RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	ST20-AS1	Q8NBB2	130 aa		7.59	□□□□□ -1.19
POLE-222	ENST00000545015	COX7B	P24311	80 aa		7.58	□□□□□ -1.2
POLE-222	ENST00000545015	C6orf99	Q4VX62	202 aa		7.58	□□□□□ -1.2
POLE-222	ENST00000545015	MTURN	Q8N3F0	131 aa		7.58	□□□□□ -1.2
POLE-222	ENST00000545015	HIST1H4G	Q99525	98 aa		7.58	□□□□□ -1.2
POLE-222	ENST00000545015	CDIP1	Q9H305	208 aa		7.58	□□□□□ -1.2
POLE-222	ENST00000545015	NHP2	Q9NX24	153 aa	Known RBP	7.58	□□□□□ -1.2
POLE-222	ENST00000545015		A0A1B0GV72	72 aa		7.57	□□□□□ -1.2
POLE-222	ENST00000545015	FXYD2	P54710	66 aa		7.57	□□□□□ -1.2
POLE-222	ENST00000545015		Q8N377	158 aa		7.57	□□□□□ -1.2
POLE-222	ENST00000545015	NAA38	Q9BRA0	125 aa	Known RBP	7.57	□□□□□ -1.2
POLE-222	ENST00000545015	MUSTN1	Q8IVN3	82 aa		7.56	□□□□□ -1.2
POLE-222	ENST00000545015	KRTAP13-3	Q3SY46	172 aa		7.55	□□□□□ -1.2
POLE-222	ENST00000545015		A0A1B0GWB2	263 aa		7.54	□□□□□ -1.2
POLE-222	ENST00000545015	SLC25A20	O43772	301 aa		7.54	□□□□□ -1.2
POLE-222	ENST00000545015	C9orf153	Q5TBE3	101 aa		7.54	□□□□□ -1.2
POLE-222	ENST00000545015	TRAV13-2	A0A0B4J235	113 aa		7.53	□□□□□ -1.2
POLE-222	ENST00000545015		A0A0U1RQV1	116 aa		7.52	□□□□□ -1.21
POLE-222	ENST00000545015		A4D1N5	150 aa		7.52	□□□□□ -1.21
POLE-222	ENST00000545015	LAMTOR3	Q9UHA4	124 aa		7.52	□□□□□ -1.21
POLE-222	ENST00000545015	MUC17	Q685J3	4493 aa		7.52	□□□□□ -1.21
POLE-222	ENST00000545015	IGLV5-48	A0A075B6I7	105 aa		7.51	□□□□□ -1.21
POLE-222	ENST00000545015		K7ERJ3	54 aa		7.51	□□□□□ -1.21
POLE-222	ENST00000545015	TEX49	A0A1B0GTD5	131 aa		7.5	□□□□□ -1.21
POLE-222	ENST00000545015	LINC01547	P58512	204 aa	Predicted RBP	7.49	□□□□□ -1.21
POLE-222	ENST00000545015	TRBV20-1	A0A075B6N2	111 aa		7.48	□□□□□ -1.21
POLE-222	ENST00000545015		H3BMG7	143 aa		7.48	□□□□□ -1.21
POLE-222	ENST00000545015	CD164	Q04900	197 aa		7.48	□□□□□ -1.21
POLE-222	ENST00000545015	SMIM29	Q86T20	159 aa		7.48	□□□□□ -1.21
POLE-222	ENST00000545015	SMIM11B	Q8TCY0	68 aa		7.48	□□□□□ -1.21
POLE-222	ENST00000545015	LIMD2	Q9BT23	127 aa		7.47	□□□□□ -1.21
POLE-222	ENST00000545015	ETDB	Q3ZM63	59 aa		7.46	□□□□□ -1.22
POLE-222	ENST00000545015	ASB16-AS1	Q495Z4	193 aa		7.46	□□□□□ -1.22
POLE-222	ENST00000545015		Q5XG85	94 aa		7.45	□□□□□ -1.22
POLE-222	ENST00000545015	PPDPFL	Q8WWR9	84 aa		7.45	□□□□□ -1.22
POLE-222	ENST00000545015		Q1RN00	199 aa		7.44	□□□□□ -1.22
POLE-222	ENST00000545015	DEFB105A	Q8NG35	78 aa		7.44	□□□□□ -1.22
POLE-222	ENST00000545015	PRO0461	Q9UI25	63 aa		7.44	□□□□□ -1.22
POLE-222	ENST00000545015	PSMB2	P49721	201 aa		7.43	□□□□□ -1.22
POLE-222	ENST00000545015	XP32	Q5T750	250 aa		7.42	□□□□□ -1.22
POLE-222	ENST00000545015	LINC00575	Q6W349	94 aa		7.42	□□□□□ -1.22
POLE-222	ENST00000545015	FAT4	Q6V0I7	4981 aa		7.41	□□□□□ -1.22
POLE-222	ENST00000545015	SCGB1C2	P0DMR2	95 aa		7.41	□□□□□ -1.22
POLE-222	ENST00000545015	SEC61B	P60468	96 aa	Known RBP	7.41	□□□□□ -1.22
POLE-222	ENST00000545015	LCE2A	Q5TA79	106 aa	Predicted RBP	7.41	□□□□□ -1.22
POLE-222	ENST00000545015	TEN1	Q86WV5	123 aa		7.41	□□□□□ -1.22
POLE-222	ENST00000545015		H7C2G1	150 aa		7.4	□□□□□ -1.22
POLE-222	ENST00000545015	HRCT1	Q6UXD1	115 aa		7.39	□□□□□ -1.23
POLE-222	ENST00000545015	PRO1854	Q9UHT4	67 aa		7.39	□□□□□ -1.23
POLE-222	ENST00000545015	hADV29S1	A0JD25	119 aa		7.37	□□□□□ -1.23
POLE-222	ENST00000545015	IGLV8-61	A0A075B6I0	122 aa		7.36	□□□□□ -1.23
POLE-222	ENST00000545015		A0A0B4J2C4	111 aa		7.36	□□□□□ -1.23
POLE-222	ENST00000545015	ATXN8	Q156A1	80 aa		7.35	□□□□□ -1.23
POLE-222	ENST00000545015	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	7.35	□□□□□ -1.23
POLE-222	ENST00000545015		Q6ZQY7	126 aa		7.35	□□□□□ -1.23
POLE-222	ENST00000545015	KRTAP4-1	Q9BYQ7	146 aa		7.34	□□□□□ -1.23
POLE-222	ENST00000545015	TCL1B	O95988	128 aa		7.33	□□□□□ -1.24
POLE-222	ENST00000545015	CFC1B	P0CG36	223 aa		7.33	□□□□□ -1.24
POLE-222	ENST00000545015	CFC1	P0CG37	223 aa		7.33	□□□□□ -1.24
POLE-222	ENST00000545015	SMCP	P49901	116 aa	Predicted RBP	7.33	□□□□□ -1.24
POLE-222	ENST00000545015	C1orf195	Q5TG92	126 aa		7.33	□□□□□ -1.24
POLE-222	ENST00000545015		Q6JHZ5	121 aa		7.33	□□□□□ -1.24
POLE-222	ENST00000545015		A0A0G2JQZ4	141 aa		7.32	□□□□□ -1.24
POLE-222	ENST00000545015		F8WEM9	126 aa		7.32	□□□□□ -1.24
POLE-222	ENST00000545015	SNCG	O76070	127 aa		7.32	□□□□□ -1.24
POLE-222	ENST00000545015	COX6C	P09669	75 aa		7.32	□□□□□ -1.24
POLE-222	ENST00000545015	SVIP	Q8NHG7	77 aa		7.32	□□□□□ -1.24
POLE-222	ENST00000545015	ANKRD29	Q8N6D5	301 aa		7.31	□□□□□ -1.24
POLE-222	ENST00000545015	ANAPC13	Q9BS18	74 aa		7.31	□□□□□ -1.24
POLE-222	ENST00000545015		C9JAW5	83 aa		7.3	□□□□□ -1.24
POLE-222	ENST00000545015	MT-ATP8	P03928	68 aa		7.3	□□□□□ -1.24
POLE-222	ENST00000545015		Q6Q795	121 aa		7.3	□□□□□ -1.24
POLE-222	ENST00000545015	CLEC2B	Q92478	149 aa		7.29	□□□□□ -1.24
POLE-222	ENST00000545015		H0YGX0	51 aa		7.28	□□□□□ -1.24
POLE-222	ENST00000545015		H3BT86	120 aa		7.28	□□□□□ -1.24
POLE-222	ENST00000545015	IGFL1	Q6UW32	110 aa		7.28	□□□□□ -1.24
POLE-222	ENST00000545015	TRBV7-7	A0A0K0K1E9	115 aa		7.26	□□□□□ -1.25
POLE-222	ENST00000545015	C9orf92	A6NGG3	77 aa		7.26	□□□□□ -1.25
POLE-222	ENST00000545015		A0A1B0GX51	115 aa		7.24	□□□□□ -1.25
POLE-222	ENST00000545015	FAM240A	A0A1B0GVK7	77 aa		7.23	□□□□□ -1.25
POLE-222	ENST00000545015	PCOTH	Q58A44	107 aa		7.23	□□□□□ -1.25
POLE-222	ENST00000545015	FAM218A	Q96MZ4	157 aa		7.23	□□□□□ -1.25
POLE-222	ENST00000545015	ACYP1	P07311	99 aa		7.22	□□□□□ -1.25
POLE-222	ENST00000545015	NDUFV3	P56181	108 aa	Known RBP	7.21	□□□□□ -1.26
POLE-222	ENST00000545015	TRIAP1	O43715	76 aa		7.2	□□□□□ -1.26
POLE-222	ENST00000545015	GHRH	P01286	108 aa		7.2	□□□□□ -1.26
POLE-222	ENST00000545015	RPL37	P61927	97 aa	Known RBP	7.2	□□□□□ -1.26
POLE-222	ENST00000545015	LST1	O00453	97 aa		7.18	□□□□□ -1.26
POLE-222	ENST00000545015	KRTAP19-2	Q3LHN2	52 aa		7.18	□□□□□ -1.26
POLE-222	ENST00000545015	LCE2C	Q5TA81	110 aa		7.18	□□□□□ -1.26
POLE-222	ENST00000545015	KRTAP9-2	Q9BYQ4	174 aa		7.17	□□□□□ -1.26
POLE-222	ENST00000545015	IMUP	Q9GZP8	106 aa		7.17	□□□□□ -1.26
POLE-222	ENST00000545015	SS18L2	Q9UHA2	77 aa		7.15	□□□□□ -1.26
POLE-222	ENST00000545015		H3BQ85	93 aa		7.13	□□□□□ -1.27
POLE-222	ENST00000545015	TRAC	P01848	142 aa		7.12	□□□□□ -1.27
POLE-222	ENST00000545015		Q75L30	129 aa		7.1	□□□□□ -1.27
POLE-222	ENST00000545015	LINC00643	Q86TS7	51 aa		7.1	□□□□□ -1.27
POLE-222	ENST00000545015	ORMDL1	Q9P0S3	153 aa		7.09	□□□□□ -1.27
POLE-222	ENST00000545015		A0A087WSZ3	146 aa		7.08	□□□□□ -1.28
POLE-222	ENST00000545015	DNAL4	O96015	105 aa		7.08	□□□□□ -1.28

Retrieved 100 of 20,778 RNA–protein pairs in 171 ms