RNA–Protein interactions for RNA: ENST00000545908.5

MTHFD1-202, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2 BASIC

Gene MTHFD1, Length 6,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-202ENST00000545908 ITPR3Q14573 2671 aa5.5□□□□□ -1.53
MTHFD1-202ENST00000545908 EPG5Q9HCE0 2579 aa5.5□□□□□ -1.53
MTHFD1-202ENST00000545908 TNRC18O15417 2968 aaPredicted RBP5.5□□□□□ -1.53
MTHFD1-202ENST00000545908 SPRR1AP35321 89 aa5.5□□□□□ -1.53
MTHFD1-202ENST00000545908 SZT2Q5T011 3432 aa5.49□□□□□ -1.53
MTHFD1-202ENST00000545908 Q6ZR54 194 aa5.49□□□□□ -1.53
MTHFD1-202ENST00000545908 SEC61BP60468 96 aaKnown RBP5.48□□□□□ -1.53
MTHFD1-202ENST00000545908 AKAP13Q12802 2813 aa5.47□□□□□ -1.53
MTHFD1-202ENST00000545908 OXTP01178 125 aa5.47□□□□□ -1.53
MTHFD1-202ENST00000545908 ZCCHC13Q8WW36 166 aaKnown RBP5.47□□□□□ -1.53
MTHFD1-202ENST00000545908 SETD2Q9BYW2 2564 aaPredicted RBP5.47□□□□□ -1.53
MTHFD1-202ENST00000545908 DNAH14Q0VDD8 3507 aa5.47□□□□□ -1.53
MTHFD1-202ENST00000545908 H7BZZ5 65 aa5.47□□□□□ -1.53
MTHFD1-202ENST00000545908 ROMO1P60602 79 aa5.46□□□□□ -1.53
MTHFD1-202ENST00000545908 HELZ2Q9BYK8 2649 aaKnown RBP5.46□□□□□ -1.54
MTHFD1-202ENST00000545908 S4R3F8 94 aa5.46□□□□□ -1.54
MTHFD1-202ENST00000545908 A0A1B0GU33 70 aa5.46□□□□□ -1.54
MTHFD1-202ENST00000545908 UNC80Q8N2C7 3258 aa5.44□□□□□ -1.54
MTHFD1-202ENST00000545908 SPRR1BP22528 89 aa5.42□□□□□ -1.54
MTHFD1-202ENST00000545908 KLKP1Q107X0 134 aa5.42□□□□□ -1.54
MTHFD1-202ENST00000545908 PANO1I0J062 215 aa5.42□□□□□ -1.54
MTHFD1-202ENST00000545908 SPANXA2-OT1Q8N9U9 137 aa5.42□□□□□ -1.54
MTHFD1-202ENST00000545908 MGAQ8IWI9 3026 aa5.41□□□□□ -1.54
MTHFD1-202ENST00000545908 USP24Q9UPU5 2620 aa5.4□□□□□ -1.55
MTHFD1-202ENST00000545908 MMP24-AS1A0A0U1RRL7 71 aa5.4□□□□□ -1.55
MTHFD1-202ENST00000545908 CFAP46Q8IYW2 2715 aa5.4□□□□□ -1.55
MTHFD1-202ENST00000545908 Q8N9P0 234 aaPredicted RBP5.39□□□□□ -1.55
MTHFD1-202ENST00000545908 C20orf166-AS1Q96NR2 134 aa5.39□□□□□ -1.55
MTHFD1-202ENST00000545908 NDUFAF8A1L188 74 aa5.39□□□□□ -1.55
MTHFD1-202ENST00000545908 FP248Q71RG6 208 aaPredicted RBP5.39□□□□□ -1.55
MTHFD1-202ENST00000545908 HRES1P13985 223 aa5.38□□□□□ -1.55
MTHFD1-202ENST00000545908 PRRC2CQ9Y520 2896 aaKnown RBP5.37□□□□□ -1.55
MTHFD1-202ENST00000545908 COL6A3P12111 3177 aa5.36□□□□□ -1.55
MTHFD1-202ENST00000545908 OCR1Q9BZK8 76 aa5.36□□□□□ -1.55
MTHFD1-202ENST00000545908 TRIOO75962 3097 aa5.36□□□□□ -1.55
MTHFD1-202ENST00000545908 Q6ZRN7 208 aaPredicted RBP5.36□□□□□ -1.55
MTHFD1-202ENST00000545908 ZNF292O60281 2723 aa5.35□□□□□ -1.55
MTHFD1-202ENST00000545908 LINC00472Q9H8W2 130 aa5.35□□□□□ -1.55
MTHFD1-202ENST00000545908 Q5W150 140 aa5.34□□□□□ -1.55
MTHFD1-202ENST00000545908 Q75L30 129 aa5.34□□□□□ -1.55
MTHFD1-202ENST00000545908 LINC01558Q9Y6Z2 57 aa5.33□□□□□ -1.56
MTHFD1-202ENST00000545908 CELSR3Q9NYQ7 3312 aa5.33□□□□□ -1.56
MTHFD1-202ENST00000545908 A0A087X002 238 aa5.32□□□□□ -1.56
MTHFD1-202ENST00000545908 LAMA2P24043 3122 aaKnown RBP5.3□□□□□ -1.56
MTHFD1-202ENST00000545908 CFAP54Q96N23 3096 aa5.29□□□□□ -1.56
MTHFD1-202ENST00000545908 KRTAP4-16G5E9R7 235 aaPredicted RBP5.28□□□□□ -1.56
MTHFD1-202ENST00000545908 WDFY4Q6ZS81 3184 aa5.28□□□□□ -1.56
MTHFD1-202ENST00000545908 USP34Q70CQ2 3546 aa5.27□□□□□ -1.57
MTHFD1-202ENST00000545908 KMT2BQ9UMN6 2715 aaPredicted RBP5.27□□□□□ -1.57
MTHFD1-202ENST00000545908 BAHCC1Q9P281 2608 aa5.27□□□□□ -1.57
MTHFD1-202ENST00000545908 KRTAP11-1Q8IUC1 163 aa5.26□□□□□ -1.57
MTHFD1-202ENST00000545908 LAMA1P25391 3075 aa5.26□□□□□ -1.57
MTHFD1-202ENST00000545908 Q5XG85 94 aa5.26□□□□□ -1.57
MTHFD1-202ENST00000545908 R4GN34 69 aa5.26□□□□□ -1.57
MTHFD1-202ENST00000545908 FLNBO75369 2602 aaKnown RBP5.25□□□□□ -1.57
MTHFD1-202ENST00000545908 IGSF10Q6WRI0 2623 aa5.25□□□□□ -1.57
MTHFD1-202ENST00000545908 ATRQ13535 2644 aa5.24□□□□□ -1.57
MTHFD1-202ENST00000545908 Q5VV11 94 aa5.24□□□□□ -1.57
MTHFD1-202ENST00000545908 RPS29P62273 56 aaKnown RBP5.24□□□□□ -1.57
MTHFD1-202ENST00000545908 VCANP13611 3396 aa5.23□□□□□ -1.57
MTHFD1-202ENST00000545908 EYSQ5T1H1 3165 aa5.2□□□□□ -1.58
MTHFD1-202ENST00000545908 RPL37P61927 97 aaKnown RBP5.19□□□□□ -1.58
MTHFD1-202ENST00000545908 VPS13AQ96RL7 3174 aa5.19□□□□□ -1.58
MTHFD1-202ENST00000545908 KRTAP7-1Q8IUC3 87 aa5.18□□□□□ -1.58
MTHFD1-202ENST00000545908 MGAM2Q2M2H8 2515 aa5.18□□□□□ -1.58
MTHFD1-202ENST00000545908 MAST4O15021 2626 aa5.18□□□□□ -1.58
MTHFD1-202ENST00000545908 REV3LO60673 3130 aa5.18□□□□□ -1.58
MTHFD1-202ENST00000545908 SPATA8Q6RVD6 105 aa5.17□□□□□ -1.58
MTHFD1-202ENST00000545908 ASB16-AS1Q495Z4 193 aa5.17□□□□□ -1.58
MTHFD1-202ENST00000545908 C10orf95Q9H7T3 257 aa5.17□□□□□ -1.58
MTHFD1-202ENST00000545908 M0QZ58 72 aa5.16□□□□□ -1.58
MTHFD1-202ENST00000545908 KRTAP13-2Q52LG2 175 aa5.16□□□□□ -1.58
MTHFD1-202ENST00000545908 ADM2Q7Z4H4 148 aa5.16□□□□□ -1.58
MTHFD1-202ENST00000545908 DSPP15924 2871 aaKnown RBP5.16□□□□□ -1.58
MTHFD1-202ENST00000545908 FREM2Q5SZK8 3169 aa5.13□□□□□ -1.59
MTHFD1-202ENST00000545908 KRTAP13-1Q8IUC0 172 aa5.13□□□□□ -1.59
MTHFD1-202ENST00000545908 ITPR2Q14571 2701 aa5.13□□□□□ -1.59
MTHFD1-202ENST00000545908 TEX15Q9BXT5 2789 aa5.12□□□□□ -1.59
MTHFD1-202ENST00000545908 NOTCH2NLQ7Z3S9 236 aa5.11□□□□□ -1.59
MTHFD1-202ENST00000545908 TEP1Q99973 2627 aaKnown RBP5.1□□□□□ -1.59
MTHFD1-202ENST00000545908 LRBAP50851 2863 aa5.1□□□□□ -1.59
MTHFD1-202ENST00000545908 KRTAP25-1Q3LHN0 102 aa5.1□□□□□ -1.59
MTHFD1-202ENST00000545908 CYSTM1Q9H1C7 97 aa5.09□□□□□ -1.59
MTHFD1-202ENST00000545908 A0A0C4DFX4 3053 aa5.08□□□□□ -1.6
MTHFD1-202ENST00000545908 FRYQ5TBA9 3013 aa5.07□□□□□ -1.6
MTHFD1-202ENST00000545908 KRTAP29-1A8MX34 341 aaPredicted RBP5.07□□□□□ -1.6
MTHFD1-202ENST00000545908 MYO15AQ9UKN7 3530 aa5.06□□□□□ -1.6
MTHFD1-202ENST00000545908 DMXL2Q8TDJ6 3036 aa5.06□□□□□ -1.6
MTHFD1-202ENST00000545908 CHD6Q8TD26 2715 aa5.05□□□□□ -1.6
MTHFD1-202ENST00000545908 UTP20O75691 2785 aaKnown RBP5.05□□□□□ -1.6
MTHFD1-202ENST00000545908 DMXL1Q9Y485 3027 aa5.05□□□□□ -1.6
MTHFD1-202ENST00000545908 ASPMQ8IZT6 3477 aa5.04□□□□□ -1.6
MTHFD1-202ENST00000545908 UNC79Q9P2D8 2635 aa5.04□□□□□ -1.6
MTHFD1-202ENST00000545908 SETXQ7Z333 2677 aaKnown RBP5.03□□□□□ -1.6
MTHFD1-202ENST00000545908 BOD1L1Q8NFC6 3051 aa5.02□□□□□ -1.61
MTHFD1-202ENST00000545908 P0C880 135 aa5.01□□□□□ -1.61
MTHFD1-202ENST00000545908 CENPEQ02224 2701 aa5.01□□□□□ -1.61
MTHFD1-202ENST00000545908 SPEGQ15772 3267 aa5.01□□□□□ -1.61
MTHFD1-202ENST00000545908 A8MUU9 505 aa5□□□□□ -1.61
MTHFD1-202ENST00000545908 FRYLO94915 3013 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms