RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 HIGD1BQ9P298 99 aa6.93□□□□□ -1.3
USP28-212ENST00000544750 TMA7Q9Y2S6 64 aaKnown RBP6.93□□□□□ -1.3
USP28-212ENST00000544750 C9orf153Q5TBE3 101 aa6.92□□□□□ -1.3
USP28-212ENST00000544750 IGLV5-48A0A075B6I7 105 aa6.91□□□□□ -1.3
USP28-212ENST00000544750 SLC25A34Q6PIV7 304 aa6.91□□□□□ -1.3
USP28-212ENST00000544750 SMIM29Q86T20 159 aa6.9□□□□□ -1.3
USP28-212ENST00000544750 TEX49A0A1B0GTD5 131 aa6.89□□□□□ -1.31
USP28-212ENST00000544750 DEFB105AQ8NG35 78 aa6.89□□□□□ -1.31
USP28-212ENST00000544750 C9orf92A6NGG3 77 aa6.88□□□□□ -1.31
USP28-212ENST00000544750 M0R2T5 61 aa6.88□□□□□ -1.31
USP28-212ENST00000544750 CFC1P0CG37 223 aa6.88□□□□□ -1.31
USP28-212ENST00000544750 TAL2Q16559 108 aa6.88□□□□□ -1.31
USP28-212ENST00000544750 Q1RN00 199 aa6.88□□□□□ -1.31
USP28-212ENST00000544750 LINC00575Q6W349 94 aa6.88□□□□□ -1.31
USP28-212ENST00000544750 LAMTOR3Q9UHA4 124 aa6.88□□□□□ -1.31
USP28-212ENST00000544750 SSPOA2VEC9 5147 aa6.88□□□□□ -1.31
USP28-212ENST00000544750 SMCPP49901 116 aaPredicted RBP6.87□□□□□ -1.31
USP28-212ENST00000544750 NHP2Q9NX24 153 aaKnown RBP6.86□□□□□ -1.31
USP28-212ENST00000544750 A0A0B4J2C4 111 aa6.85□□□□□ -1.31
USP28-212ENST00000544750 CEND1Q8N111 149 aa6.85□□□□□ -1.31
USP28-212ENST00000544750 FXYD2P54710 66 aa6.84□□□□□ -1.31
USP28-212ENST00000544750 VAMP3Q15836 100 aa6.84□□□□□ -1.31
USP28-212ENST00000544750 USH2AO75445 5202 aa6.83□□□□□ -1.32
USP28-212ENST00000544750 hADV29S1A0JD25 119 aa6.83□□□□□ -1.32
USP28-212ENST00000544750 Q6ZQY7 126 aa6.83□□□□□ -1.32
USP28-212ENST00000544750 A0A0G2JQZ4 141 aa6.82□□□□□ -1.32
USP28-212ENST00000544750 H7C2G1 150 aa6.82□□□□□ -1.32
USP28-212ENST00000544750 BVES-AS1Q5T3Y7 98 aa6.82□□□□□ -1.32
USP28-212ENST00000544750 HRCT1Q6UXD1 115 aa6.82□□□□□ -1.32
USP28-212ENST00000544750 RAB37Q96AX2 223 aa6.82□□□□□ -1.32
USP28-212ENST00000544750 LIMD2Q9BT23 127 aa6.82□□□□□ -1.32
USP28-212ENST00000544750 PRO1933Q9H354 126 aa6.81□□□□□ -1.32
USP28-212ENST00000544750 CD164Q04900 197 aa6.8□□□□□ -1.32
USP28-212ENST00000544750 COX6B2Q6YFQ2 88 aa6.8□□□□□ -1.32
USP28-212ENST00000544750 HSD52Q0P140 79 aa6.79□□□□□ -1.32
USP28-212ENST00000544750 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.79□□□□□ -1.32
USP28-212ENST00000544750 FAM218AQ96MZ4 157 aa6.79□□□□□ -1.32
USP28-212ENST00000544750 TMEM238LA0A1B0GVL6 79 aa6.78□□□□□ -1.32
USP28-212ENST00000544750 A6NJY4 79 aa6.78□□□□□ -1.32
USP28-212ENST00000544750 RPL37P61927 97 aaKnown RBP6.78□□□□□ -1.32
USP28-212ENST00000544750 PRO1854Q9UHT4 67 aa6.78□□□□□ -1.32
USP28-212ENST00000544750 UQCR10Q9UDW1 63 aa6.77□□□□□ -1.33
USP28-212ENST00000544750 K7ERJ3 54 aa6.75□□□□□ -1.33
USP28-212ENST00000544750 Q5XG85 94 aa6.75□□□□□ -1.33
USP28-212ENST00000544750 H0YGX0 51 aa6.74□□□□□ -1.33
USP28-212ENST00000544750 TRIAP1O43715 76 aa6.74□□□□□ -1.33
USP28-212ENST00000544750 PPDPFLQ8WWR9 84 aa6.74□□□□□ -1.33
USP28-212ENST00000544750 FCGBPQ9Y6R7 5405 aaPredicted RBP6.73□□□□□ -1.33
USP28-212ENST00000544750 F8WEM9 126 aa6.73□□□□□ -1.33
USP28-212ENST00000544750 IGFL1Q6UW32 110 aa6.73□□□□□ -1.33
USP28-212ENST00000544750 OCIAD2Q56VL3 154 aa6.72□□□□□ -1.33
USP28-212ENST00000544750 C1orf195Q5TG92 126 aa6.72□□□□□ -1.33
USP28-212ENST00000544750 KRTAP9-8Q9BYQ0 159 aa6.72□□□□□ -1.33
USP28-212ENST00000544750 CLEC2BQ92478 149 aa6.71□□□□□ -1.34
USP28-212ENST00000544750 A0A1B0GX51 115 aa6.7□□□□□ -1.34
USP28-212ENST00000544750 Q6JHZ5 121 aa6.7□□□□□ -1.34
USP28-212ENST00000544750 H3BUT2 72 aa6.69□□□□□ -1.34
USP28-212ENST00000544750 SNHG12Q9BXW3 62 aa6.69□□□□□ -1.34
USP28-212ENST00000544750 TRBV7-7A0A0K0K1E9 115 aa6.68□□□□□ -1.34
USP28-212ENST00000544750 SMIM6P0DI80 62 aa6.67□□□□□ -1.34
USP28-212ENST00000544750 SNCGO76070 127 aa6.66□□□□□ -1.34
USP28-212ENST00000544750 NDUFV3P56181 108 aaKnown RBP6.66□□□□□ -1.34
USP28-212ENST00000544750 PSMB2P49721 201 aa6.65□□□□□ -1.34
USP28-212ENST00000544750 TCL1BO95988 128 aa6.64□□□□□ -1.35
USP28-212ENST00000544750 LOC105371267A0A1B0GV96 52 aa6.63□□□□□ -1.35
USP28-212ENST00000544750 Q6Q795 121 aa6.63□□□□□ -1.35
USP28-212ENST00000544750 FABP2P12104 132 aa6.62□□□□□ -1.35
USP28-212ENST00000544750 KRTAP19-1Q8IUB9 90 aa6.62□□□□□ -1.35
USP28-212ENST00000544750 H3BMG7 143 aa6.61□□□□□ -1.35
USP28-212ENST00000544750 COX6CP09669 75 aa6.61□□□□□ -1.35
USP28-212ENST00000544750 DNAL4O96015 105 aa6.6□□□□□ -1.35
USP28-212ENST00000544750 ORMDL1Q9P0S3 153 aa6.6□□□□□ -1.35
USP28-212ENST00000544750 LST1O00453 97 aa6.59□□□□□ -1.35
USP28-212ENST00000544750 GHRHP01286 108 aa6.59□□□□□ -1.35
USP28-212ENST00000544750 TEN1Q86WV5 123 aa6.59□□□□□ -1.35
USP28-212ENST00000544750 A0A1W2PNM2 257 aa6.58□□□□□ -1.36
USP28-212ENST00000544750 M0R143 59 aa6.58□□□□□ -1.36
USP28-212ENST00000544750 TRACP01848 142 aa6.58□□□□□ -1.36
USP28-212ENST00000544750 A0A1B0GV72 72 aa6.56□□□□□ -1.36
USP28-212ENST00000544750 H3BQ85 93 aa6.56□□□□□ -1.36
USP28-212ENST00000544750 TMEM256-PLSCR3K7ERE1 68 aa6.56□□□□□ -1.36
USP28-212ENST00000544750 MT2AP02795 61 aa6.56□□□□□ -1.36
USP28-212ENST00000544750 Q75L30 129 aa6.56□□□□□ -1.36
USP28-212ENST00000544750 NAA38Q9BRA0 125 aaKnown RBP6.56□□□□□ -1.36
USP28-212ENST00000544750 A0A087WSZ3 146 aa6.55□□□□□ -1.36
USP28-212ENST00000544750 SCGB1C2P0DMR2 95 aa6.55□□□□□ -1.36
USP28-212ENST00000544750 Q96NJ1 140 aa6.55□□□□□ -1.36
USP28-212ENST00000544750 UBE2V1Q13404 147 aa6.54□□□□□ -1.36
USP28-212ENST00000544750 SS18L2Q9UHA2 77 aa6.54□□□□□ -1.36
USP28-212ENST00000544750 TSTD3H0UI37 97 aa6.53□□□□□ -1.36
USP28-212ENST00000544750 ATP11AUNQ6ZP68 121 aa6.53□□□□□ -1.36
USP28-212ENST00000544750 KRTAP9-3Q9BYQ3 159 aa6.53□□□□□ -1.36
USP28-212ENST00000544750 ANKRD29Q8N6D5 301 aa6.52□□□□□ -1.37
USP28-212ENST00000544750 TRBV7-4A0A0J9YYF1 115 aa6.51□□□□□ -1.37
USP28-212ENST00000544750 MT1FP04733 61 aa6.51□□□□□ -1.37
USP28-212ENST00000544750 OBSCN-AS1Q96MR7 158 aa6.5□□□□□ -1.37
USP28-212ENST00000544750 BAALC-AS2P0C853 105 aa6.49□□□□□ -1.37
USP28-212ENST00000544750 MACF1Q9UPN3 7388 aaKnown RBP6.49□□□□□ -1.37
USP28-212ENST00000544750 CCKP06307 115 aa6.48□□□□□ -1.37
USP28-212ENST00000544750 ATXN8Q156A1 80 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms