RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 SPRR4Q96PI1 79 aa5.9□□□□□ -1.46
SMARCD1-206ENST00000549274 H3BUT2 72 aa5.89□□□□□ -1.47
SMARCD1-206ENST00000549274 TAX1BP3O14907 124 aa5.89□□□□□ -1.47
SMARCD1-206ENST00000549274 OXTP01178 125 aa5.89□□□□□ -1.47
SMARCD1-206ENST00000549274 CRYGAP11844 174 aa5.89□□□□□ -1.47
SMARCD1-206ENST00000549274 LINC00483Q53H64 154 aa5.89□□□□□ -1.47
SMARCD1-206ENST00000549274 LCE1DQ5T752 114 aa5.89□□□□□ -1.47
SMARCD1-206ENST00000549274 IGLV5-48A0A075B6I7 105 aa5.88□□□□□ -1.47
SMARCD1-206ENST00000549274 A0A1W2PPM0 123 aa5.88□□□□□ -1.47
SMARCD1-206ENST00000549274 LST1O00453 97 aa5.88□□□□□ -1.47
SMARCD1-206ENST00000549274 SPRR1BP22528 89 aa5.88□□□□□ -1.47
SMARCD1-206ENST00000549274 Q6ZQY7 126 aa5.88□□□□□ -1.47
SMARCD1-206ENST00000549274 LAMTOR3Q9UHA4 124 aa5.88□□□□□ -1.47
SMARCD1-206ENST00000549274 F8WEM9 126 aa5.87□□□□□ -1.47
SMARCD1-206ENST00000549274 GAGE2AQ6NT46 116 aa5.87□□□□□ -1.47
SMARCD1-206ENST00000549274 ORMDL1Q9P0S3 153 aa5.87□□□□□ -1.47
SMARCD1-206ENST00000549274 TMEM256-PLSCR3K7ERE1 68 aa5.86□□□□□ -1.47
SMARCD1-206ENST00000549274 ERC2-IT1O76042 136 aa5.86□□□□□ -1.47
SMARCD1-206ENST00000549274 CLEC2BQ92478 149 aa5.86□□□□□ -1.47
SMARCD1-206ENST00000549274 LINC01600Q96MT4 127 aa5.85□□□□□ -1.47
SMARCD1-206ENST00000549274 FAM218AQ96MZ4 157 aa5.85□□□□□ -1.47
SMARCD1-206ENST00000549274 KRTAP1-4P0C5Y4 121 aa5.84□□□□□ -1.47
SMARCD1-206ENST00000549274 GTF2H5Q6ZYL4 71 aa5.84□□□□□ -1.47
SMARCD1-206ENST00000549274 DEFB105AQ8NG35 78 aa5.84□□□□□ -1.47
SMARCD1-206ENST00000549274 KRTAP29-1A8MX34 341 aaPredicted RBP5.83□□□□□ -1.48
SMARCD1-206ENST00000549274 TCL1BO95988 128 aa5.83□□□□□ -1.48
SMARCD1-206ENST00000549274 SSBP3-AS1Q7Z2R9 100 aa5.83□□□□□ -1.48
SMARCD1-206ENST00000549274 ST20-AS1Q8NBB2 130 aa5.83□□□□□ -1.48
SMARCD1-206ENST00000549274 NAA38Q9BRA0 125 aaKnown RBP5.83□□□□□ -1.48
SMARCD1-206ENST00000549274 SPCS1Q9Y6A9 102 aa5.83□□□□□ -1.48
SMARCD1-206ENST00000549274 UBE2V1Q13404 147 aa5.82□□□□□ -1.48
SMARCD1-206ENST00000549274 Q8N377 158 aa5.82□□□□□ -1.48
SMARCD1-206ENST00000549274 Q8NBF4 154 aa5.82□□□□□ -1.48
SMARCD1-206ENST00000549274 TYMSOSQ8TAI1 123 aa5.82□□□□□ -1.48
SMARCD1-206ENST00000549274 FLG2Q5D862 2391 aaPredicted RBP5.81□□□□□ -1.48
SMARCD1-206ENST00000549274 LINC01547P58512 204 aaPredicted RBP5.81□□□□□ -1.48
SMARCD1-206ENST00000549274 C9orf153Q5TBE3 101 aa5.81□□□□□ -1.48
SMARCD1-206ENST00000549274 KRTAP17-1Q9BYP8 105 aa5.81□□□□□ -1.48
SMARCD1-206ENST00000549274 KRTAP4-5Q9BYR2 181 aa5.81□□□□□ -1.48
SMARCD1-206ENST00000549274 H3BT86 120 aa5.8□□□□□ -1.48
SMARCD1-206ENST00000549274 Q6JHZ5 121 aa5.8□□□□□ -1.48
SMARCD1-206ENST00000549274 SPAG11AQ6PDA7 123 aa5.8□□□□□ -1.48
SMARCD1-206ENST00000549274 FAT3Q8TDW7 4589 aa5.79□□□□□ -1.48
SMARCD1-206ENST00000549274 IGLV9-49A0A0B4J1Y8 123 aa5.79□□□□□ -1.48
SMARCD1-206ENST00000549274 BAALC-AS2P0C853 105 aa5.79□□□□□ -1.48
SMARCD1-206ENST00000549274 NDUFV3P56181 108 aaKnown RBP5.79□□□□□ -1.48
SMARCD1-206ENST00000549274 IGLV8-61A0A075B6I0 122 aa5.78□□□□□ -1.48
SMARCD1-206ENST00000549274 A0A087X002 238 aa5.78□□□□□ -1.48
SMARCD1-206ENST00000549274 C9JAW5 83 aa5.78□□□□□ -1.48
SMARCD1-206ENST00000549274 JMJD7-PLA2G4BH0Y9G9 81 aa5.78□□□□□ -1.48
SMARCD1-206ENST00000549274 K7EP34 96 aa5.78□□□□□ -1.48
SMARCD1-206ENST00000549274 MOBPQ13875 183 aa5.78□□□□□ -1.48
SMARCD1-206ENST00000549274 PRR26Q8N8Z3 221 aa5.78□□□□□ -1.48
SMARCD1-206ENST00000549274 H3BMG7 143 aa5.77□□□□□ -1.49
SMARCD1-206ENST00000549274 SMIM29Q86T20 159 aa5.77□□□□□ -1.49
SMARCD1-206ENST00000549274 ANKRD29Q8N6D5 301 aa5.77□□□□□ -1.49
SMARCD1-206ENST00000549274 MYCBP2O75592 4640 aa5.76□□□□□ -1.49
SMARCD1-206ENST00000549274 KRTAP10-8P60410 259 aa5.76□□□□□ -1.49
SMARCD1-206ENST00000549274 CD164Q04900 197 aa5.76□□□□□ -1.49
SMARCD1-206ENST00000549274 ANAPC11Q9NYG5 84 aa5.76□□□□□ -1.49
SMARCD1-206ENST00000549274 SPINK1P00995 79 aa5.75□□□□□ -1.49
SMARCD1-206ENST00000549274 PDE6GP18545 87 aa5.75□□□□□ -1.49
SMARCD1-206ENST00000549274 RPS29P62273 56 aaKnown RBP5.75□□□□□ -1.49
SMARCD1-206ENST00000549274 KRTAP13-2Q52LG2 175 aa5.75□□□□□ -1.49
SMARCD1-206ENST00000549274 C3orf22Q8N5N4 141 aa5.75□□□□□ -1.49
SMARCD1-206ENST00000549274 LINC00304Q8N9R0 145 aa5.75□□□□□ -1.49
SMARCD1-206ENST00000549274 DSCR8Q96T75 97 aa5.75□□□□□ -1.49
SMARCD1-206ENST00000549274 KRTAP4-9Q9BYQ8 210 aa5.75□□□□□ -1.49
SMARCD1-206ENST00000549274 F8W1H4 67 aa5.74□□□□□ -1.49
SMARCD1-206ENST00000549274 RBM3P98179 157 aaKnown RBP5.74□□□□□ -1.49
SMARCD1-206ENST00000549274 TNXBP22105 4242 aa5.74□□□□□ -1.49
SMARCD1-206ENST00000549274 LRP1Q07954 4544 aaKnown RBP5.73□□□□□ -1.49
SMARCD1-206ENST00000549274 LIMD2Q9BT23 127 aa5.73□□□□□ -1.49
SMARCD1-206ENST00000549274 ABCA13Q86UQ4 5058 aa5.73□□□□□ -1.49
SMARCD1-206ENST00000549274 A0A1B0GW54 56 aa5.71□□□□□ -1.5
SMARCD1-206ENST00000549274 MT1HL1P0DM35 61 aa5.71□□□□□ -1.5
SMARCD1-206ENST00000549274 KRTAP23-1A1A580 65 aa5.7□□□□□ -1.5
SMARCD1-206ENST00000549274 Q6Q795 121 aa5.7□□□□□ -1.5
SMARCD1-206ENST00000549274 TEN1Q86WV5 123 aa5.7□□□□□ -1.5
SMARCD1-206ENST00000549274 KRTAP4-2Q9BYR5 136 aa5.7□□□□□ -1.5
SMARCD1-206ENST00000549274 SS18L2Q9UHA2 77 aa5.7□□□□□ -1.5
SMARCD1-206ENST00000549274 IGFL1Q6UW32 110 aa5.69□□□□□ -1.5
SMARCD1-206ENST00000549274 DMBT1Q9UGM3 2413 aaPredicted RBP5.69□□□□□ -1.5
SMARCD1-206ENST00000549274 LOC110117498A0A087WWA1 95 aa5.68□□□□□ -1.5
SMARCD1-206ENST00000549274 TRBV7-4A0A0J9YYF1 115 aa5.68□□□□□ -1.5
SMARCD1-206ENST00000549274 Q5XG85 94 aa5.67□□□□□ -1.5
SMARCD1-206ENST00000549274 OBSCN-AS1Q96MR7 158 aa5.67□□□□□ -1.5
SMARCD1-206ENST00000549274 CCKP06307 115 aa5.66□□□□□ -1.5
SMARCD1-206ENST00000549274 MTURNQ8N3F0 131 aa5.66□□□□□ -1.5
SMARCD1-206ENST00000549274 PRO0461Q9UI25 63 aa5.66□□□□□ -1.5
SMARCD1-206ENST00000549274 TRBV7-7A0A0K0K1E9 115 aa5.65□□□□□ -1.5
SMARCD1-206ENST00000549274 A0A1B0GV90 55 aa5.65□□□□□ -1.5
SMARCD1-206ENST00000549274 ASB16-AS1Q495Z4 193 aa5.64□□□□□ -1.51
SMARCD1-206ENST00000549274 Q6ZQT0 140 aa5.64□□□□□ -1.51
SMARCD1-206ENST00000549274 PCLOQ9Y6V0 5065 aa5.63□□□□□ -1.51
SMARCD1-206ENST00000549274 A0A1B0GV72 72 aa5.63□□□□□ -1.51
SMARCD1-206ENST00000549274 HRCT1Q6UXD1 115 aa5.63□□□□□ -1.51
SMARCD1-206ENST00000549274 Q75L30 129 aa5.63□□□□□ -1.51
SMARCD1-206ENST00000549274 VPS25Q9BRG1 176 aa5.63□□□□□ -1.51
SMARCD1-206ENST00000549274 C14orf132Q9NPU4 83 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms