RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 FAM229AH3BQW9 127 aa10.34□□□□□ -0.75
RBFOX1-212ENST00000550418 C8orf17Q9NRJ1 99 aa10.34□□□□□ -0.75
RBFOX1-212ENST00000550418 IGLV5-48A0A075B6I7 105 aa10.32□□□□□ -0.76
RBFOX1-212ENST00000550418 FP248Q71RG6 208 aaPredicted RBP10.31□□□□□ -0.76
RBFOX1-212ENST00000550418 KRTAP1-3Q8IUG1 177 aa10.3□□□□□ -0.76
RBFOX1-212ENST00000550418 MIR22HGQ0VDD5 57 aa10.29□□□□□ -0.76
RBFOX1-212ENST00000550418 MDFIQ99750 246 aa10.29□□□□□ -0.76
RBFOX1-212ENST00000550418 CDC42SE1Q9NRR8 79 aa10.29□□□□□ -0.76
RBFOX1-212ENST00000550418 WDFY3Q8IZQ1 3526 aa10.29□□□□□ -0.76
RBFOX1-212ENST00000550418 PLA2G2DQ9UNK4 145 aa10.29□□□□□ -0.76
RBFOX1-212ENST00000550418 NBEAL2Q6ZNJ1 2754 aa10.28□□□□□ -0.76
RBFOX1-212ENST00000550418 TLX1NBP0CAT3 122 aa10.27□□□□□ -0.77
RBFOX1-212ENST00000550418 A0A1B0GVX0 72 aa10.26□□□□□ -0.77
RBFOX1-212ENST00000550418 ITPR2Q14571 2701 aa10.24□□□□□ -0.77
RBFOX1-212ENST00000550418 CR1P17927 2039 aa10.22□□□□□ -0.77
RBFOX1-212ENST00000550418 FAM229BQ4G0N7 80 aa10.22□□□□□ -0.77
RBFOX1-212ENST00000550418 KRTAP10-3P60369 221 aa10.21□□□□□ -0.77
RBFOX1-212ENST00000550418 DSCR10P59022 87 aa10.21□□□□□ -0.77
RBFOX1-212ENST00000550418 ZANQ9Y493 2812 aa10.21□□□□□ -0.78
RBFOX1-212ENST00000550418 OXTP01178 125 aa10.21□□□□□ -0.78
RBFOX1-212ENST00000550418 SPINT4Q6UDR6 99 aa10.21□□□□□ -0.78
RBFOX1-212ENST00000550418 NBDYA0A0U1RRE5 68 aa10.2□□□□□ -0.78
RBFOX1-212ENST00000550418 NBEAL1Q6ZS30 2694 aa10.2□□□□□ -0.78
RBFOX1-212ENST00000550418 KRTAP1-1Q07627 177 aa10.2□□□□□ -0.78
RBFOX1-212ENST00000550418 SSBP3-AS1Q7Z2R9 100 aa10.18□□□□□ -0.78
RBFOX1-212ENST00000550418 RTL8CO15255 209 aa10.18□□□□□ -0.78
RBFOX1-212ENST00000550418 SPRR4Q96PI1 79 aa10.17□□□□□ -0.78
RBFOX1-212ENST00000550418 UTP20O75691 2785 aaKnown RBP10.17□□□□□ -0.78
RBFOX1-212ENST00000550418 ASPMQ8IZT6 3477 aa10.17□□□□□ -0.78
RBFOX1-212ENST00000550418 DCHS1Q96JQ0 3298 aa10.16□□□□□ -0.78
RBFOX1-212ENST00000550418 RBM12B-AS1Q9P1G2 102 aa10.15□□□□□ -0.78
RBFOX1-212ENST00000550418 Q96NJ1 140 aa10.15□□□□□ -0.78
RBFOX1-212ENST00000550418 K7EIL1 84 aa10.14□□□□□ -0.79
RBFOX1-212ENST00000550418 ASH1LQ9NR48 2969 aaKnown RBP10.13□□□□□ -0.79
RBFOX1-212ENST00000550418 LAMA5O15230 3695 aa10.13□□□□□ -0.79
RBFOX1-212ENST00000550418 DMDP11532 3685 aa10.12□□□□□ -0.79
RBFOX1-212ENST00000550418 PRR26Q8N8Z3 221 aa10.12□□□□□ -0.79
RBFOX1-212ENST00000550418 Q75L30 129 aa10.11□□□□□ -0.79
RBFOX1-212ENST00000550418 Q8N9P0 234 aaPredicted RBP10.11□□□□□ -0.79
RBFOX1-212ENST00000550418 IGLV5-37A0A075B6J1 123 aa10.1□□□□□ -0.79
RBFOX1-212ENST00000550418 IGLV7-46A0A075B6I9 117 aa10.1□□□□□ -0.79
RBFOX1-212ENST00000550418 TYMSOSQ8TAI1 123 aa10.1□□□□□ -0.79
RBFOX1-212ENST00000550418 RELNP78509 3460 aa10.1□□□□□ -0.79
RBFOX1-212ENST00000550418 Q8NDZ9 215 aa10.09□□□□□ -0.79
RBFOX1-212ENST00000550418 CRYBG3Q68DQ2 2970 aa10.09□□□□□ -0.79
RBFOX1-212ENST00000550418 CASC10Q5T4H9 136 aa10.07□□□□□ -0.8
RBFOX1-212ENST00000550418 ZNF861PO60384 105 aa10.07□□□□□ -0.8
RBFOX1-212ENST00000550418 C9orf163Q8N9P6 203 aa10.07□□□□□ -0.8
RBFOX1-212ENST00000550418 KRTAP10-11P60412 298 aa10.06□□□□□ -0.8
RBFOX1-212ENST00000550418 NSD1Q96L73 2696 aaPredicted RBP10.03□□□□□ -0.8
RBFOX1-212ENST00000550418 Q5VV11 94 aa10.02□□□□□ -0.81
RBFOX1-212ENST00000550418 ANAPC11Q9NYG5 84 aa10.02□□□□□ -0.81
RBFOX1-212ENST00000550418 LINC01558Q9Y6Z2 57 aa10.01□□□□□ -0.81
RBFOX1-212ENST00000550418 APCP25054 2843 aa10□□□□□ -0.81
RBFOX1-212ENST00000550418 CNBPP62633 177 aaKnown RBP9.99□□□□□ -0.81
RBFOX1-212ENST00000550418 NF1P21359 2839 aa9.98□□□□□ -0.81
RBFOX1-212ENST00000550418 CELSR2Q9HCU4 2923 aa9.98□□□□□ -0.81
RBFOX1-212ENST00000550418 HRNRQ86YZ3 2850 aaPredicted RBP9.98□□□□□ -0.81
RBFOX1-212ENST00000550418 CRIPTQ9P021 101 aa9.97□□□□□ -0.81
RBFOX1-212ENST00000550418 PLA2G1BP04054 148 aaKnown RBP9.96□□□□□ -0.81
RBFOX1-212ENST00000550418 LINC01554Q52M75 96 aa9.95□□□□□ -0.82
RBFOX1-212ENST00000550418 ZFHX4Q86UP3 3567 aa9.95□□□□□ -0.82
RBFOX1-212ENST00000550418 DCHS2Q6V1P9 2916 aa9.94□□□□□ -0.82
RBFOX1-212ENST00000550418 J3QL48 77 aa9.94□□□□□ -0.82
RBFOX1-212ENST00000550418 PSORS1C2Q9UIG4 136 aa9.93□□□□□ -0.82
RBFOX1-212ENST00000550418 HIVEP1P15822 2718 aa9.91□□□□□ -0.82
RBFOX1-212ENST00000550418 MMP24-AS1A0A0U1RRL7 71 aa9.91□□□□□ -0.82
RBFOX1-212ENST00000550418 SPRR1AP35321 89 aa9.91□□□□□ -0.82
RBFOX1-212ENST00000550418 APLNQ9ULZ1 77 aa9.91□□□□□ -0.82
RBFOX1-212ENST00000550418 FBN2P35556 2912 aa9.91□□□□□ -0.82
RBFOX1-212ENST00000550418 PRAC1Q96KF2 57 aa9.9□□□□□ -0.82
RBFOX1-212ENST00000550418 Q8N1X5 172 aa9.88□□□□□ -0.83
RBFOX1-212ENST00000550418 A0A087WTM6 91 aa9.88□□□□□ -0.83
RBFOX1-212ENST00000550418 HRES1P13985 223 aa9.87□□□□□ -0.83
RBFOX1-212ENST00000550418 IGLV7-43P04211 117 aa9.87□□□□□ -0.83
RBFOX1-212ENST00000550418 SPINK7P58062 85 aa9.84□□□□□ -0.83
RBFOX1-212ENST00000550418 H3BS24 57 aa9.82□□□□□ -0.84
RBFOX1-212ENST00000550418 LINC00472Q9H8W2 130 aa9.82□□□□□ -0.84
RBFOX1-212ENST00000550418 LINC00304Q8N9R0 145 aa9.81□□□□□ -0.84
RBFOX1-212ENST00000550418 NIPBLQ6KC79 2804 aaeCLIP9.8□□□□□ -0.84
RBFOX1-212ENST00000550418 C9orf92A6NGG3 77 aa9.78□□□□□ -0.84
RBFOX1-212ENST00000550418 A0A0D9SG42 100 aa9.75□□□□□ -0.85
RBFOX1-212ENST00000550418 SPRR1BP22528 89 aa9.74□□□□□ -0.85
RBFOX1-212ENST00000550418 TNP2Q05952 138 aa9.74□□□□□ -0.85
RBFOX1-212ENST00000550418 A0A1B0GU33 70 aa9.74□□□□□ -0.85
RBFOX1-212ENST00000550418 CSAG1Q6PB30 78 aa9.72□□□□□ -0.85
RBFOX1-212ENST00000550418 ZCCHC13Q8WW36 166 aaKnown RBP9.72□□□□□ -0.85
RBFOX1-212ENST00000550418 MXRA5Q9NR99 2828 aa9.71□□□□□ -0.85
RBFOX1-212ENST00000550418 KMT2BQ9UMN6 2715 aaPredicted RBP9.7□□□□□ -0.86
RBFOX1-212ENST00000550418 KRTAP26-1Q6PEX3 210 aa9.67□□□□□ -0.86
RBFOX1-212ENST00000550418 STAB2Q8WWQ8 2551 aa9.67□□□□□ -0.86
RBFOX1-212ENST00000550418 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.67□□□□□ -0.86
RBFOX1-212ENST00000550418 SMR3BP02814 79 aaPredicted RBP9.66□□□□□ -0.86
RBFOX1-212ENST00000550418 Q5W150 140 aa9.64□□□□□ -0.87
RBFOX1-212ENST00000550418 KRTAP29-1A8MX34 341 aaPredicted RBP9.63□□□□□ -0.87
RBFOX1-212ENST00000550418 SMG1Q96Q15 3661 aaKnown RBP9.61□□□□□ -0.87
RBFOX1-212ENST00000550418 KRTAP4-16G5E9R7 235 aaPredicted RBP9.6□□□□□ -0.87
RBFOX1-212ENST00000550418 TENM4Q6N022 2769 aa9.57□□□□□ -0.88
RBFOX1-212ENST00000550418 Q6ZR54 194 aa9.56□□□□□ -0.88
RBFOX1-212ENST00000550418 DMAC1Q96GE9 116 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms