RNA–Protein interactions for RNA: ENST00000545377.5

ARHGEF28-214, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ARHGEF28, Length 6,351 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-214ENST00000545377 HELZ2Q9BYK8 2649 aaKnown RBP10.34□□□□□ -0.75
ARHGEF28-214ENST00000545377 H1FX-AS1Q4G0G2 97 aa10.33□□□□□ -0.76
ARHGEF28-214ENST00000545377 Q75L30 129 aa10.33□□□□□ -0.76
ARHGEF28-214ENST00000545377 LINC00472Q9H8W2 130 aa10.31□□□□□ -0.76
ARHGEF28-214ENST00000545377 FP248Q71RG6 208 aaPredicted RBP10.31□□□□□ -0.76
ARHGEF28-214ENST00000545377 LINC01558Q9Y6Z2 57 aa10.28□□□□□ -0.76
ARHGEF28-214ENST00000545377 PRAC1Q96KF2 57 aa10.28□□□□□ -0.76
ARHGEF28-214ENST00000545377 FLG2Q5D862 2391 aaPredicted RBP10.28□□□□□ -0.76
ARHGEF28-214ENST00000545377 SPRR1BP22528 89 aa10.27□□□□□ -0.76
ARHGEF28-214ENST00000545377 RPL37P61927 97 aaKnown RBP10.26□□□□□ -0.77
ARHGEF28-214ENST00000545377 A0A0A0MQY5 61 aa10.24□□□□□ -0.77
ARHGEF28-214ENST00000545377 KRTAP26-1Q6PEX3 210 aa10.23□□□□□ -0.77
ARHGEF28-214ENST00000545377 PANO1I0J062 215 aa10.22□□□□□ -0.77
ARHGEF28-214ENST00000545377 STAB1Q9NY15 2570 aa10.22□□□□□ -0.77
ARHGEF28-214ENST00000545377 ROMO1P60602 79 aa10.19□□□□□ -0.78
ARHGEF28-214ENST00000545377 A0A087X002 238 aa10.17□□□□□ -0.78
ARHGEF28-214ENST00000545377 SPATA8Q6RVD6 105 aa10.17□□□□□ -0.78
ARHGEF28-214ENST00000545377 Q6ZR54 194 aa10.17□□□□□ -0.78
ARHGEF28-214ENST00000545377 PRRC2CQ9Y520 2896 aaKnown RBP10.17□□□□□ -0.78
ARHGEF28-214ENST00000545377 CEP350Q5VT06 3117 aa10.17□□□□□ -0.78
ARHGEF28-214ENST00000545377 CFAP46Q8IYW2 2715 aa10.16□□□□□ -0.78
ARHGEF28-214ENST00000545377 C5orf42Q9H799 3197 aa10.09□□□□□ -0.79
ARHGEF28-214ENST00000545377 DNAH12Q6ZR08 3092 aa10.08□□□□□ -0.8
ARHGEF28-214ENST00000545377 Q5VV11 94 aa10.06□□□□□ -0.8
ARHGEF28-214ENST00000545377 C20orf166-AS1Q96NR2 134 aa10.01□□□□□ -0.81
ARHGEF28-214ENST00000545377 SETXQ7Z333 2677 aaKnown RBP10□□□□□ -0.81
ARHGEF28-214ENST00000545377 A8MUU9 505 aa9.98□□□□□ -0.81
ARHGEF28-214ENST00000545377 UTRNP46939 3433 aa9.98□□□□□ -0.81
ARHGEF28-214ENST00000545377 TEX15Q9BXT5 2789 aa9.97□□□□□ -0.81
ARHGEF28-214ENST00000545377 CYSTM1Q9H1C7 97 aa9.96□□□□□ -0.81
ARHGEF28-214ENST00000545377 TEP1Q99973 2627 aaKnown RBP9.94□□□□□ -0.82
ARHGEF28-214ENST00000545377 NOTCH2NLQ7Z3S9 236 aa9.92□□□□□ -0.82
ARHGEF28-214ENST00000545377 NBEAL1Q6ZS30 2694 aa9.91□□□□□ -0.82
ARHGEF28-214ENST00000545377 AKAP13Q12802 2813 aa9.88□□□□□ -0.83
ARHGEF28-214ENST00000545377 Q5XG85 94 aa9.87□□□□□ -0.83
ARHGEF28-214ENST00000545377 KRTAP4-16G5E9R7 235 aaPredicted RBP9.85□□□□□ -0.83
ARHGEF28-214ENST00000545377 KRTAP11-1Q8IUC1 163 aa9.85□□□□□ -0.83
ARHGEF28-214ENST00000545377 DMBT1Q9UGM3 2413 aaPredicted RBP9.84□□□□□ -0.83
ARHGEF28-214ENST00000545377 H3BS24 57 aa9.84□□□□□ -0.83
ARHGEF28-214ENST00000545377 CHD6Q8TD26 2715 aa9.82□□□□□ -0.84
ARHGEF28-214ENST00000545377 A8MU10 97 aa9.8□□□□□ -0.84
ARHGEF28-214ENST00000545377 RPS29P62273 56 aaKnown RBP9.78□□□□□ -0.84
ARHGEF28-214ENST00000545377 Q6ZRN7 208 aaPredicted RBP9.78□□□□□ -0.84
ARHGEF28-214ENST00000545377 BAHCC1Q9P281 2608 aa9.78□□□□□ -0.84
ARHGEF28-214ENST00000545377 CENPEQ02224 2701 aa9.75□□□□□ -0.85
ARHGEF28-214ENST00000545377 KRTAP13-2Q52LG2 175 aa9.74□□□□□ -0.85
ARHGEF28-214ENST00000545377 KRTAP29-1A8MX34 341 aaPredicted RBP9.74□□□□□ -0.85
ARHGEF28-214ENST00000545377 UNC79Q9P2D8 2635 aa9.73□□□□□ -0.85
ARHGEF28-214ENST00000545377 COL6A5A8TX70 2615 aa9.72□□□□□ -0.85
ARHGEF28-214ENST00000545377 A0A1B0GVY2 172 aa9.69□□□□□ -0.86
ARHGEF28-214ENST00000545377 STAB2Q8WWQ8 2551 aa9.69□□□□□ -0.86
ARHGEF28-214ENST00000545377 ASB16-AS1Q495Z4 193 aa9.68□□□□□ -0.86
ARHGEF28-214ENST00000545377 TNP1P09430 55 aa9.66□□□□□ -0.86
ARHGEF28-214ENST00000545377 CHD7Q9P2D1 2997 aa9.61□□□□□ -0.87
ARHGEF28-214ENST00000545377 KRTAP10-8P60410 259 aa9.6□□□□□ -0.87
ARHGEF28-214ENST00000545377 KRTAP21-3Q3LHN1 58 aa9.6□□□□□ -0.87
ARHGEF28-214ENST00000545377 A0A0C4DFX4 3053 aa9.59□□□□□ -0.87
ARHGEF28-214ENST00000545377 MGAQ8IWI9 3026 aa9.59□□□□□ -0.87
ARHGEF28-214ENST00000545377 CFAP54Q96N23 3096 aa9.57□□□□□ -0.88
ARHGEF28-214ENST00000545377 KRTAP7-1Q8IUC3 87 aa9.57□□□□□ -0.88
ARHGEF28-214ENST00000545377 C10orf95Q9H7T3 257 aa9.56□□□□□ -0.88
ARHGEF28-214ENST00000545377 PCNTO95613 3336 aa9.52□□□□□ -0.89
ARHGEF28-214ENST00000545377 NOTCH1P46531 2555 aa9.51□□□□□ -0.89
ARHGEF28-214ENST00000545377 GCN1Q92616 2671 aaKnown RBP9.51□□□□□ -0.89
ARHGEF28-214ENST00000545377 KRTAP25-1Q3LHN0 102 aa9.48□□□□□ -0.89
ARHGEF28-214ENST00000545377 KRTAP13-1Q8IUC0 172 aa9.46□□□□□ -0.9
ARHGEF28-214ENST00000545377 FRYQ5TBA9 3013 aa9.45□□□□□ -0.9
ARHGEF28-214ENST00000545377 KRTAP10-10P60014 251 aa9.43□□□□□ -0.9
ARHGEF28-214ENST00000545377 KRTAP16-1A8MUX0 517 aa9.42□□□□□ -0.9
ARHGEF28-214ENST00000545377 NBEAL2Q6ZNJ1 2754 aa9.39□□□□□ -0.91
ARHGEF28-214ENST00000545377 XP32Q5T750 250 aa9.36□□□□□ -0.91
ARHGEF28-214ENST00000545377 ZNF292O60281 2723 aa9.36□□□□□ -0.91
ARHGEF28-214ENST00000545377 ITPR2Q14571 2701 aa9.35□□□□□ -0.91
ARHGEF28-214ENST00000545377 MKI67P46013 3256 aaKnown RBP9.34□□□□□ -0.91
ARHGEF28-214ENST00000545377 WDFY4Q6ZS81 3184 aa9.33□□□□□ -0.92
ARHGEF28-214ENST00000545377 NDUFAF8A1L188 74 aa9.32□□□□□ -0.92
ARHGEF28-214ENST00000545377 RANBP2P49792 3224 aaKnown RBP9.3□□□□□ -0.92
ARHGEF28-214ENST00000545377 LAMA3Q16787 3333 aa9.3□□□□□ -0.92
ARHGEF28-214ENST00000545377 CHD9Q3L8U1 2897 aa9.28□□□□□ -0.92
ARHGEF28-214ENST00000545377 PRUNE2Q8WUY3 3088 aa9.28□□□□□ -0.92
ARHGEF28-214ENST00000545377 UBR5O95071 2799 aaPredicted RBP9.27□□□□□ -0.93
ARHGEF28-214ENST00000545377 IGSF10Q6WRI0 2623 aa9.26□□□□□ -0.93
ARHGEF28-214ENST00000545377 CRYBG3Q68DQ2 2970 aa9.25□□□□□ -0.93
ARHGEF28-214ENST00000545377 DSPP15924 2871 aaKnown RBP9.23□□□□□ -0.93
ARHGEF28-214ENST00000545377 PRO2289Q9P1D8 64 aa9.23□□□□□ -0.93
ARHGEF28-214ENST00000545377 NSD1Q96L73 2696 aaPredicted RBP9.22□□□□□ -0.93
ARHGEF28-214ENST00000545377 TRIOO75962 3097 aa9.22□□□□□ -0.93
ARHGEF28-214ENST00000545377 MAP1AP78559 2803 aaPredicted RBP9.22□□□□□ -0.93
ARHGEF28-214ENST00000545377 REV3LO60673 3130 aa9.2□□□□□ -0.94
ARHGEF28-214ENST00000545377 A6NN06 94 aa9.2□□□□□ -0.94
ARHGEF28-214ENST00000545377 LAMA2P24043 3122 aaKnown RBP9.18□□□□□ -0.94
ARHGEF28-214ENST00000545377 TPRXLQ17RH7 258 aa9.16□□□□□ -0.94
ARHGEF28-214ENST00000545377 XIRP2A4UGR9 3374 aa9.16□□□□□ -0.94
ARHGEF28-214ENST00000545377 KMT2BQ9UMN6 2715 aaPredicted RBP9.15□□□□□ -0.94
ARHGEF28-214ENST00000545377 KRTAP1-4P0C5Y4 121 aa9.15□□□□□ -0.94
ARHGEF28-214ENST00000545377 HTTP42858 3142 aa9.15□□□□□ -0.95
ARHGEF28-214ENST00000545377 BRCA2P51587 3418 aa9.14□□□□□ -0.95
ARHGEF28-214ENST00000545377 PP632Q6XCG6 107 aa9.09□□□□□ -0.95
ARHGEF28-214ENST00000545377 UNC80Q8N2C7 3258 aa9.09□□□□□ -0.95
ARHGEF28-214ENST00000545377 FREM2Q5SZK8 3169 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms