RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 KRTAP4-9Q9BYQ8 210 aa5.1□□□□□ -1.59
TRAFD1-207ENST00000550051 A4D1N5 150 aa5.09□□□□□ -1.59
TRAFD1-207ENST00000550051 Q6Q795 121 aa5.09□□□□□ -1.59
TRAFD1-207ENST00000550051 ATP11AUNQ6ZP68 121 aa5.09□□□□□ -1.59
TRAFD1-207ENST00000550051 Q75L30 129 aa5.09□□□□□ -1.59
TRAFD1-207ENST00000550051 ZNF815PA8K554 130 aa5.08□□□□□ -1.6
TRAFD1-207ENST00000550051 SYS1-DBNDD2H3BUS1 97 aa5.08□□□□□ -1.6
TRAFD1-207ENST00000550051 KRTAP15-1Q3LI76 137 aa5.08□□□□□ -1.6
TRAFD1-207ENST00000550051 C20orf202A1L168 122 aa5.06□□□□□ -1.6
TRAFD1-207ENST00000550051 COPS9Q8WXC6 57 aa5.06□□□□□ -1.6
TRAFD1-207ENST00000550051 KRTAP4-2Q9BYR5 136 aa5.06□□□□□ -1.6
TRAFD1-207ENST00000550051 NHP2Q9NX24 153 aaKnown RBP5.06□□□□□ -1.6
TRAFD1-207ENST00000550051 A6NDN8 102 aa5.05□□□□□ -1.6
TRAFD1-207ENST00000550051 IFITM1P13164 125 aa5.05□□□□□ -1.6
TRAFD1-207ENST00000550051 LINC01545Q5VT33 79 aa5.05□□□□□ -1.6
TRAFD1-207ENST00000550051 PCP2Q8IVA1 136 aa5.05□□□□□ -1.6
TRAFD1-207ENST00000550051 OBSCN-AS1Q96MR7 158 aa5.05□□□□□ -1.6
TRAFD1-207ENST00000550051 TTTY13Q9BZ97 58 aa5.05□□□□□ -1.6
TRAFD1-207ENST00000550051 Q6JHZ5 121 aa5.04□□□□□ -1.6
TRAFD1-207ENST00000550051 Q6ZVH6 145 aa5.04□□□□□ -1.6
TRAFD1-207ENST00000550051 TRBV7-7A0A0K0K1E9 115 aa5.03□□□□□ -1.6
TRAFD1-207ENST00000550051 PET117Q6UWS5 81 aa5.03□□□□□ -1.6
TRAFD1-207ENST00000550051 USH2AO75445 5202 aa5.03□□□□□ -1.6
TRAFD1-207ENST00000550051 SSPOA2VEC9 5147 aa5.02□□□□□ -1.61
TRAFD1-207ENST00000550051 COLCA2A8K830 154 aa5.02□□□□□ -1.61
TRAFD1-207ENST00000550051 F8WEM9 126 aa5.02□□□□□ -1.61
TRAFD1-207ENST00000550051 SMIM11BQ8TCY0 68 aa5.02□□□□□ -1.61
TRAFD1-207ENST00000550051 TRAV13-2A0A0B4J235 113 aa5.01□□□□□ -1.61
TRAFD1-207ENST00000550051 OCIAD2Q56VL3 154 aa5.01□□□□□ -1.61
TRAFD1-207ENST00000550051 SCGB1D4Q6XE38 83 aa5.01□□□□□ -1.61
TRAFD1-207ENST00000550051 MUSTN1Q8IVN3 82 aa5.01□□□□□ -1.61
TRAFD1-207ENST00000550051 CLEC2BQ92478 149 aa5.01□□□□□ -1.61
TRAFD1-207ENST00000550051 FCGBPQ9Y6R7 5405 aaPredicted RBP5.01□□□□□ -1.61
TRAFD1-207ENST00000550051 IGFL1Q6UW32 110 aa5□□□□□ -1.61
TRAFD1-207ENST00000550051 LINC00575Q6W349 94 aa5□□□□□ -1.61
TRAFD1-207ENST00000550051 Q96NJ1 140 aa5□□□□□ -1.61
TRAFD1-207ENST00000550051 C20orf166-AS1Q96NR2 134 aa5□□□□□ -1.61
TRAFD1-207ENST00000550051 TRBV20-1A0A075B6N2 111 aa4.99□□□□□ -1.61
TRAFD1-207ENST00000550051 MT2AP02795 61 aa4.99□□□□□ -1.61
TRAFD1-207ENST00000550051 VAMP3Q15836 100 aa4.99□□□□□ -1.61
TRAFD1-207ENST00000550051 A8MUU9 505 aa4.98□□□□□ -1.61
TRAFD1-207ENST00000550051 PCP4P48539 62 aa4.98□□□□□ -1.61
TRAFD1-207ENST00000550051 hADV29S1A0JD25 119 aa4.97□□□□□ -1.61
TRAFD1-207ENST00000550051 LST1O00453 97 aa4.97□□□□□ -1.61
TRAFD1-207ENST00000550051 C3orf79P0CE67 100 aa4.97□□□□□ -1.61
TRAFD1-207ENST00000550051 Q6ZQY7 126 aa4.97□□□□□ -1.61
TRAFD1-207ENST00000550051 SLC7A5P1Q8MH63 180 aa4.97□□□□□ -1.61
TRAFD1-207ENST00000550051 HIST1H2BKO60814 126 aa4.96□□□□□ -1.62
TRAFD1-207ENST00000550051 HIST1H2BJP06899 126 aa4.96□□□□□ -1.62
TRAFD1-207ENST00000550051 HIST1H2BOP23527 126 aa4.96□□□□□ -1.62
TRAFD1-207ENST00000550051 HIST1H2BBP33778 126 aa4.96□□□□□ -1.62
TRAFD1-207ENST00000550051 HIST1H2BDP58876 126 aa4.96□□□□□ -1.62
TRAFD1-207ENST00000550051 HIST1H2BCP62807 126 aa4.96□□□□□ -1.62
TRAFD1-207ENST00000550051 HIST2H2BEQ16778 126 aa4.96□□□□□ -1.62
TRAFD1-207ENST00000550051 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.96□□□□□ -1.62
TRAFD1-207ENST00000550051 HIST1H2BHQ93079 126 aa4.96□□□□□ -1.62
TRAFD1-207ENST00000550051 HIST1H2BNQ99877 126 aa4.96□□□□□ -1.62
TRAFD1-207ENST00000550051 HIST1H2BMQ99879 126 aa4.96□□□□□ -1.62
TRAFD1-207ENST00000550051 PPDPFLQ8WWR9 84 aa4.95□□□□□ -1.62
TRAFD1-207ENST00000550051 MT1FP04733 61 aa4.94□□□□□ -1.62
TRAFD1-207ENST00000550051 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.94□□□□□ -1.62
TRAFD1-207ENST00000550051 SCGB1D1O95968 90 aa4.93□□□□□ -1.62
TRAFD1-207ENST00000550051 KRTAP4-11Q9BYQ6 195 aa4.93□□□□□ -1.62
TRAFD1-207ENST00000550051 MACF1Q9UPN3 7388 aaKnown RBP4.92□□□□□ -1.62
TRAFD1-207ENST00000550051 KRTDAPP60985 99 aa4.92□□□□□ -1.62
TRAFD1-207ENST00000550051 SNHG12Q9BXW3 62 aa4.92□□□□□ -1.62
TRAFD1-207ENST00000550051 SS18L2Q9UHA2 77 aa4.92□□□□□ -1.62
TRAFD1-207ENST00000550051 KRTAP10-10P60014 251 aa4.91□□□□□ -1.62
TRAFD1-207ENST00000550051 COA6Q5JTJ3 125 aaKnown RBP4.91□□□□□ -1.62
TRAFD1-207ENST00000550051 KRTAP16-1A8MUX0 517 aa4.9□□□□□ -1.63
TRAFD1-207ENST00000550051 TEN1Q86WV5 123 aa4.9□□□□□ -1.63
TRAFD1-207ENST00000550051 MPLKIPQ8TAP9 179 aa4.9□□□□□ -1.63
TRAFD1-207ENST00000550051 SYNE2Q8WXH0 6885 aaKnown RBP4.9□□□□□ -1.63
TRAFD1-207ENST00000550051 H3BUT2 72 aa4.89□□□□□ -1.63
TRAFD1-207ENST00000550051 SNRPEP62304 92 aaKnown RBP4.89□□□□□ -1.63
TRAFD1-207ENST00000550051 LINC00846Q9NV44 126 aa4.89□□□□□ -1.63
TRAFD1-207ENST00000550051 A0A0A0MQY5 61 aa4.88□□□□□ -1.63
TRAFD1-207ENST00000550051 FAM236DA0A1B0GTK5 79 aa4.88□□□□□ -1.63
TRAFD1-207ENST00000550051 FAM236CP0DP71 79 aa4.88□□□□□ -1.63
TRAFD1-207ENST00000550051 BVES-AS1Q5T3Y7 98 aa4.88□□□□□ -1.63
TRAFD1-207ENST00000550051 ATOH7Q8N100 152 aa4.88□□□□□ -1.63
TRAFD1-207ENST00000550051 RBM12B-AS1Q9P1G2 102 aa4.87□□□□□ -1.63
TRAFD1-207ENST00000550051 HRES1P13985 223 aa4.86□□□□□ -1.63
TRAFD1-207ENST00000550051 DSCR10P59022 87 aa4.86□□□□□ -1.63
TRAFD1-207ENST00000550051 KRTAP19-6Q3LI70 58 aa4.86□□□□□ -1.63
TRAFD1-207ENST00000550051 LINC00313P59037 77 aa4.85□□□□□ -1.63
TRAFD1-207ENST00000550051 NOTCH2NLQ7Z3S9 236 aa4.85□□□□□ -1.63
TRAFD1-207ENST00000550051 A0A087WSZ3 146 aa4.84□□□□□ -1.63
TRAFD1-207ENST00000550051 NDUFV3P56181 108 aaKnown RBP4.84□□□□□ -1.63
TRAFD1-207ENST00000550051 C12orf57Q99622 126 aa4.84□□□□□ -1.63
TRAFD1-207ENST00000550051 SNCGO76070 127 aa4.82□□□□□ -1.64
TRAFD1-207ENST00000550051 H0YGX0 51 aa4.8□□□□□ -1.64
TRAFD1-207ENST00000550051 H3BMG7 143 aa4.8□□□□□ -1.64
TRAFD1-207ENST00000550051 KRTAP6-3Q3LI67 103 aa4.79□□□□□ -1.64
TRAFD1-207ENST00000550051 MTURNQ8N3F0 131 aa4.79□□□□□ -1.64
TRAFD1-207ENST00000550051 A0A1W2PNM2 257 aa4.78□□□□□ -1.64
TRAFD1-207ENST00000550051 IGKV4-1P06312 121 aa4.78□□□□□ -1.64
TRAFD1-207ENST00000550051 S100A1P23297 94 aa4.78□□□□□ -1.64
TRAFD1-207ENST00000550051 HIST1H4GQ99525 98 aa4.78□□□□□ -1.64
TRAFD1-207ENST00000550051 SIGMAR1Q99720 223 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms