3Q68DQ2 2970 aa-0.68□□□□□ -2.52
NPAS3-208ENST00000550662 SPEGQ15772 3267 aa-0.68□□□□□ -2.52
NPAS3-208ENST00000550662 CYB5AP00167 134 aa-0.68□□□□□ -2.52
NPAS3-208ENST00000550662 C3orf79P0CE67 100 aa-0.68□□□□□ -2.52
NPAS3-208ENST00000550662 MT1HL1P0DM35 61 aa-0.68□□□□□ -2.52
NPAS3-208ENST00000550662 SMIM11AP58511 58 aa-0.68□□□□□ -2.52
NPAS3-208ENST00000550662 NWD1Q149M9 1564 aa-0.68□□□□□ -2.52
NPAS3-208ENST00000550662 GAFA1Q96PS6 74 aa-0.68□□□□□ -2.52
NPAS3-208ENST00000550662 C20orf78Q9BR46 151 aa-0.68□□□□□ -2.52
NPAS3-208ENST00000550662 DNAH10Q8IVF4 4471 aa-0.68□□□□□ -2.52
NPAS3-208ENST00000550662 TLN2Q9Y4G6 2542 aa-0.68□□□□□ -2.52
NPAS3-208ENST00000550662 C5orf42Q9H799 3197 aa-0.68□□□□□ -2.52
NPAS3-208ENST00000550662 MAP3K1Q13233 1512 aa-0.69□□□□□ -2.52
NPAS3-208ENST00000550662 IQCF6A8MYZ5 107 aa-0.69□□□□□ -2.52
NPAS3-208ENST00000550662 SNHG12Q9BXW3 62 aa-0.69□□□□□ -2.52
NPAS3-208ENST00000550662 PRO3102Q9H379 93 aa-0.69□□□□□ -2.52
NPAS3-208ENST00000550662 TLN1Q9Y490 2541 aaKnown RBP-0.69□□□□□ -2.52
NPAS3-208ENST00000550662 DMDP11532 3685 aa-0.69□□□□□ -2.52
NPAS3-208ENST00000550662 GYPAP02724 150 aa-0.7□□□□□ -2.52
NPAS3-208ENST00000550662 PEA15Q15121 130 aa-0.7□□□□□ -2.52
NPAS3-208ENST00000550662 VCANP13611 3396 aa-0.7□□□□□ -2.52
NPAS3-208ENST00000550662 TRAV21A0A0B4J279 112 aa-0.71□□□□□ -2.52
NPAS3-208ENST00000550662 H0YAA0 97 aa-0.71□□□□□ -2.52
NPAS3-208ENST00000550662 PRLHP81277 87 aa-0.71□□□□□ -2.52
NPAS3-208ENST00000550662 ARFGEF2Q9Y6D5 1785 aa-0.71□□□□□ -2.52
NPAS3-208ENST00000550662 DIP2BQ9P265 1576 aa-0.71□□□□□ -2.52
NPAS3-208ENST00000550662 DEPDC5O75140 1603 aa-0.71□□□□□ -2.52
NPAS3-208ENST00000550662 CFAP54Q96N23 3096 aa-0.72□□□□□ -2.52
NPAS3-208ENST00000550662 PPLO60437 1756 aa-0.72□□□□□ -2.52
NPAS3-208ENST00000550662 MAGI3Q5TCQ9 1506 aa-0.72□□□□□ -2.52
NPAS3-208ENST00000550662 LCE6AA0A183 80 aa-0.72□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms