RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 A0A1B0GWB2 263 aa4.24□□□□□ -1.73
CPSF7-224ENST00000544990 MOBPQ13875 183 aa4.24□□□□□ -1.73
CPSF7-224ENST00000544990 A4D1N5 150 aa4.23□□□□□ -1.73
CPSF7-224ENST00000544990 COX8AP10176 69 aa4.23□□□□□ -1.73
CPSF7-224ENST00000544990 TAL2Q16559 108 aa4.23□□□□□ -1.73
CPSF7-224ENST00000544990 C9orf153Q5TBE3 101 aa4.23□□□□□ -1.73
CPSF7-224ENST00000544990 ST20-AS1Q8NBB2 130 aa4.23□□□□□ -1.73
CPSF7-224ENST00000544990 RETNLBQ9BQ08 111 aa4.23□□□□□ -1.73
CPSF7-224ENST00000544990 LAMTOR3Q9UHA4 124 aa4.23□□□□□ -1.73
CPSF7-224ENST00000544990 IGLV7-46A0A075B6I9 117 aa4.22□□□□□ -1.73
CPSF7-224ENST00000544990 DLEU1O43261 78 aa4.22□□□□□ -1.73
CPSF7-224ENST00000544990 SPRR1BP22528 89 aa4.22□□□□□ -1.73
CPSF7-224ENST00000544990 VAMP3Q15836 100 aa4.22□□□□□ -1.73
CPSF7-224ENST00000544990 HIST1H4GQ99525 98 aa4.22□□□□□ -1.73
CPSF7-224ENST00000544990 NHP2Q9NX24 153 aaKnown RBP4.22□□□□□ -1.73
CPSF7-224ENST00000544990 LRP2P98164 4655 aa4.22□□□□□ -1.73
CPSF7-224ENST00000544990 TEX49A0A1B0GTD5 131 aa4.21□□□□□ -1.74
CPSF7-224ENST00000544990 SLC25A20O43772 301 aa4.21□□□□□ -1.74
CPSF7-224ENST00000544990 RPS29P62273 56 aaKnown RBP4.21□□□□□ -1.74
CPSF7-224ENST00000544990 SMIM29Q86T20 159 aa4.21□□□□□ -1.74
CPSF7-224ENST00000544990 DEFB105AQ8NG35 78 aa4.21□□□□□ -1.74
CPSF7-224ENST00000544990 SMIM11BQ8TCY0 68 aa4.21□□□□□ -1.74
CPSF7-224ENST00000544990 KRTAP9-8Q9BYQ0 159 aa4.21□□□□□ -1.74
CPSF7-224ENST00000544990 LINC01547P58512 204 aaPredicted RBP4.2□□□□□ -1.74
CPSF7-224ENST00000544990 SPATA45Q537H7 98 aa4.2□□□□□ -1.74
CPSF7-224ENST00000544990 FP248Q71RG6 208 aaPredicted RBP4.2□□□□□ -1.74
CPSF7-224ENST00000544990 VAMP8Q9BV40 100 aa4.2□□□□□ -1.74
CPSF7-224ENST00000544990 RNF213Q63HN8 5207 aa4.19□□□□□ -1.74
CPSF7-224ENST00000544990 TPRXLQ17RH7 258 aa4.19□□□□□ -1.74
CPSF7-224ENST00000544990 C14orf144Q96I85 54 aa4.19□□□□□ -1.74
CPSF7-224ENST00000544990 Q1RN00 199 aa4.18□□□□□ -1.74
CPSF7-224ENST00000544990 HIGD1BQ9P298 99 aa4.18□□□□□ -1.74
CPSF7-224ENST00000544990 LPAP08519 4548 aa4.18□□□□□ -1.74
CPSF7-224ENST00000544990 IGLV5-48A0A075B6I7 105 aa4.17□□□□□ -1.74
CPSF7-224ENST00000544990 BVES-AS1Q5T3Y7 98 aa4.17□□□□□ -1.74
CPSF7-224ENST00000544990 Q8N377 158 aa4.17□□□□□ -1.74
CPSF7-224ENST00000544990 RAB37Q96AX2 223 aa4.17□□□□□ -1.74
CPSF7-224ENST00000544990 C12orf57Q99622 126 aa4.17□□□□□ -1.74
CPSF7-224ENST00000544990 LIMD2Q9BT23 127 aa4.17□□□□□ -1.74
CPSF7-224ENST00000544990 PRO1933Q9H354 126 aa4.17□□□□□ -1.74
CPSF7-224ENST00000544990 hADV29S1A0JD25 119 aa4.16□□□□□ -1.74
CPSF7-224ENST00000544990 LINC00575Q6W349 94 aa4.16□□□□□ -1.74
CPSF7-224ENST00000544990 F8WEM9 126 aa4.15□□□□□ -1.75
CPSF7-224ENST00000544990 SNCGO76070 127 aa4.15□□□□□ -1.75
CPSF7-224ENST00000544990 CFC1BP0CG36 223 aa4.15□□□□□ -1.75
CPSF7-224ENST00000544990 CFC1P0CG37 223 aa4.15□□□□□ -1.75
CPSF7-224ENST00000544990 CD164Q04900 197 aa4.15□□□□□ -1.75
CPSF7-224ENST00000544990 HRCT1Q6UXD1 115 aa4.15□□□□□ -1.75
CPSF7-224ENST00000544990 A0A0B4J2C4 111 aa4.14□□□□□ -1.75
CPSF7-224ENST00000544990 H7C2G1 150 aa4.14□□□□□ -1.75
CPSF7-224ENST00000544990 PYY3Q5JQD4 70 aa4.14□□□□□ -1.75
CPSF7-224ENST00000544990 Q6ZQY7 126 aa4.14□□□□□ -1.75
CPSF7-224ENST00000544990 C2orf91Q6ZV80 131 aa4.14□□□□□ -1.75
CPSF7-224ENST00000544990 CEND1Q8N111 149 aa4.14□□□□□ -1.75
CPSF7-224ENST00000544990 H0YGX0 51 aa4.13□□□□□ -1.75
CPSF7-224ENST00000544990 KRTAP13-3Q3SY46 172 aa4.13□□□□□ -1.75
CPSF7-224ENST00000544990 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.13□□□□□ -1.75
CPSF7-224ENST00000544990 A0A0U1RQV1 116 aa4.12□□□□□ -1.75
CPSF7-224ENST00000544990 PPDPFLQ8WWR9 84 aa4.12□□□□□ -1.75
CPSF7-224ENST00000544990 OCIAD2Q56VL3 154 aa4.11□□□□□ -1.75
CPSF7-224ENST00000544990 Q5XG85 94 aa4.11□□□□□ -1.75
CPSF7-224ENST00000544990 Q6JHZ5 121 aa4.11□□□□□ -1.75
CPSF7-224ENST00000544990 SNHG12Q9BXW3 62 aa4.11□□□□□ -1.75
CPSF7-224ENST00000544990 PRO1854Q9UHT4 67 aa4.11□□□□□ -1.75
CPSF7-224ENST00000544990 FXYD2P54710 66 aa4.1□□□□□ -1.75
CPSF7-224ENST00000544990 HSD52Q0P140 79 aa4.1□□□□□ -1.75
CPSF7-224ENST00000544990 PRAC1Q96KF2 57 aa4.1□□□□□ -1.75
CPSF7-224ENST00000544990 UQCR10Q9UDW1 63 aa4.1□□□□□ -1.75
CPSF7-224ENST00000544990 IGLV8-61A0A075B6I0 122 aa4.09□□□□□ -1.75
CPSF7-224ENST00000544990 A0A0G2JQZ4 141 aa4.09□□□□□ -1.75
CPSF7-224ENST00000544990 A0A1B0GX51 115 aa4.09□□□□□ -1.75
CPSF7-224ENST00000544990 TCL1BO95988 128 aa4.09□□□□□ -1.75
CPSF7-224ENST00000544990 PCP4L1A6NKN8 68 aa4.08□□□□□ -1.76
CPSF7-224ENST00000544990 SMIM6P0DI80 62 aa4.08□□□□□ -1.76
CPSF7-224ENST00000544990 LCE1AQ5T7P2 110 aa4.08□□□□□ -1.76
CPSF7-224ENST00000544990 CLEC2BQ92478 149 aa4.08□□□□□ -1.76
CPSF7-224ENST00000544990 COX6CP09669 75 aa4.07□□□□□ -1.76
CPSF7-224ENST00000544990 ASB16-AS1Q495Z4 193 aa4.07□□□□□ -1.76
CPSF7-224ENST00000544990 IGFL1Q6UW32 110 aa4.07□□□□□ -1.76
CPSF7-224ENST00000544990 PSMB2P49721 201 aa4.06□□□□□ -1.76
CPSF7-224ENST00000544990 C1orf195Q5TG92 126 aa4.06□□□□□ -1.76
CPSF7-224ENST00000544990 FAM218AQ96MZ4 157 aa4.06□□□□□ -1.76
CPSF7-224ENST00000544990 TRBV7-7A0A0K0K1E9 115 aa4.05□□□□□ -1.76
CPSF7-224ENST00000544990 H3BQ85 93 aa4.05□□□□□ -1.76
CPSF7-224ENST00000544990 DNAL4O96015 105 aa4.05□□□□□ -1.76
CPSF7-224ENST00000544990 FABP2P12104 132 aa4.05□□□□□ -1.76
CPSF7-224ENST00000544990 NDUFV3P56181 108 aaKnown RBP4.05□□□□□ -1.76
CPSF7-224ENST00000544990 C9orf92A6NGG3 77 aa4.04□□□□□ -1.76
CPSF7-224ENST00000544990 H3BUT2 72 aa4.04□□□□□ -1.76
CPSF7-224ENST00000544990 H3BMG7 143 aa4.03□□□□□ -1.76
CPSF7-224ENST00000544990 K7ERJ3 54 aa4.03□□□□□ -1.76
CPSF7-224ENST00000544990 TEN1Q86WV5 123 aa4.03□□□□□ -1.76
CPSF7-224ENST00000544990 ORMDL1Q9P0S3 153 aa4.03□□□□□ -1.76
CPSF7-224ENST00000544990 TMEM256-PLSCR3K7ERE1 68 aa4.02□□□□□ -1.77
CPSF7-224ENST00000544990 LST1O00453 97 aa4.02□□□□□ -1.77
CPSF7-224ENST00000544990 SCGB1C2P0DMR2 95 aa4.02□□□□□ -1.77
CPSF7-224ENST00000544990 Q6Q795 121 aa4.02□□□□□ -1.77
CPSF7-224ENST00000544990 Q6ZVQ6 151 aa4.02□□□□□ -1.77
CPSF7-224ENST00000544990 SS18L2Q9UHA2 77 aa4.02□□□□□ -1.77
CPSF7-224ENST00000544990 MUC2Q02817 5179 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms