RNA–Protein interactions for RNA: ENST00000547715.1

PTPRB-205, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 2

Gene PTPRB, Length 639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-205ENST00000547715 H0YGX0 51 aa8.46□□□□□ -1.06
PTPRB-205ENST00000547715 TRAV13-2A0A0B4J235 113 aa8.45□□□□□ -1.06
PTPRB-205ENST00000547715 BAALC-AS2P0C853 105 aa8.45□□□□□ -1.06
PTPRB-205ENST00000547715 RPL39P62891 51 aaKnown RBP8.45□□□□□ -1.06
PTPRB-205ENST00000547715 IGLV5-45A0A087WSX0 123 aa8.44□□□□□ -1.06
PTPRB-205ENST00000547715 TRBV10-3A0A0K0K1G6 114 aa8.44□□□□□ -1.06
PTPRB-205ENST00000547715 DNAL4O96015 105 aa8.44□□□□□ -1.06
PTPRB-205ENST00000547715 IGLV7-46A0A075B6I9 117 aa8.43□□□□□ -1.06
PTPRB-205ENST00000547715 RPL28P46779 137 aaKnown RBP8.43□□□□□ -1.06
PTPRB-205ENST00000547715 KIAA0087Q14695 138 aa8.43□□□□□ -1.06
PTPRB-205ENST00000547715 FAM19A3Q7Z5A8 133 aa8.43□□□□□ -1.06
PTPRB-205ENST00000547715 ANAPC11Q9NYG5 84 aa8.43□□□□□ -1.06
PTPRB-205ENST00000547715 hADV29S1A0JD25 119 aa8.42□□□□□ -1.06
PTPRB-205ENST00000547715 FAM104AQ969W3 186 aa8.42□□□□□ -1.06
PTPRB-205ENST00000547715 C22orf24Q9Y442 160 aa8.42□□□□□ -1.06
PTPRB-205ENST00000547715 LINC01547P58512 204 aaPredicted RBP8.41□□□□□ -1.06
PTPRB-205ENST00000547715 LINC00304Q8N9R0 145 aa8.41□□□□□ -1.06
PTPRB-205ENST00000547715 CLEC2BQ92478 149 aa8.41□□□□□ -1.06
PTPRB-205ENST00000547715 ATP5EP56381 51 aaPredicted RBP8.4□□□□□ -1.06
PTPRB-205ENST00000547715 KRTAP13-2Q52LG2 175 aa8.4□□□□□ -1.06
PTPRB-205ENST00000547715 LINC00308Q8TCZ7 52 aa8.4□□□□□ -1.06
PTPRB-205ENST00000547715 LINC00242Q5T6M2 205 aa8.39□□□□□ -1.07
PTPRB-205ENST00000547715 OBSCN-AS1Q96MR7 158 aa8.39□□□□□ -1.07
PTPRB-205ENST00000547715 IGLV5-39A0A0G2JS06 123 aa8.38□□□□□ -1.07
PTPRB-205ENST00000547715 XAGE1AQ9HD64 81 aa8.38□□□□□ -1.07
PTPRB-205ENST00000547715 PRO0628Q9UI54 55 aa8.38□□□□□ -1.07
PTPRB-205ENST00000547715 H3BQ85 93 aa8.37□□□□□ -1.07
PTPRB-205ENST00000547715 NPC2P61916 151 aa8.37□□□□□ -1.07
PTPRB-205ENST00000547715 ADAMTSL4-AS1Q5T5F5 129 aa8.37□□□□□ -1.07
PTPRB-205ENST00000547715 SERP1Q9Y6X1 66 aa8.37□□□□□ -1.07
PTPRB-205ENST00000547715 JMJD7-PLA2G4BH0Y9G9 81 aa8.36□□□□□ -1.07
PTPRB-205ENST00000547715 MRPL55Q7Z7F7 128 aaKnown RBP8.36□□□□□ -1.07
PTPRB-205ENST00000547715 SMCR5Q8TEV8 140 aa8.36□□□□□ -1.07
PTPRB-205ENST00000547715 NDUFC1O43677 76 aa8.35□□□□□ -1.07
PTPRB-205ENST00000547715 RPL37AP8A6NKH3 93 aa8.33□□□□□ -1.08
PTPRB-205ENST00000547715 FAM229BQ4G0N7 80 aa8.33□□□□□ -1.08
PTPRB-205ENST00000547715 TOMM7Q9P0U1 55 aa8.33□□□□□ -1.08
PTPRB-205ENST00000547715 UBE2AP49459 152 aa8.31□□□□□ -1.08
PTPRB-205ENST00000547715 C6orf226Q5I0X4 101 aa8.31□□□□□ -1.08
PTPRB-205ENST00000547715 LINC00167Q96N53 147 aa8.31□□□□□ -1.08
PTPRB-205ENST00000547715 LINC00337Q8N6G1 96 aa8.3□□□□□ -1.08
PTPRB-205ENST00000547715 SMIM26A0A096LP01 95 aa8.29□□□□□ -1.08
PTPRB-205ENST00000547715 FAM236DA0A1B0GTK5 79 aa8.29□□□□□ -1.08
PTPRB-205ENST00000547715 FAM236CP0DP71 79 aa8.29□□□□□ -1.08
PTPRB-205ENST00000547715 LINC01561Q8N1V8 128 aa8.29□□□□□ -1.08
PTPRB-205ENST00000547715 CCKP06307 115 aa8.28□□□□□ -1.08
PTPRB-205ENST00000547715 ASB16-AS1Q495Z4 193 aa8.28□□□□□ -1.08
PTPRB-205ENST00000547715 KRTAP13-1Q8IUC0 172 aa8.28□□□□□ -1.08
PTPRB-205ENST00000547715 KRTAP4-1Q9BYQ7 146 aa8.28□□□□□ -1.08
PTPRB-205ENST00000547715 LAMTOR3Q9UHA4 124 aa8.28□□□□□ -1.08
PTPRB-205ENST00000547715 TRAV7A0A075B6U4 112 aa8.27□□□□□ -1.09
PTPRB-205ENST00000547715 PDE6GP18545 87 aa8.27□□□□□ -1.09
PTPRB-205ENST00000547715 Q8IZM0 81 aa8.27□□□□□ -1.09
PTPRB-205ENST00000547715 ZNF625Q96I27 306 aaPredicted RBP8.27□□□□□ -1.09
PTPRB-205ENST00000547715 Q5XG85 94 aa8.26□□□□□ -1.09
PTPRB-205ENST00000547715 UBL5Q9BZL1 73 aa8.26□□□□□ -1.09
PTPRB-205ENST00000547715 ORMDL1Q9P0S3 153 aa8.26□□□□□ -1.09
PTPRB-205ENST00000547715 CDKN2A-AS1Q9UH64 79 aa8.25□□□□□ -1.09
PTPRB-205ENST00000547715 TMEM256-PLSCR3K7ERE1 68 aa8.24□□□□□ -1.09
PTPRB-205ENST00000547715 PFN2P35080 140 aa8.24□□□□□ -1.09
PTPRB-205ENST00000547715 KLKP1Q107X0 134 aa8.24□□□□□ -1.09
PTPRB-205ENST00000547715 PRLHP81277 87 aa8.23□□□□□ -1.09
PTPRB-205ENST00000547715 KRTAP13-3Q3SY46 172 aa8.23□□□□□ -1.09
PTPRB-205ENST00000547715 FP248Q71RG6 208 aaPredicted RBP8.23□□□□□ -1.09
PTPRB-205ENST00000547715 IGKV2-28A0A075B6P5 120 aa8.22□□□□□ -1.09
PTPRB-205ENST00000547715 SMIM1B2RUZ4 78 aa8.22□□□□□ -1.09
PTPRB-205ENST00000547715 IGKV2D-28P01615 120 aa8.22□□□□□ -1.09
PTPRB-205ENST00000547715 SEC61BP60468 96 aaKnown RBP8.22□□□□□ -1.09
PTPRB-205ENST00000547715 NKAPP1Q8N9T2 125 aa8.22□□□□□ -1.09
PTPRB-205ENST00000547715 ERC2-IT1O76042 136 aa8.21□□□□□ -1.1
PTPRB-205ENST00000547715 HRCT1Q6UXD1 115 aa8.21□□□□□ -1.1
PTPRB-205ENST00000547715 LINC00846Q9NV44 126 aa8.21□□□□□ -1.1
PTPRB-205ENST00000547715 SPAG11AQ6PDA7 123 aa8.2□□□□□ -1.1
PTPRB-205ENST00000547715 DSCR8Q96T75 97 aa8.2□□□□□ -1.1
PTPRB-205ENST00000547715 SND1-IT1Q9HBX3 110 aa8.2□□□□□ -1.1
PTPRB-205ENST00000547715 C4orf26Q17RF5 130 aa8.19□□□□□ -1.1
PTPRB-205ENST00000547715 FAM19A1Q7Z5A9 133 aa8.19□□□□□ -1.1
PTPRB-205ENST00000547715 IGLV5-37A0A075B6J1 123 aa8.18□□□□□ -1.1
PTPRB-205ENST00000547715 IGKV3D-7A0A0C4DH55 119 aa8.18□□□□□ -1.1
PTPRB-205ENST00000547715 SOSTDC1Q6X4U4 206 aa8.18□□□□□ -1.1
PTPRB-205ENST00000547715 FAM218AQ96MZ4 157 aa8.18□□□□□ -1.1
PTPRB-205ENST00000547715 C14orf132Q9NPU4 83 aa8.18□□□□□ -1.1
PTPRB-205ENST00000547715 CXCL6P80162 114 aa8.16□□□□□ -1.1
PTPRB-205ENST00000547715 SMIM11BQ8TCY0 68 aa8.16□□□□□ -1.1
PTPRB-205ENST00000547715 COX7B2Q8TF08 81 aa8.16□□□□□ -1.1
PTPRB-205ENST00000547715 LOC110117498A0A087WWA1 95 aa8.15□□□□□ -1.1
PTPRB-205ENST00000547715 LCE2CQ5TA81 110 aa8.15□□□□□ -1.1
PTPRB-205ENST00000547715 H7BZZ5 65 aa8.13□□□□□ -1.11
PTPRB-205ENST00000547715 C20orf197Q8N268 126 aa8.12□□□□□ -1.11
PTPRB-205ENST00000547715 MIR7-3HGQ8N6C7 128 aa8.12□□□□□ -1.11
PTPRB-205ENST00000547715 HIGD2AQ9BW72 106 aa8.12□□□□□ -1.11
PTPRB-205ENST00000547715 V9GYY9 64 aa8.11□□□□□ -1.11
PTPRB-205ENST00000547715 M0R378 163 aa8.1□□□□□ -1.11
PTPRB-205ENST00000547715 LINC00158P58513 81 aa8.1□□□□□ -1.11
PTPRB-205ENST00000547715 COX17Q14061 63 aa8.1□□□□□ -1.11
PTPRB-205ENST00000547715 Q8NBF4 154 aa8.1□□□□□ -1.11
PTPRB-205ENST00000547715 MT1HP80294 61 aa8.09□□□□□ -1.11
PTPRB-205ENST00000547715 SPRR4Q96PI1 79 aa8.09□□□□□ -1.11
PTPRB-205ENST00000547715 CYSTM1Q9H1C7 97 aa8.09□□□□□ -1.11
PTPRB-205ENST00000547715 A0A087WVE0 104 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms