RNA–Protein interactions for RNA: ENST00000545913.5

CIT-217, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 8,520 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-217ENST00000545913 PRUNE2Q8WUY3 3088 aa7.42□□□□□ -1.22
CIT-217ENST00000545913 OCR1Q9BZK8 76 aa7.42□□□□□ -1.22
CIT-217ENST00000545913 Q1T7F1 81 aa7.41□□□□□ -1.22
CIT-217ENST00000545913 LUZP6Q538Z0 58 aa7.4□□□□□ -1.22
CIT-217ENST00000545913 DMBT1Q9UGM3 2413 aaPredicted RBP7.4□□□□□ -1.22
CIT-217ENST00000545913 SETXQ7Z333 2677 aaKnown RBP7.4□□□□□ -1.23
CIT-217ENST00000545913 STAB2Q8WWQ8 2551 aa7.38□□□□□ -1.23
CIT-217ENST00000545913 WDFY4Q6ZS81 3184 aa7.38□□□□□ -1.23
CIT-217ENST00000545913 KRTAP1-1Q07627 177 aa7.38□□□□□ -1.23
CIT-217ENST00000545913 Q6ZSA8 131 aa7.38□□□□□ -1.23
CIT-217ENST00000545913 FRYQ5TBA9 3013 aa7.37□□□□□ -1.23
CIT-217ENST00000545913 USP34Q70CQ2 3546 aa7.37□□□□□ -1.23
CIT-217ENST00000545913 FAM229BQ4G0N7 80 aa7.36□□□□□ -1.23
CIT-217ENST00000545913 CHD9Q3L8U1 2897 aa7.35□□□□□ -1.23
CIT-217ENST00000545913 BRCA2P51587 3418 aa7.35□□□□□ -1.23
CIT-217ENST00000545913 IGLV7-46A0A075B6I9 117 aa7.34□□□□□ -1.23
CIT-217ENST00000545913 HTTP42858 3142 aa7.33□□□□□ -1.24
CIT-217ENST00000545913 DSPP15924 2871 aaKnown RBP7.33□□□□□ -1.24
CIT-217ENST00000545913 CELSR3Q9NYQ7 3312 aa7.33□□□□□ -1.24
CIT-217ENST00000545913 TNP2Q05952 138 aa7.33□□□□□ -1.24
CIT-217ENST00000545913 A0A1B0GU33 70 aa7.31□□□□□ -1.24
CIT-217ENST00000545913 PRR26Q8N8Z3 221 aa7.31□□□□□ -1.24
CIT-217ENST00000545913 NBEAL2Q6ZNJ1 2754 aa7.3□□□□□ -1.24
CIT-217ENST00000545913 WIPF1O43516 503 aa7.3□□□□□ -1.24
CIT-217ENST00000545913 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.3□□□□□ -1.24
CIT-217ENST00000545913 Q75L30 129 aa7.29□□□□□ -1.24
CIT-217ENST00000545913 APCP25054 2843 aa7.29□□□□□ -1.24
CIT-217ENST00000545913 LINC00483Q53H64 154 aa7.29□□□□□ -1.24
CIT-217ENST00000545913 CAMK2N1Q7Z7J9 78 aa7.29□□□□□ -1.24
CIT-217ENST00000545913 HRES1P13985 223 aa7.28□□□□□ -1.24
CIT-217ENST00000545913 PLAC8Q9NZF1 115 aa7.26□□□□□ -1.25
CIT-217ENST00000545913 M0R2T5 61 aa7.24□□□□□ -1.25
CIT-217ENST00000545913 FREM2Q5SZK8 3169 aa7.24□□□□□ -1.25
CIT-217ENST00000545913 ZCCHC13Q8WW36 166 aaKnown RBP7.24□□□□□ -1.25
CIT-217ENST00000545913 BAHCC1Q9P281 2608 aa7.23□□□□□ -1.25
CIT-217ENST00000545913 S4R3F8 94 aa7.22□□□□□ -1.25
CIT-217ENST00000545913 KALRNO60229 2985 aa7.22□□□□□ -1.25
CIT-217ENST00000545913 DMAC1Q96GE9 116 aa7.22□□□□□ -1.25
CIT-217ENST00000545913 FRYLO94915 3013 aa7.22□□□□□ -1.25
CIT-217ENST00000545913 SPRR1AP35321 89 aa7.22□□□□□ -1.25
CIT-217ENST00000545913 MMP24-AS1A0A0U1RRL7 71 aa7.21□□□□□ -1.26
CIT-217ENST00000545913 CSAG1Q6PB30 78 aa7.2□□□□□ -1.26
CIT-217ENST00000545913 CDH23Q9H251 3354 aa7.2□□□□□ -1.26
CIT-217ENST00000545913 IGSF10Q6WRI0 2623 aa7.18□□□□□ -1.26
CIT-217ENST00000545913 NSD1Q96L73 2696 aaPredicted RBP7.18□□□□□ -1.26
CIT-217ENST00000545913 UBR5O95071 2799 aaPredicted RBP7.17□□□□□ -1.26
CIT-217ENST00000545913 LAMA1P25391 3075 aa7.17□□□□□ -1.26
CIT-217ENST00000545913 LINC01558Q9Y6Z2 57 aa7.17□□□□□ -1.26
CIT-217ENST00000545913 UTP20O75691 2785 aaKnown RBP7.16□□□□□ -1.26
CIT-217ENST00000545913 Q8N9P0 234 aaPredicted RBP7.15□□□□□ -1.26
CIT-217ENST00000545913 LRBAP50851 2863 aa7.15□□□□□ -1.26
CIT-217ENST00000545913 LINC00472Q9H8W2 130 aa7.15□□□□□ -1.26
CIT-217ENST00000545913 REV3LO60673 3130 aa7.15□□□□□ -1.27
CIT-217ENST00000545913 Q5W150 140 aa7.14□□□□□ -1.27
CIT-217ENST00000545913 SPRR1BP22528 89 aa7.14□□□□□ -1.27
CIT-217ENST00000545913 UNC80Q8N2C7 3258 aa7.14□□□□□ -1.27
CIT-217ENST00000545913 Q8NDZ9 215 aa7.12□□□□□ -1.27
CIT-217ENST00000545913 R4GN34 69 aa7.1□□□□□ -1.27
CIT-217ENST00000545913 SEC61BP60468 96 aaKnown RBP7.1□□□□□ -1.27
CIT-217ENST00000545913 ITPR1Q14643 2758 aa7.09□□□□□ -1.27
CIT-217ENST00000545913 SPINK7P58062 85 aa7.09□□□□□ -1.27
CIT-217ENST00000545913 Q5VV11 94 aa7.06□□□□□ -1.28
CIT-217ENST00000545913 Q5XG85 94 aa7.06□□□□□ -1.28
CIT-217ENST00000545913 FP248Q71RG6 208 aaPredicted RBP7.05□□□□□ -1.28
CIT-217ENST00000545913 WDFY3Q8IZQ1 3526 aa7.04□□□□□ -1.28
CIT-217ENST00000545913 DMXL2Q8TDJ6 3036 aa7.03□□□□□ -1.28
CIT-217ENST00000545913 SPTBN5Q9NRC6 3674 aaKnown RBP7.03□□□□□ -1.28
CIT-217ENST00000545913 ASH1LQ9NR48 2969 aaKnown RBP7.03□□□□□ -1.28
CIT-217ENST00000545913 VCANP13611 3396 aa7.03□□□□□ -1.28
CIT-217ENST00000545913 Q5VSD8 79 aa7.02□□□□□ -1.29
CIT-217ENST00000545913 KRTAP1-5Q9BYS1 174 aa7.01□□□□□ -1.29
CIT-217ENST00000545913 CYSTM1Q9H1C7 97 aa7.01□□□□□ -1.29
CIT-217ENST00000545913 COL6A3P12111 3177 aa7□□□□□ -1.29
CIT-217ENST00000545913 BOD1L1Q8NFC6 3051 aa7□□□□□ -1.29
CIT-217ENST00000545913 FLNCQ14315 2725 aa6.99□□□□□ -1.29
CIT-217ENST00000545913 KRTAP26-1Q6PEX3 210 aa6.99□□□□□ -1.29
CIT-217ENST00000545913 RPL37P61927 97 aaKnown RBP6.99□□□□□ -1.29
CIT-217ENST00000545913 NBEAQ8NFP9 2946 aa6.99□□□□□ -1.29
CIT-217ENST00000545913 TACC2O95359 2948 aa6.98□□□□□ -1.29
CIT-217ENST00000545913 A0A0A0MQY5 61 aa6.98□□□□□ -1.29
CIT-217ENST00000545913 CRYBG3Q68DQ2 2970 aa6.98□□□□□ -1.29
CIT-217ENST00000545913 ROMO1P60602 79 aa6.97□□□□□ -1.29
CIT-217ENST00000545913 Q6ZR54 194 aa6.97□□□□□ -1.29
CIT-217ENST00000545913 PRAC1Q96KF2 57 aa6.95□□□□□ -1.3
CIT-217ENST00000545913 KRTAP10-1P60331 282 aa6.94□□□□□ -1.3
CIT-217ENST00000545913 H1FX-AS1Q4G0G2 97 aa6.93□□□□□ -1.3
CIT-217ENST00000545913 MYO15AQ9UKN7 3530 aa6.93□□□□□ -1.3
CIT-217ENST00000545913 LCE6AA0A183 80 aa6.93□□□□□ -1.3
CIT-217ENST00000545913 ADGRG4Q8IZF6 3080 aa6.92□□□□□ -1.3
CIT-217ENST00000545913 ZZEF1O43149 2961 aa6.92□□□□□ -1.3
CIT-217ENST00000545913 M0QZ58 72 aa6.92□□□□□ -1.3
CIT-217ENST00000545913 COL12A1Q99715 3063 aa6.92□□□□□ -1.3
CIT-217ENST00000545913 KRTAP10-2P60368 255 aa6.91□□□□□ -1.3
CIT-217ENST00000545913 KRTAP4-16G5E9R7 235 aaPredicted RBP6.91□□□□□ -1.3
CIT-217ENST00000545913 SZT2Q5T011 3432 aa6.9□□□□□ -1.3
CIT-217ENST00000545913 CELSR2Q9HCU4 2923 aa6.89□□□□□ -1.31
CIT-217ENST00000545913 HIVEP1P15822 2718 aa6.89□□□□□ -1.31
CIT-217ENST00000545913 ASB16-AS1Q495Z4 193 aa6.88□□□□□ -1.31
CIT-217ENST00000545913 OXTP01178 125 aa6.87□□□□□ -1.31
CIT-217ENST00000545913 SPEGQ15772 3267 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms