RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 LYNX1G3V0Z9 82 aa-0.2□□□□□ -2.44
SNRPF-202ENST00000549580 SPRR2AP35326 72 aa-0.2□□□□□ -2.44
SNRPF-202ENST00000549580 THOC2Q8NI27 1593 aaKnown RBP-0.2□□□□□ -2.44
SNRPF-202ENST00000549580 KCNQ1DNQ9H478 68 aa-0.21□□□□□ -2.44
SNRPF-202ENST00000549580 TJP1Q07157 1748 aa-0.21□□□□□ -2.44
SNRPF-202ENST00000549580 KRTAP6-1Q3LI64 71 aa-0.22□□□□□ -2.44
SNRPF-202ENST00000549580 REV3LO60673 3130 aa-0.22□□□□□ -2.44
SNRPF-202ENST00000549580 COL6A3P12111 3177 aa-0.22□□□□□ -2.44
SNRPF-202ENST00000549580 MYO5CQ9NQX4 1742 aa-0.22□□□□□ -2.44
SNRPF-202ENST00000549580 TENM2Q9NT68 2774 aa-0.23□□□□□ -2.45
SNRPF-202ENST00000549580 ENHOQ6UWT2 76 aa-0.23□□□□□ -2.45
SNRPF-202ENST00000549580 SMCO4Q9NRQ5 59 aa-0.23□□□□□ -2.45
SNRPF-202ENST00000549580 LRRIQ1Q96JM4 1722 aa-0.24□□□□□ -2.45
SNRPF-202ENST00000549580 IAPPP10997 89 aa-0.24□□□□□ -2.45
SNRPF-202ENST00000549580 KRTAP6-2Q3LI66 62 aa-0.24□□□□□ -2.45
SNRPF-202ENST00000549580 NBASA2RRP1 2371 aa-0.24□□□□□ -2.45
SNRPF-202ENST00000549580 DEFB130BP0DP73 79 aa-0.25□□□□□ -2.45
SNRPF-202ENST00000549580 DEFB130AP0DP74 79 aa-0.25□□□□□ -2.45
SNRPF-202ENST00000549580 UGGT2Q9NYU1 1516 aa-0.25□□□□□ -2.45
SNRPF-202ENST00000549580 IQGAP3Q86VI3 1631 aa-0.26□□□□□ -2.45
SNRPF-202ENST00000549580 PDCD5O14737 125 aa-0.26□□□□□ -2.45
SNRPF-202ENST00000549580 ATXN8Q156A1 80 aa-0.26□□□□□ -2.45
SNRPF-202ENST00000549580 TRANK1O15050 2925 aa-0.27□□□□□ -2.45
SNRPF-202ENST00000549580 PARP4Q9UKK3 1724 aaKnown RBP-0.27□□□□□ -2.45
SNRPF-202ENST00000549580 RNF17Q9BXT8 1623 aaKnown RBP-0.27□□□□□ -2.45
SNRPF-202ENST00000549580 ZC3H13Q5T200 1668 aaKnown RBP-0.27□□□□□ -2.45
SNRPF-202ENST00000549580 DUOX2Q9NRD8 1548 aa-0.28□□□□□ -2.45
SNRPF-202ENST00000549580 CRIP1P50238 77 aa-0.28□□□□□ -2.45
SNRPF-202ENST00000549580 DIP2AQ14689 1571 aa-0.28□□□□□ -2.45
SNRPF-202ENST00000549580 LRP1BQ9NZR2 4599 aa-0.29□□□□□ -2.46
SNRPF-202ENST00000549580 NRAPQ86VF7 1730 aa-0.29□□□□□ -2.46
SNRPF-202ENST00000549580 AKAP13Q12802 2813 aa-0.29□□□□□ -2.46
SNRPF-202ENST00000549580 HILPDAQ9Y5L2 63 aa-0.29□□□□□ -2.46
SNRPF-202ENST00000549580 CDC42BPGQ6DT37 1551 aa-0.29□□□□□ -2.46
SNRPF-202ENST00000549580 SETD2Q9BYW2 2564 aaPredicted RBP-0.29□□□□□ -2.46
SNRPF-202ENST00000549580 SPTBN4Q9H254 2564 aa-0.29□□□□□ -2.46
SNRPF-202ENST00000549580 CREBBPQ92793 2442 aa-0.3□□□□□ -2.46
SNRPF-202ENST00000549580 ETDCA0A1B0GVM5 59 aa-0.3□□□□□ -2.46
SNRPF-202ENST00000549580 PRLHP81277 87 aa-0.3□□□□□ -2.46
SNRPF-202ENST00000549580 HECTD1Q9ULT8 2610 aa-0.31□□□□□ -2.46
SNRPF-202ENST00000549580 SRRM2Q9UQ35 2752 aaKnown RBP-0.31□□□□□ -2.46
SNRPF-202ENST00000549580 KIAA0586Q9BVV6 1533 aa-0.31□□□□□ -2.46
SNRPF-202ENST00000549580 C9orf92A6NGG3 77 aa-0.31□□□□□ -2.46
SNRPF-202ENST00000549580 H3BNG1 76 aa-0.31□□□□□ -2.46
SNRPF-202ENST00000549580 SPRR2EP22531 72 aa-0.31□□□□□ -2.46
SNRPF-202ENST00000549580 GNG13Q9P2W3 67 aa-0.31□□□□□ -2.46
SNRPF-202ENST00000549580 MUC12Q9UKN1 5478 aa-0.31□□□□□ -2.46
SNRPF-202ENST00000549580 KRTAP19-7Q3SYF9 63 aa-0.32□□□□□ -2.46
SNRPF-202ENST00000549580 INO80Q9ULG1 1556 aaPredicted RBP-0.32□□□□□ -2.46
SNRPF-202ENST00000549580 NHSQ6T4R5 1651 aa-0.33□□□□□ -2.46
SNRPF-202ENST00000549580 STAB2Q8WWQ8 2551 aa-0.34□□□□□ -2.46
SNRPF-202ENST00000549580 SVEP1Q4LDE5 3571 aa-0.34□□□□□ -2.46
SNRPF-202ENST00000549580 SONP18583 2426 aaKnown RBP-0.35□□□□□ -2.46
SNRPF-202ENST00000549580 NBEAL1Q6ZS30 2694 aa-0.35□□□□□ -2.47
SNRPF-202ENST00000549580 DEFB114Q30KQ6 69 aa-0.35□□□□□ -2.47
SNRPF-202ENST00000549580 MAP1AP78559 2803 aaPredicted RBP-0.35□□□□□ -2.47
SNRPF-202ENST00000549580 ABCA9Q8IUA7 1624 aa-0.35□□□□□ -2.47
SNRPF-202ENST00000549580 ASXL1Q8IXJ9 1541 aa-0.36□□□□□ -2.47
SNRPF-202ENST00000549580 TNRC18O15417 2968 aaPredicted RBP-0.36□□□□□ -2.47
SNRPF-202ENST00000549580 DEFB106AQ8N104 65 aa-0.37□□□□□ -2.47
SNRPF-202ENST00000549580 PKHD1P08F94 4074 aa-0.37□□□□□ -2.47
SNRPF-202ENST00000549580 MINOS1Q5TGZ0 78 aa-0.38□□□□□ -2.47
SNRPF-202ENST00000549580 S4R3F8 94 aa-0.39□□□□□ -2.47
SNRPF-202ENST00000549580 FLGP20930 4061 aaPredicted RBP-0.39□□□□□ -2.47
SNRPF-202ENST00000549580 SPG11Q96JI7 2443 aa-0.39□□□□□ -2.47
SNRPF-202ENST00000549580 DSPP15924 2871 aaKnown RBP-0.39□□□□□ -2.47
SNRPF-202ENST00000549580 MUC2Q02817 5179 aa-0.4□□□□□ -2.47
SNRPF-202ENST00000549580 PDZD2O15018 2839 aa-0.4□□□□□ -2.47
SNRPF-202ENST00000549580 C3P01024 1663 aa-0.4□□□□□ -2.47
SNRPF-202ENST00000549580 ANKRD36CQ5JPF3 1778 aa-0.41□□□□□ -2.47
SNRPF-202ENST00000549580 ABCC6O95255 1503 aa-0.41□□□□□ -2.48
SNRPF-202ENST00000549580 MT1AP04731 61 aa-0.41□□□□□ -2.48
SNRPF-202ENST00000549580 WT1-ASQ06250 92 aa-0.41□□□□□ -2.48
SNRPF-202ENST00000549580 ITSN2Q9NZM3 1697 aa-0.41□□□□□ -2.48
SNRPF-202ENST00000549580 PRRC2CQ9Y520 2896 aaKnown RBP-0.42□□□□□ -2.48
SNRPF-202ENST00000549580 DNMBPQ6XZF7 1577 aa-0.42□□□□□ -2.48
SNRPF-202ENST00000549580 RPS27P42677 84 aaKnown RBP-0.44□□□□□ -2.48
SNRPF-202ENST00000549580 RPS27LQ71UM5 84 aaKnown RBP-0.44□□□□□ -2.48
SNRPF-202ENST00000549580 LYSTQ99698 3801 aa-0.44□□□□□ -2.48
SNRPF-202ENST00000549580 KIF1AQ12756 1690 aa-0.45□□□□□ -2.48
SNRPF-202ENST00000549580 LINC01549A6NIU2 74 aa-0.45□□□□□ -2.48
SNRPF-202ENST00000549580 SPRR2FQ96RM1 72 aa-0.45□□□□□ -2.48
SNRPF-202ENST00000549580 C6orf48Q9UBA6 75 aa-0.45□□□□□ -2.48
SNRPF-202ENST00000549580 MROH1Q8NDA8 1641 aa-0.46□□□□□ -2.48
SNRPF-202ENST00000549580 NF1P21359 2839 aa-0.46□□□□□ -2.48
SNRPF-202ENST00000549580 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.46□□□□□ -2.48
SNRPF-202ENST00000549580 PKD1P98161 4303 aa-0.47□□□□□ -2.48
SNRPF-202ENST00000549580 EFCAB5A4FU69 1503 aa-0.47□□□□□ -2.48
SNRPF-202ENST00000549580 KRTAP19-8Q3LI54 63 aa-0.47□□□□□ -2.48
SNRPF-202ENST00000549580 CEP290O15078 2479 aa-0.48□□□□□ -2.49
SNRPF-202ENST00000549580 PKD1L2Q7Z442 2459 aa-0.48□□□□□ -2.49
SNRPF-202ENST00000549580 TGP01266 2768 aa-0.48□□□□□ -2.49
SNRPF-202ENST00000549580 NEBP20929 6669 aa-0.49□□□□□ -2.49
SNRPF-202ENST00000549580 TOGARAM1Q9Y4F4 1720 aa-0.49□□□□□ -2.49
SNRPF-202ENST00000549580 MTORP42345 2549 aa-0.49□□□□□ -2.49
SNRPF-202ENST00000549580 K7EMI3 77 aa-0.49□□□□□ -2.49
SNRPF-202ENST00000549580 FCER1GP30273 86 aa-0.49□□□□□ -2.49
SNRPF-202ENST00000549580 NCBP2-AS2Q69YL0 99 aa-0.49□□□□□ -2.49
SNRPF-202ENST00000549580 MADDQ8WXG6 1647 aa-0.49□□□□□ -2.49
SNRPF-202ENST00000549580 EPG5Q9HCE0 2579 aa-0.5□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms