RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 C12orf57Q99622 126 aa5.19□□□□□ -1.58
YBX3-218ENST00000546298 NHP2Q9NX24 153 aaKnown RBP5.19□□□□□ -1.58
YBX3-218ENST00000546298 H7C2G1 150 aa5.18□□□□□ -1.58
YBX3-218ENST00000546298 PCP2Q8IVA1 136 aa5.18□□□□□ -1.58
YBX3-218ENST00000546298 IGLV5-48A0A075B6I7 105 aa5.16□□□□□ -1.58
YBX3-218ENST00000546298 HSBP1L1C9JCN9 74 aa5.16□□□□□ -1.58
YBX3-218ENST00000546298 S100A2P29034 98 aa5.16□□□□□ -1.58
YBX3-218ENST00000546298 VAMP3Q15836 100 aa5.16□□□□□ -1.58
YBX3-218ENST00000546298 Q5XG85 94 aa5.15□□□□□ -1.59
YBX3-218ENST00000546298 MUC2Q02817 5179 aa5.14□□□□□ -1.59
YBX3-218ENST00000546298 SMIM29Q86T20 159 aa5.14□□□□□ -1.59
YBX3-218ENST00000546298 SMIM11BQ8TCY0 68 aa5.14□□□□□ -1.59
YBX3-218ENST00000546298 F8WEM9 126 aa5.13□□□□□ -1.59
YBX3-218ENST00000546298 S100A6P06703 90 aa5.13□□□□□ -1.59
YBX3-218ENST00000546298 KRTAP4-1Q9BYQ7 146 aa5.13□□□□□ -1.59
YBX3-218ENST00000546298 HIST3H2BBQ8N257 126 aa5.12□□□□□ -1.59
YBX3-218ENST00000546298 HIST1H2BLQ99880 126 aa5.12□□□□□ -1.59
YBX3-218ENST00000546298 C9orf92A6NGG3 77 aa5.11□□□□□ -1.59
YBX3-218ENST00000546298 TCL1BO95988 128 aa5.11□□□□□ -1.59
YBX3-218ENST00000546298 PCOTHQ58A44 107 aa5.11□□□□□ -1.59
YBX3-218ENST00000546298 C1orf195Q5TG92 126 aa5.1□□□□□ -1.59
YBX3-218ENST00000546298 LINC00575Q6W349 94 aa5.1□□□□□ -1.59
YBX3-218ENST00000546298 FAT4Q6V0I7 4981 aa5.09□□□□□ -1.59
YBX3-218ENST00000546298 hADV29S1A0JD25 119 aa5.09□□□□□ -1.59
YBX3-218ENST00000546298 Q6JHZ5 121 aa5.09□□□□□ -1.59
YBX3-218ENST00000546298 KRTAP4-11Q9BYQ6 195 aa5.09□□□□□ -1.59
YBX3-218ENST00000546298 IGLV8-61A0A075B6I0 122 aa5.08□□□□□ -1.6
YBX3-218ENST00000546298 A0A0G2JQZ4 141 aa5.08□□□□□ -1.6
YBX3-218ENST00000546298 SCGB1D1O95968 90 aa5.07□□□□□ -1.6
YBX3-218ENST00000546298 BVES-AS1Q5T3Y7 98 aa5.07□□□□□ -1.6
YBX3-218ENST00000546298 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.07□□□□□ -1.6
YBX3-218ENST00000546298 Q6ZQY7 126 aa5.07□□□□□ -1.6
YBX3-218ENST00000546298 HIST1H4GQ99525 98 aa5.07□□□□□ -1.6
YBX3-218ENST00000546298 MUC17Q685J3 4493 aa5.07□□□□□ -1.6
YBX3-218ENST00000546298 OCIAD2Q56VL3 154 aa5.06□□□□□ -1.6
YBX3-218ENST00000546298 PPDPFLQ8WWR9 84 aa5.06□□□□□ -1.6
YBX3-218ENST00000546298 SNCGO76070 127 aa5.05□□□□□ -1.6
YBX3-218ENST00000546298 KRTAP5-3Q6L8H2 238 aa5.05□□□□□ -1.6
YBX3-218ENST00000546298 CLEC2BQ92478 149 aa5.05□□□□□ -1.6
YBX3-218ENST00000546298 SNHG12Q9BXW3 62 aa5.05□□□□□ -1.6
YBX3-218ENST00000546298 TRBV7-7A0A0K0K1E9 115 aa5.04□□□□□ -1.6
YBX3-218ENST00000546298 DLEU1O43261 78 aa5.04□□□□□ -1.6
YBX3-218ENST00000546298 COX8AP10176 69 aa5.04□□□□□ -1.6
YBX3-218ENST00000546298 RPL37P61927 97 aaKnown RBP5.04□□□□□ -1.6
YBX3-218ENST00000546298 IGFL1Q6UW32 110 aa5.02□□□□□ -1.61
YBX3-218ENST00000546298 RAB37Q96AX2 223 aa5.02□□□□□ -1.61
YBX3-218ENST00000546298 H0YGX0 51 aa5.01□□□□□ -1.61
YBX3-218ENST00000546298 CFC1BP0CG36 223 aa5.01□□□□□ -1.61
YBX3-218ENST00000546298 TSTD3H0UI37 97 aa5□□□□□ -1.61
YBX3-218ENST00000546298 PYY3Q5JQD4 70 aa5□□□□□ -1.61
YBX3-218ENST00000546298 HIGD1BQ9P298 99 aa5□□□□□ -1.61
YBX3-218ENST00000546298 LST1O00453 97 aa4.99□□□□□ -1.61
YBX3-218ENST00000546298 CFC1P0CG37 223 aa4.99□□□□□ -1.61
YBX3-218ENST00000546298 KRTAP19-2Q3LHN2 52 aa4.99□□□□□ -1.61
YBX3-218ENST00000546298 C14orf144Q96I85 54 aa4.99□□□□□ -1.61
YBX3-218ENST00000546298 A0A0B4J2C4 111 aa4.98□□□□□ -1.61
YBX3-218ENST00000546298 H3BUT2 72 aa4.98□□□□□ -1.61
YBX3-218ENST00000546298 MT1HP80294 61 aa4.98□□□□□ -1.61
YBX3-218ENST00000546298 COX6B2Q6YFQ2 88 aa4.98□□□□□ -1.61
YBX3-218ENST00000546298 SS18L2Q9UHA2 77 aa4.98□□□□□ -1.61
YBX3-218ENST00000546298 SPATA45Q537H7 98 aa4.97□□□□□ -1.61
YBX3-218ENST00000546298 Q6Q795 121 aa4.97□□□□□ -1.61
YBX3-218ENST00000546298 ATP11AUNQ6ZP68 121 aa4.97□□□□□ -1.61
YBX3-218ENST00000546298 VAMP8Q9BV40 100 aa4.97□□□□□ -1.61
YBX3-218ENST00000546298 PAM16Q9Y3D7 125 aa4.97□□□□□ -1.61
YBX3-218ENST00000546298 A0A1B0GX51 115 aa4.96□□□□□ -1.62
YBX3-218ENST00000546298 NDUFV3P56181 108 aaKnown RBP4.96□□□□□ -1.62
YBX3-218ENST00000546298 TEN1Q86WV5 123 aa4.96□□□□□ -1.62
YBX3-218ENST00000546298 Q75L30 129 aa4.95□□□□□ -1.62
YBX3-218ENST00000546298 OBSCN-AS1Q96MR7 158 aa4.95□□□□□ -1.62
YBX3-218ENST00000546298 A0A1B0GV90 55 aa4.94□□□□□ -1.62
YBX3-218ENST00000546298 M0R2T5 61 aa4.94□□□□□ -1.62
YBX3-218ENST00000546298 CEND1Q8N111 149 aa4.94□□□□□ -1.62
YBX3-218ENST00000546298 KRTAP9-8Q9BYQ0 159 aa4.94□□□□□ -1.62
YBX3-218ENST00000546298 PRO1854Q9UHT4 67 aa4.94□□□□□ -1.62
YBX3-218ENST00000546298 H3BMG7 143 aa4.93□□□□□ -1.62
YBX3-218ENST00000546298 FABP2P12104 132 aa4.93□□□□□ -1.62
YBX3-218ENST00000546298 C2orf91Q6ZV80 131 aa4.93□□□□□ -1.62
YBX3-218ENST00000546298 FAM218AQ96MZ4 157 aa4.93□□□□□ -1.62
YBX3-218ENST00000546298 Q96NJ1 140 aa4.93□□□□□ -1.62
YBX3-218ENST00000546298 A0A087WSZ3 146 aa4.91□□□□□ -1.62
YBX3-218ENST00000546298 H3BQ85 93 aa4.91□□□□□ -1.62
YBX3-218ENST00000546298 M0R143 59 aa4.9□□□□□ -1.63
YBX3-218ENST00000546298 DNAL4O96015 105 aa4.89□□□□□ -1.63
YBX3-218ENST00000546298 FXYD2P54710 66 aa4.89□□□□□ -1.63
YBX3-218ENST00000546298 KRTAP10-6P60371 365 aaPredicted RBP4.89□□□□□ -1.63
YBX3-218ENST00000546298 TRIAP1O43715 76 aa4.88□□□□□ -1.63
YBX3-218ENST00000546298 COX6CP09669 75 aa4.88□□□□□ -1.63
YBX3-218ENST00000546298 PSMB2P49721 201 aa4.88□□□□□ -1.63
YBX3-218ENST00000546298 HSD52Q0P140 79 aa4.88□□□□□ -1.63
YBX3-218ENST00000546298 C20orf166-AS1Q96NR2 134 aa4.88□□□□□ -1.63
YBX3-218ENST00000546298 ORMDL1Q9P0S3 153 aa4.88□□□□□ -1.63
YBX3-218ENST00000546298 CRCT1Q9UGL9 99 aa4.88□□□□□ -1.63
YBX3-218ENST00000546298 A8MUU9 505 aa4.87□□□□□ -1.63
YBX3-218ENST00000546298 ANKRD29Q8N6D5 301 aa4.87□□□□□ -1.63
YBX3-218ENST00000546298 TRBV20-1A0A075B6N2 111 aa4.86□□□□□ -1.63
YBX3-218ENST00000546298 A0A1W2PNM2 257 aa4.86□□□□□ -1.63
YBX3-218ENST00000546298 TMEM256-PLSCR3K7ERE1 68 aa4.86□□□□□ -1.63
YBX3-218ENST00000546298 SIGMAR1Q99720 223 aa4.86□□□□□ -1.63
YBX3-218ENST00000546298 TRBV7-4A0A0J9YYF1 115 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms