RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 hADV29S1A0JD25 119 aa11.32□□□□□ -0.6
SCARB1-210ENST00000545493 RPL37P61927 97 aaKnown RBP11.32□□□□□ -0.6
SCARB1-210ENST00000545493 MT1HP80294 61 aa11.31□□□□□ -0.6
SCARB1-210ENST00000545493 FLGP20930 4061 aaPredicted RBP11.31□□□□□ -0.6
SCARB1-210ENST00000545493 TCL1BO95988 128 aa11.3□□□□□ -0.6
SCARB1-210ENST00000545493 CLEC2BQ92478 149 aa11.29□□□□□ -0.6
SCARB1-210ENST00000545493 IGFL1Q6UW32 110 aa11.28□□□□□ -0.6
SCARB1-210ENST00000545493 LCE2DQ5TA82 110 aaPredicted RBP11.27□□□□□ -0.61
SCARB1-210ENST00000545493 COX8AP10176 69 aa11.26□□□□□ -0.61
SCARB1-210ENST00000545493 Q6JHZ5 121 aa11.26□□□□□ -0.61
SCARB1-210ENST00000545493 HIST1H4GQ99525 98 aa11.26□□□□□ -0.61
SCARB1-210ENST00000545493 TRBV7-7A0A0K0K1E9 115 aa11.25□□□□□ -0.61
SCARB1-210ENST00000545493 SCGB1D1O95968 90 aa11.25□□□□□ -0.61
SCARB1-210ENST00000545493 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.25□□□□□ -0.61
SCARB1-210ENST00000545493 BVES-AS1Q5T3Y7 98 aa11.23□□□□□ -0.61
SCARB1-210ENST00000545493 OCIAD2Q56VL3 154 aa11.21□□□□□ -0.61
SCARB1-210ENST00000545493 TMA7Q9Y2S6 64 aaKnown RBP11.21□□□□□ -0.61
SCARB1-210ENST00000545493 DLEU1O43261 78 aa11.2□□□□□ -0.62
SCARB1-210ENST00000545493 PPDPFLQ8WWR9 84 aa11.2□□□□□ -0.62
SCARB1-210ENST00000545493 H3BUT2 72 aa11.18□□□□□ -0.62
SCARB1-210ENST00000545493 CFC1BP0CG36 223 aa11.17□□□□□ -0.62
SCARB1-210ENST00000545493 CFC1P0CG37 223 aa11.17□□□□□ -0.62
SCARB1-210ENST00000545493 FSIP2Q5CZC0 6907 aa11.15□□□□□ -0.62
SCARB1-210ENST00000545493 C14orf144Q96I85 54 aa11.15□□□□□ -0.62
SCARB1-210ENST00000545493 C2orf91Q6ZV80 131 aa11.13□□□□□ -0.63
SCARB1-210ENST00000545493 FAM218AQ96MZ4 157 aa11.13□□□□□ -0.63
SCARB1-210ENST00000545493 SNHG12Q9BXW3 62 aa11.13□□□□□ -0.63
SCARB1-210ENST00000545493 PAM16Q9Y3D7 125 aa11.13□□□□□ -0.63
SCARB1-210ENST00000545493 A0A0B4J2C4 111 aa11.12□□□□□ -0.63
SCARB1-210ENST00000545493 LORP23490 312 aaPredicted RBP11.12□□□□□ -0.63
SCARB1-210ENST00000545493 SPATA45Q537H7 98 aa11.12□□□□□ -0.63
SCARB1-210ENST00000545493 RAB37Q96AX2 223 aa11.12□□□□□ -0.63
SCARB1-210ENST00000545493 HIGD1BQ9P298 99 aa11.12□□□□□ -0.63
SCARB1-210ENST00000545493 OBSCN-AS1Q96MR7 158 aa11.11□□□□□ -0.63
SCARB1-210ENST00000545493 KRTAP10-6P60371 365 aaPredicted RBP11.1□□□□□ -0.63
SCARB1-210ENST00000545493 LST1O00453 97 aa11.07□□□□□ -0.64
SCARB1-210ENST00000545493 Q6Q795 121 aa11.07□□□□□ -0.64
SCARB1-210ENST00000545493 Q75L30 129 aa11.07□□□□□ -0.64
SCARB1-210ENST00000545493 COX6B2Q6YFQ2 88 aa11.06□□□□□ -0.64
SCARB1-210ENST00000545493 H0YGX0 51 aa11.05□□□□□ -0.64
SCARB1-210ENST00000545493 VAMP8Q9BV40 100 aa11.05□□□□□ -0.64
SCARB1-210ENST00000545493 PYY3Q5JQD4 70 aa11.04□□□□□ -0.64
SCARB1-210ENST00000545493 CEND1Q8N111 149 aa11.03□□□□□ -0.64
SCARB1-210ENST00000545493 CRCT1Q9UGL9 99 aa11.03□□□□□ -0.64
SCARB1-210ENST00000545493 SS18L2Q9UHA2 77 aa11.03□□□□□ -0.64
SCARB1-210ENST00000545493 NDUFV3P56181 108 aaKnown RBP11.02□□□□□ -0.65
SCARB1-210ENST00000545493 TEN1Q86WV5 123 aa11.01□□□□□ -0.65
SCARB1-210ENST00000545493 FXYD2P54710 66 aa11□□□□□ -0.65
SCARB1-210ENST00000545493 A0A087WSZ3 146 aa10.99□□□□□ -0.65
SCARB1-210ENST00000545493 M0R2T5 61 aa10.99□□□□□ -0.65
SCARB1-210ENST00000545493 SNCGO76070 127 aa10.99□□□□□ -0.65
SCARB1-210ENST00000545493 ATP11AUNQ6ZP68 121 aa10.99□□□□□ -0.65
SCARB1-210ENST00000545493 A0A1B0GX51 115 aa10.98□□□□□ -0.65
SCARB1-210ENST00000545493 Q96NJ1 140 aa10.98□□□□□ -0.65
SCARB1-210ENST00000545493 PRO1854Q9UHT4 67 aa10.97□□□□□ -0.65
SCARB1-210ENST00000545493 TMEM238LA0A1B0GVL6 79 aa10.96□□□□□ -0.65
SCARB1-210ENST00000545493 A6NJY4 79 aa10.96□□□□□ -0.65
SCARB1-210ENST00000545493 TRIAP1O43715 76 aa10.96□□□□□ -0.65
SCARB1-210ENST00000545493 H3BMG7 143 aa10.95□□□□□ -0.66
SCARB1-210ENST00000545493 C20orf166-AS1Q96NR2 134 aa10.95□□□□□ -0.66
SCARB1-210ENST00000545493 FABP2P12104 132 aa10.93□□□□□ -0.66
SCARB1-210ENST00000545493 A0A1W2PNM2 257 aa10.92□□□□□ -0.66
SCARB1-210ENST00000545493 A8MUU9 505 aa10.92□□□□□ -0.66
SCARB1-210ENST00000545493 GHRHP01286 108 aa10.89□□□□□ -0.67
SCARB1-210ENST00000545493 K7ERJ3 54 aa10.88□□□□□ -0.67
SCARB1-210ENST00000545493 DSCR10P59022 87 aa10.87□□□□□ -0.67
SCARB1-210ENST00000545493 SIGMAR1Q99720 223 aa10.86□□□□□ -0.67
SCARB1-210ENST00000545493 A0A1B0GV72 72 aa10.85□□□□□ -0.67
SCARB1-210ENST00000545493 LOC105371267A0A1B0GV96 52 aa10.85□□□□□ -0.67
SCARB1-210ENST00000545493 HSD52Q0P140 79 aa10.85□□□□□ -0.67
SCARB1-210ENST00000545493 ORMDL1Q9P0S3 153 aa10.83□□□□□ -0.68
SCARB1-210ENST00000545493 DNAL4O96015 105 aa10.82□□□□□ -0.68
SCARB1-210ENST00000545493 TRBV7-4A0A0J9YYF1 115 aa10.8□□□□□ -0.68
SCARB1-210ENST00000545493 ANKRD29Q8N6D5 301 aa10.8□□□□□ -0.68
SCARB1-210ENST00000545493 KRTAP16-1A8MUX0 517 aa10.79□□□□□ -0.68
SCARB1-210ENST00000545493 PSMB2P49721 201 aa10.79□□□□□ -0.68
SCARB1-210ENST00000545493 SMIM6P0DI80 62 aa10.78□□□□□ -0.68
SCARB1-210ENST00000545493 IGKV4-1P06312 121 aa10.76□□□□□ -0.69
SCARB1-210ENST00000545493 UQCR10Q9UDW1 63 aa10.76□□□□□ -0.69
SCARB1-210ENST00000545493 H3BQ85 93 aa10.75□□□□□ -0.69
SCARB1-210ENST00000545493 TMEM256-PLSCR3K7ERE1 68 aa10.74□□□□□ -0.69
SCARB1-210ENST00000545493 COX6CP09669 75 aa10.73□□□□□ -0.69
SCARB1-210ENST00000545493 LINC00313P59037 77 aa10.73□□□□□ -0.69
SCARB1-210ENST00000545493 NOTCH2NLQ7Z3S9 236 aa10.73□□□□□ -0.69
SCARB1-210ENST00000545493 LINC00472Q9H8W2 130 aa10.73□□□□□ -0.69
SCARB1-210ENST00000545493 CCKP06307 115 aa10.72□□□□□ -0.69
SCARB1-210ENST00000545493 TRBV20-1A0A075B6N2 111 aa10.71□□□□□ -0.69
SCARB1-210ENST00000545493 DEFB116Q30KQ4 102 aa10.71□□□□□ -0.69
SCARB1-210ENST00000545493 TRACP01848 142 aa10.7□□□□□ -0.7
SCARB1-210ENST00000545493 UBE2V1Q13404 147 aa10.7□□□□□ -0.7
SCARB1-210ENST00000545493 USH2AO75445 5202 aa10.69□□□□□ -0.7
SCARB1-210ENST00000545493 SSPOA2VEC9 5147 aa10.67□□□□□ -0.7
SCARB1-210ENST00000545493 KRTAP9-8Q9BYQ0 159 aa10.66□□□□□ -0.7
SCARB1-210ENST00000545493 IGHV6-1A0A0B4J1U7 121 aa10.65□□□□□ -0.7
SCARB1-210ENST00000545493 HRES1P13985 223 aa10.62□□□□□ -0.71
SCARB1-210ENST00000545493 VPS25Q9BRG1 176 aa10.62□□□□□ -0.71
SCARB1-210ENST00000545493 MPLKIPQ8TAP9 179 aa10.61□□□□□ -0.71
SCARB1-210ENST00000545493 RBM3P98179 157 aaKnown RBP10.59□□□□□ -0.71
SCARB1-210ENST00000545493 A0A1B0GVX0 72 aa10.58□□□□□ -0.72
SCARB1-210ENST00000545493 SCGB1C2P0DMR2 95 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms