RNA–Protein interactions for RNA: ENST00000546079.5

CLPTM1-203, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-203ENST00000546079 MRPL55Q7Z7F7 128 aaKnown RBP10.55□□□□□ -0.72
CLPTM1-203ENST00000546079 DEFB116Q30KQ4 102 aa10.53□□□□□ -0.72
CLPTM1-203ENST00000546079 ATP11AUNQ6ZP68 121 aa10.53□□□□□ -0.72
CLPTM1-203ENST00000546079 PRR15LQ9BU68 103 aa10.53□□□□□ -0.72
CLPTM1-203ENST00000546079 FBN1P35555 2871 aaKnown RBP10.53□□□□□ -0.72
CLPTM1-203ENST00000546079 STAB1Q9NY15 2570 aa10.52□□□□□ -0.73
CLPTM1-203ENST00000546079 H0Y9P7 68 aa10.51□□□□□ -0.73
CLPTM1-203ENST00000546079 Q75L30 129 aa10.51□□□□□ -0.73
CLPTM1-203ENST00000546079 RETNQ9HD89 108 aa10.51□□□□□ -0.73
CLPTM1-203ENST00000546079 IGFL1Q6UW32 110 aa10.51□□□□□ -0.73
CLPTM1-203ENST00000546079 LOC101927531A0A1B0GV80 90 aa10.5□□□□□ -0.73
CLPTM1-203ENST00000546079 FAM168BA1KXE4 195 aa10.5□□□□□ -0.73
CLPTM1-203ENST00000546079 LCA10Q71F78 164 aa10.49□□□□□ -0.73
CLPTM1-203ENST00000546079 C9orf163Q8N9P6 203 aa10.49□□□□□ -0.73
CLPTM1-203ENST00000546079 KRTAP7-1Q8IUC3 87 aa10.48□□□□□ -0.73
CLPTM1-203ENST00000546079 LINC01556Q5JQF7 62 aa10.47□□□□□ -0.73
CLPTM1-203ENST00000546079 SPTSSBQ8NFR3 76 aa10.47□□□□□ -0.73
CLPTM1-203ENST00000546079 RBM12B-AS1Q9P1G2 102 aa10.47□□□□□ -0.73
CLPTM1-203ENST00000546079 PKD1L1Q8TDX9 2849 aa10.47□□□□□ -0.73
CLPTM1-203ENST00000546079 A0A087WSZ3 146 aa10.46□□□□□ -0.73
CLPTM1-203ENST00000546079 A0A0G2JQZ4 141 aa10.46□□□□□ -0.73
CLPTM1-203ENST00000546079 A0A1W2PNN7 141 aa10.46□□□□□ -0.73
CLPTM1-203ENST00000546079 NDUFS5O43920 106 aa10.46□□□□□ -0.73
CLPTM1-203ENST00000546079 PHF5AQ7RTV0 110 aaKnown RBP10.46□□□□□ -0.73
CLPTM1-203ENST00000546079 CMYA5Q8N3K9 4069 aa10.46□□□□□ -0.73
CLPTM1-203ENST00000546079 CASC2Q6XLA1 102 aa10.46□□□□□ -0.74
CLPTM1-203ENST00000546079 IGLV8-61A0A075B6I0 122 aa10.45□□□□□ -0.74
CLPTM1-203ENST00000546079 A6NED7 52 aa10.44□□□□□ -0.74
CLPTM1-203ENST00000546079 MAST4O15021 2626 aa10.44□□□□□ -0.74
CLPTM1-203ENST00000546079 A6NN06 94 aa10.44□□□□□ -0.74
CLPTM1-203ENST00000546079 RPL37AP61513 92 aaKnown RBP10.44□□□□□ -0.74
CLPTM1-203ENST00000546079 REG3GQ6UW15 175 aa10.42□□□□□ -0.74
CLPTM1-203ENST00000546079 COA5Q86WW8 74 aa10.42□□□□□ -0.74
CLPTM1-203ENST00000546079 IGLV7-46A0A075B6I9 117 aa10.41□□□□□ -0.74
CLPTM1-203ENST00000546079 ANK2Q01484 3957 aa10.41□□□□□ -0.74
CLPTM1-203ENST00000546079 CNBPP62633 177 aaKnown RBP10.4□□□□□ -0.74
CLPTM1-203ENST00000546079 CDC42SE1Q9NRR8 79 aa10.4□□□□□ -0.74
CLPTM1-203ENST00000546079 TENM3Q9P273 2699 aa10.4□□□□□ -0.75
CLPTM1-203ENST00000546079 DNAH3Q8TD57 4116 aa10.39□□□□□ -0.75
CLPTM1-203ENST00000546079 BAHCC1Q9P281 2608 aa10.38□□□□□ -0.75
CLPTM1-203ENST00000546079 A8MWP4 228 aa10.38□□□□□ -0.75
CLPTM1-203ENST00000546079 COL6A5A8TX70 2615 aa10.36□□□□□ -0.75
CLPTM1-203ENST00000546079 DNAH10OSP0CZ25 163 aa10.34□□□□□ -0.75
CLPTM1-203ENST00000546079 LINC00472Q9H8W2 130 aa10.34□□□□□ -0.75
CLPTM1-203ENST00000546079 LINC01558Q9Y6Z2 57 aa10.34□□□□□ -0.75
CLPTM1-203ENST00000546079 NOTCH1P46531 2555 aa10.33□□□□□ -0.76
CLPTM1-203ENST00000546079 PLAC8Q9NZF1 115 aa10.33□□□□□ -0.76
CLPTM1-203ENST00000546079 C7orf65Q6ZTY9 151 aa10.31□□□□□ -0.76
CLPTM1-203ENST00000546079 PRLHP81277 87 aa10.28□□□□□ -0.76
CLPTM1-203ENST00000546079 MOBPQ13875 183 aa10.28□□□□□ -0.76
CLPTM1-203ENST00000546079 CASC10Q5T4H9 136 aa10.28□□□□□ -0.76
CLPTM1-203ENST00000546079 C11orf45Q8TAV5 145 aa10.28□□□□□ -0.76
CLPTM1-203ENST00000546079 DEFB131BA0A096LNP1 70 aa10.27□□□□□ -0.77
CLPTM1-203ENST00000546079 MMP24-AS1A0A0U1RRL7 71 aa10.27□□□□□ -0.77
CLPTM1-203ENST00000546079 NBEAL1Q6ZS30 2694 aa10.26□□□□□ -0.77
CLPTM1-203ENST00000546079 SPAG11AQ6PDA7 123 aa10.25□□□□□ -0.77
CLPTM1-203ENST00000546079 K7EIL1 84 aa10.23□□□□□ -0.77
CLPTM1-203ENST00000546079 SPRR1BP22528 89 aa10.23□□□□□ -0.77
CLPTM1-203ENST00000546079 PCOTHQ58A44 107 aa10.23□□□□□ -0.77
CLPTM1-203ENST00000546079 TP53AIP1Q9HCN2 124 aa10.23□□□□□ -0.77
CLPTM1-203ENST00000546079 H0Y9J4 135 aa10.22□□□□□ -0.77
CLPTM1-203ENST00000546079 ASB16-AS1Q495Z4 193 aa10.2□□□□□ -0.78
CLPTM1-203ENST00000546079 SPINK7P58062 85 aa10.19□□□□□ -0.78
CLPTM1-203ENST00000546079 Q6ZR54 194 aa10.19□□□□□ -0.78
CLPTM1-203ENST00000546079 HUWE1Q7Z6Z7 4374 aaKnown RBP10.17□□□□□ -0.78
CLPTM1-203ENST00000546079 MGAM2Q2M2H8 2515 aa10.17□□□□□ -0.78
CLPTM1-203ENST00000546079 HRES1P13985 223 aa10.16□□□□□ -0.78
CLPTM1-203ENST00000546079 IGKV2-24A0A0C4DH68 120 aa10.15□□□□□ -0.78
CLPTM1-203ENST00000546079 A0A096LNI7 61 aa10.14□□□□□ -0.79
CLPTM1-203ENST00000546079 C4orf48Q5BLP8 95 aa10.14□□□□□ -0.79
CLPTM1-203ENST00000546079 Q96NJ1 140 aa10.08□□□□□ -0.8
CLPTM1-203ENST00000546079 MDFIQ99750 246 aa10.08□□□□□ -0.8
CLPTM1-203ENST00000546079 C8orf17Q9NRJ1 99 aa10.08□□□□□ -0.8
CLPTM1-203ENST00000546079 KRTAP11-1Q8IUC1 163 aa10.06□□□□□ -0.8
CLPTM1-203ENST00000546079 DNAH1Q9P2D7 4330 aa10.06□□□□□ -0.8
CLPTM1-203ENST00000546079 C8orf87E5RJ46 101 aa10.05□□□□□ -0.8
CLPTM1-203ENST00000546079 LINC00313P59037 77 aa10.03□□□□□ -0.8
CLPTM1-203ENST00000546079 STAB2Q8WWQ8 2551 aa10.02□□□□□ -0.81
CLPTM1-203ENST00000546079 COL7A1Q02388 2944 aa10.02□□□□□ -0.81
CLPTM1-203ENST00000546079 DNAH9Q9NYC9 4486 aa9.99□□□□□ -0.81
CLPTM1-203ENST00000546079 A0A1B0GVX0 72 aa9.99□□□□□ -0.81
CLPTM1-203ENST00000546079 MRPL34Q9BQ48 92 aaKnown RBP9.99□□□□□ -0.81
CLPTM1-203ENST00000546079 TENM2Q9NT68 2774 aa9.98□□□□□ -0.81
CLPTM1-203ENST00000546079 PRR26Q8N8Z3 221 aa9.98□□□□□ -0.81
CLPTM1-203ENST00000546079 SRRM2Q9UQ35 2752 aaKnown RBP9.98□□□□□ -0.81
CLPTM1-203ENST00000546079 IGHV6-1A0A0B4J1U7 121 aa9.96□□□□□ -0.81
CLPTM1-203ENST00000546079 PLA2G1BP04054 148 aaKnown RBP9.96□□□□□ -0.81
CLPTM1-203ENST00000546079 PRAC1Q96KF2 57 aa9.94□□□□□ -0.82
CLPTM1-203ENST00000546079 CHTF8P0CG12 524 aa9.94□□□□□ -0.82
CLPTM1-203ENST00000546079 KRTAP13-1Q8IUC0 172 aa9.94□□□□□ -0.82
CLPTM1-203ENST00000546079 KRTAP1-5Q9BYS1 174 aa9.93□□□□□ -0.82
CLPTM1-203ENST00000546079 CDK2AP2O75956 126 aa9.91□□□□□ -0.82
CLPTM1-203ENST00000546079 A0A087X002 238 aa9.91□□□□□ -0.82
CLPTM1-203ENST00000546079 ACYP2P14621 99 aa9.91□□□□□ -0.82
CLPTM1-203ENST00000546079 APLNQ9ULZ1 77 aa9.91□□□□□ -0.82
CLPTM1-203ENST00000546079 IGLV9-49A0A0B4J1Y8 123 aa9.9□□□□□ -0.82
CLPTM1-203ENST00000546079 LINC01554Q52M75 96 aa9.88□□□□□ -0.83
CLPTM1-203ENST00000546079 LYSTQ99698 3801 aa9.88□□□□□ -0.83
CLPTM1-203ENST00000546079 NOTCH2NLQ7Z3S9 236 aa9.87□□□□□ -0.83
CLPTM1-203ENST00000546079 ADM2Q7Z4H4 148 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms