RNA–Protein interactions for RNA: ENST00000547417.1

CPNE8-205, Transcript of copine 8, humanhuman

TSL 2

Gene CPNE8, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-205ENST00000547417 THOC2Q8NI27 1593 aaKnown RBP0.04□□□□□ -2.4
CPNE8-205ENST00000547417 NDUFA3O95167 84 aa0.04□□□□□ -2.4
CPNE8-205ENST00000547417 SMIM13P0DJ93 91 aa0.04□□□□□ -2.4
CPNE8-205ENST00000547417 SPRR2BP35325 72 aa0.04□□□□□ -2.4
CPNE8-205ENST00000547417 NREPQ16612 68 aa0.04□□□□□ -2.4
CPNE8-205ENST00000547417 DEFB135Q30KP9 77 aa0.04□□□□□ -2.4
CPNE8-205ENST00000547417 SSPOA2VEC9 5147 aa0.04□□□□□ -2.4
CPNE8-205ENST00000547417 FLGP20930 4061 aaPredicted RBP0.04□□□□□ -2.4
CPNE8-205ENST00000547417 NBPF19A0A087WUL8 3843 aa0.04□□□□□ -2.4
CPNE8-205ENST00000547417 LYSTQ99698 3801 aa0.04□□□□□ -2.4
CPNE8-205ENST00000547417 CD163L1Q9NR16 1453 aa0.03□□□□□ -2.4
CPNE8-205ENST00000547417 PLXNC1O60486 1568 aa0.03□□□□□ -2.4
CPNE8-205ENST00000547417 ADAMTS12P58397 1594 aa0.03□□□□□ -2.4
CPNE8-205ENST00000547417 CICQ96RK0 1608 aaPredicted RBP0.03□□□□□ -2.4
CPNE8-205ENST00000547417 EIF2AK4Q9P2K8 1649 aaKnown RBP0.03□□□□□ -2.4
CPNE8-205ENST00000547417 NBEAQ8NFP9 2946 aa0.03□□□□□ -2.4
CPNE8-205ENST00000547417 C3orf79P0CE67 100 aa0.03□□□□□ -2.4
CPNE8-205ENST00000547417 CEP290O15078 2479 aa0.03□□□□□ -2.41
CPNE8-205ENST00000547417 LRP1BQ9NZR2 4599 aa0.03□□□□□ -2.41
CPNE8-205ENST00000547417 GCN1Q92616 2671 aaKnown RBP0.02□□□□□ -2.41
CPNE8-205ENST00000547417 SRRM2Q9UQ35 2752 aaKnown RBP0.02□□□□□ -2.41
CPNE8-205ENST00000547417 WIZO95785 1651 aa0.02□□□□□ -2.41
CPNE8-205ENST00000547417 NDUFA4O00483 81 aa0.02□□□□□ -2.41
CPNE8-205ENST00000547417 WDR87Q6ZQQ6 2873 aa0.02□□□□□ -2.41
CPNE8-205ENST00000547417 DEPDC5O75140 1603 aa0.02□□□□□ -2.41
CPNE8-205ENST00000547417 PLCH1Q4KWH8 1693 aa0.02□□□□□ -2.41
CPNE8-205ENST00000547417 SPTBN4Q9H254 2564 aa0.01□□□□□ -2.41
CPNE8-205ENST00000547417 PRO3102Q9H379 93 aa0.01□□□□□ -2.41
CPNE8-205ENST00000547417 DDX60LQ5H9U9 1706 aaKnown RBP0.01□□□□□ -2.41
CPNE8-205ENST00000547417 DNAH3Q8TD57 4116 aa0.01□□□□□ -2.41
CPNE8-205ENST00000547417 SPG11Q96JI7 2443 aa0.01□□□□□ -2.41
CPNE8-205ENST00000547417 DNAH6Q9C0G6 4158 aa0□□□□□ -2.41
CPNE8-205ENST00000547417 RALGAPBQ86X10 1494 aa0□□□□□ -2.41
CPNE8-205ENST00000547417 DNAH9Q9NYC9 4486 aa-0□□□□□ -2.41
CPNE8-205ENST00000547417 LRRK2Q5S007 2527 aa-0.01□□□□□ -2.41
CPNE8-205ENST00000547417 RICTORQ6R327 1708 aa-0.01□□□□□ -2.41
CPNE8-205ENST00000547417 HFM1A2PYH4 1435 aa-0.01□□□□□ -2.41
CPNE8-205ENST00000547417 VPS13BQ7Z7G8 4022 aa-0.01□□□□□ -2.41
CPNE8-205ENST00000547417 ITPR3Q14573 2671 aa-0.01□□□□□ -2.41
CPNE8-205ENST00000547417 TEP1Q99973 2627 aaKnown RBP-0.01□□□□□ -2.41
CPNE8-205ENST00000547417 LMTK2Q8IWU2 1503 aa-0.02□□□□□ -2.41
CPNE8-205ENST00000547417 MRPL33O75394 65 aaKnown RBP-0.02□□□□□ -2.41
CPNE8-205ENST00000547417 LINC00158P58513 81 aa-0.02□□□□□ -2.41
CPNE8-205ENST00000547417 LRRIQ1Q96JM4 1722 aa-0.02□□□□□ -2.41
CPNE8-205ENST00000547417 FASNP49327 2511 aaKnown RBP-0.03□□□□□ -2.41
CPNE8-205ENST00000547417 ITSN1Q15811 1721 aa-0.03□□□□□ -2.41
CPNE8-205ENST00000547417 MYO5CQ9NQX4 1742 aa-0.03□□□□□ -2.41
CPNE8-205ENST00000547417 DEFB131BA0A096LNP1 70 aa-0.03□□□□□ -2.41
CPNE8-205ENST00000547417 LYNX1G3V0Z9 82 aa-0.03□□□□□ -2.41
CPNE8-205ENST00000547417 H0YGG7 62 aa-0.03□□□□□ -2.41
CPNE8-205ENST00000547417 RNF17Q9BXT8 1623 aaKnown RBP-0.03□□□□□ -2.41
CPNE8-205ENST00000547417 SVEP1Q4LDE5 3571 aa-0.03□□□□□ -2.41
CPNE8-205ENST00000547417 FAT3Q8TDW7 4589 aa-0.03□□□□□ -2.41
CPNE8-205ENST00000547417 PKD1L2Q7Z442 2459 aa-0.04□□□□□ -2.42
CPNE8-205ENST00000547417 MUC2Q02817 5179 aa-0.04□□□□□ -2.42
CPNE8-205ENST00000547417 H0YAA0 97 aa-0.04□□□□□ -2.42
CPNE8-205ENST00000547417 KCNQ1DNQ9H478 68 aa-0.04□□□□□ -2.42
CPNE8-205ENST00000547417 UGGT2Q9NYU1 1516 aa-0.04□□□□□ -2.42
CPNE8-205ENST00000547417 PARP4Q9UKK3 1724 aaKnown RBP-0.04□□□□□ -2.42
CPNE8-205ENST00000547417 VPS13DQ5THJ4 4388 aa-0.05□□□□□ -2.42
CPNE8-205ENST00000547417 IQGAP3Q86VI3 1631 aa-0.05□□□□□ -2.42
CPNE8-205ENST00000547417 INO80Q9ULG1 1556 aaPredicted RBP-0.05□□□□□ -2.42
CPNE8-205ENST00000547417 UBL5Q9BZL1 73 aa-0.05□□□□□ -2.42
CPNE8-205ENST00000547417 SMCO4Q9NRQ5 59 aa-0.05□□□□□ -2.42
CPNE8-205ENST00000547417 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.05□□□□□ -2.42
CPNE8-205ENST00000547417 ZC3H13Q5T200 1668 aaKnown RBP-0.05□□□□□ -2.42
CPNE8-205ENST00000547417 NHSQ6T4R5 1651 aa-0.05□□□□□ -2.42
CPNE8-205ENST00000547417 MTORP42345 2549 aa-0.06□□□□□ -2.42
CPNE8-205ENST00000547417 DUOX2Q9NRD8 1548 aa-0.06□□□□□ -2.42
CPNE8-205ENST00000547417 TJP1Q07157 1748 aa-0.06□□□□□ -2.42
CPNE8-205ENST00000547417 CUBNO60494 3623 aa-0.06□□□□□ -2.42
CPNE8-205ENST00000547417 PDCD5O14737 125 aa-0.06□□□□□ -2.42
CPNE8-205ENST00000547417 SPRR2AP35326 72 aa-0.06□□□□□ -2.42
CPNE8-205ENST00000547417 LAMA5O15230 3695 aa-0.06□□□□□ -2.42
CPNE8-205ENST00000547417 SONP18583 2426 aaKnown RBP-0.06□□□□□ -2.42
CPNE8-205ENST00000547417 NBEAL2Q6ZNJ1 2754 aa-0.06□□□□□ -2.42
CPNE8-205ENST00000547417 CDC42BPGQ6DT37 1551 aa-0.06□□□□□ -2.42
CPNE8-205ENST00000547417 H3BVH4 76 aa-0.07□□□□□ -2.42
CPNE8-205ENST00000547417 RANBP2P49792 3224 aaKnown RBP-0.07□□□□□ -2.42
CPNE8-205ENST00000547417 FRYQ5TBA9 3013 aa-0.07□□□□□ -2.42
CPNE8-205ENST00000547417 A0A0C4DFX4 3053 aa-0.08□□□□□ -2.42
CPNE8-205ENST00000547417 LAMA1P25391 3075 aa-0.08□□□□□ -2.42
CPNE8-205ENST00000547417 USP9YO00507 2555 aaPredicted RBP-0.08□□□□□ -2.42
CPNE8-205ENST00000547417 NRAPQ86VF7 1730 aa-0.08□□□□□ -2.42
CPNE8-205ENST00000547417 KIAA0586Q9BVV6 1533 aa-0.08□□□□□ -2.42
CPNE8-205ENST00000547417 DSTQ03001 7570 aaKnown RBP-0.08□□□□□ -2.42
CPNE8-205ENST00000547417 ATXN8Q156A1 80 aa-0.09□□□□□ -2.42
CPNE8-205ENST00000547417 ENHOQ6UWT2 76 aa-0.09□□□□□ -2.42
CPNE8-205ENST00000547417 ANK3Q12955 4377 aaKnown RBP-0.1□□□□□ -2.42
CPNE8-205ENST00000547417 DIP2AQ14689 1571 aa-0.1□□□□□ -2.42
CPNE8-205ENST00000547417 IAPPP10997 89 aa-0.1□□□□□ -2.43
CPNE8-205ENST00000547417 DEFA5Q01523 94 aa-0.1□□□□□ -2.43
CPNE8-205ENST00000547417 DEFB114Q30KQ6 69 aa-0.1□□□□□ -2.43
CPNE8-205ENST00000547417 APOBP04114 4563 aaKnown RBP-0.1□□□□□ -2.43
CPNE8-205ENST00000547417 ASXL1Q8IXJ9 1541 aa-0.1□□□□□ -2.43
CPNE8-205ENST00000547417 FAM186AA6NE01 2351 aa-0.1□□□□□ -2.43
CPNE8-205ENST00000547417 ABCA9Q8IUA7 1624 aa-0.1□□□□□ -2.43
CPNE8-205ENST00000547417 PKHD1L1Q86WI1 4243 aa-0.1□□□□□ -2.43
CPNE8-205ENST00000547417 CCDC168Q8NDH2 2452 aa-0.1□□□□□ -2.43
CPNE8-205ENST00000547417 MYO18BQ8IUG5 2567 aa-0.1□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms