RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 MIR7-3HGQ8N6C7 128 aa3.41□□□□□ -1.86
CPSF7-222ENST00000544585 SPANXA2-OT1Q8N9U9 137 aa3.41□□□□□ -1.86
CPSF7-222ENST00000544585 HIGD1BQ9P298 99 aa3.41□□□□□ -1.86
CPSF7-222ENST00000544585 TP73-AS1Q9UF72 201 aa3.41□□□□□ -1.86
CPSF7-222ENST00000544585 K7EMI3 77 aa3.4□□□□□ -1.87
CPSF7-222ENST00000544585 DPM2O94777 84 aa3.4□□□□□ -1.87
CPSF7-222ENST00000544585 MRPS36P82909 103 aaKnown RBP3.4□□□□□ -1.87
CPSF7-222ENST00000544585 KRTAP13-2Q52LG2 175 aa3.4□□□□□ -1.87
CPSF7-222ENST00000544585 Q6ZUT4 128 aa3.4□□□□□ -1.87
CPSF7-222ENST00000544585 FP248Q71RG6 208 aaPredicted RBP3.4□□□□□ -1.87
CPSF7-222ENST00000544585 SPANXA1Q9NS26 97 aa3.4□□□□□ -1.87
CPSF7-222ENST00000544585 MUC17Q685J3 4493 aa3.4□□□□□ -1.87
CPSF7-222ENST00000544585 LINC01549A6NIU2 74 aa3.39□□□□□ -1.87
CPSF7-222ENST00000544585 IGKCP01834 107 aa3.39□□□□□ -1.87
CPSF7-222ENST00000544585 PLNP26678 52 aa3.39□□□□□ -1.87
CPSF7-222ENST00000544585 MP68P56378 58 aa3.39□□□□□ -1.87
CPSF7-222ENST00000544585 C2orf82Q6UX34 121 aa3.39□□□□□ -1.87
CPSF7-222ENST00000544585 SMIM20Q8N5G0 67 aa3.39□□□□□ -1.87
CPSF7-222ENST00000544585 C20orf78Q9BR46 151 aa3.39□□□□□ -1.87
CPSF7-222ENST00000544585 TRAV12-1A0A0B4J245 112 aa3.38□□□□□ -1.87
CPSF7-222ENST00000544585 SMIM13P0DJ93 91 aa3.38□□□□□ -1.87
CPSF7-222ENST00000544585 LINC00167Q96N53 147 aa3.38□□□□□ -1.87
CPSF7-222ENST00000544585 SMIM2Q9BVW6 85 aa3.38□□□□□ -1.87
CPSF7-222ENST00000544585 ERG28Q9UKR5 140 aa3.38□□□□□ -1.87
CPSF7-222ENST00000544585 SSPOA2VEC9 5147 aa3.38□□□□□ -1.87
CPSF7-222ENST00000544585 K7EP34 96 aa3.37□□□□□ -1.87
CPSF7-222ENST00000544585 FABP2P12104 132 aa3.37□□□□□ -1.87
CPSF7-222ENST00000544585 RPL39P62891 51 aaKnown RBP3.37□□□□□ -1.87
CPSF7-222ENST00000544585 KRTAP5-3Q6L8H2 238 aa3.37□□□□□ -1.87
CPSF7-222ENST00000544585 FAM19A3Q7Z5A8 133 aa3.37□□□□□ -1.87
CPSF7-222ENST00000544585 XAGE1AQ9HD64 81 aa3.37□□□□□ -1.87
CPSF7-222ENST00000544585 A0A1W2PPM0 123 aa3.36□□□□□ -1.87
CPSF7-222ENST00000544585 F8VRH5 84 aa3.36□□□□□ -1.87
CPSF7-222ENST00000544585 H3BUT2 72 aa3.36□□□□□ -1.87
CPSF7-222ENST00000544585 K7ERS5 55 aa3.36□□□□□ -1.87
CPSF7-222ENST00000544585 KRTAP13-3Q3SY46 172 aa3.36□□□□□ -1.87
CPSF7-222ENST00000544585 Q8IZM0 81 aa3.36□□□□□ -1.87
CPSF7-222ENST00000544585 TOMM6Q96B49 74 aa3.36□□□□□ -1.87
CPSF7-222ENST00000544585 SCGB3A1Q96QR1 104 aa3.36□□□□□ -1.87
CPSF7-222ENST00000544585 SPCS1Q9Y6A9 102 aa3.36□□□□□ -1.87
CPSF7-222ENST00000544585 SCGB1D4Q6XE38 83 aa3.35□□□□□ -1.87
CPSF7-222ENST00000544585 KRTAP13-1Q8IUC0 172 aa3.35□□□□□ -1.87
CPSF7-222ENST00000544585 ST20-AS1Q8NBB2 130 aa3.35□□□□□ -1.87
CPSF7-222ENST00000544585 TMEM141Q96I45 108 aa3.35□□□□□ -1.87
CPSF7-222ENST00000544585 KRTAP4-1Q9BYQ7 146 aa3.35□□□□□ -1.87
CPSF7-222ENST00000544585 TOMM7Q9P0U1 55 aa3.35□□□□□ -1.87
CPSF7-222ENST00000544585 IGKV2-28A0A075B6P5 120 aa3.34□□□□□ -1.87
CPSF7-222ENST00000544585 MYMXA0A1B0GTQ4 84 aa3.34□□□□□ -1.87
CPSF7-222ENST00000544585 IGKV2D-28P01615 120 aa3.34□□□□□ -1.87
CPSF7-222ENST00000544585 DAND5Q8N907 189 aa3.34□□□□□ -1.87
CPSF7-222ENST00000544585 RAB37Q96AX2 223 aa3.34□□□□□ -1.87
CPSF7-222ENST00000544585 PLEKHB2Q96CS7 222 aa3.34□□□□□ -1.87
CPSF7-222ENST00000544585 CYSLTR1Q9Y271 337 aa3.34□□□□□ -1.87
CPSF7-222ENST00000544585 SPINK1P00995 79 aa3.33□□□□□ -1.88
CPSF7-222ENST00000544585 FXYD2P54710 66 aa3.33□□□□□ -1.88
CPSF7-222ENST00000544585 NDUFA12Q9UI09 145 aa3.33□□□□□ -1.88
CPSF7-222ENST00000544585 F8W1H4 67 aa3.32□□□□□ -1.88
CPSF7-222ENST00000544585 J3QR89 54 aa3.32□□□□□ -1.88
CPSF7-222ENST00000544585 HERVK_113P63121 156 aa3.32□□□□□ -1.88
CPSF7-222ENST00000544585 LYRM7Q5U5X0 104 aa3.32□□□□□ -1.88
CPSF7-222ENST00000544585 C3orf22Q8N5N4 141 aa3.32□□□□□ -1.88
CPSF7-222ENST00000544585 NHP2Q9NX24 153 aaKnown RBP3.32□□□□□ -1.88
CPSF7-222ENST00000544585 IGIPA6NJ69 53 aa3.31□□□□□ -1.88
CPSF7-222ENST00000544585 C11orf86A6NJI1 115 aa3.31□□□□□ -1.88
CPSF7-222ENST00000544585 ZNF815PA8K554 130 aa3.31□□□□□ -1.88
CPSF7-222ENST00000544585 AMELXQ99217 191 aa3.31□□□□□ -1.88
CPSF7-222ENST00000544585 TTTY13Q9BZ97 58 aa3.31□□□□□ -1.88
CPSF7-222ENST00000544585 K7ERJ3 54 aa3.3□□□□□ -1.88
CPSF7-222ENST00000544585 MT1HP80294 61 aa3.3□□□□□ -1.88
CPSF7-222ENST00000544585 PRLHP81277 87 aa3.3□□□□□ -1.88
CPSF7-222ENST00000544585 NAA38Q9BRA0 125 aaKnown RBP3.3□□□□□ -1.88
CPSF7-222ENST00000544585 TMEM126AQ9H061 195 aa3.3□□□□□ -1.88
CPSF7-222ENST00000544585 RPS29P62273 56 aaKnown RBP3.29□□□□□ -1.88
CPSF7-222ENST00000544585 CDKN2A-AS1Q9UH64 79 aa3.29□□□□□ -1.88
CPSF7-222ENST00000544585 SYNE2Q8WXH0 6885 aaKnown RBP3.29□□□□□ -1.88
CPSF7-222ENST00000544585 NEBP20929 6669 aa3.28□□□□□ -1.88
CPSF7-222ENST00000544585 TRBV20-1A0A075B6N2 111 aa3.28□□□□□ -1.88
CPSF7-222ENST00000544585 LEPROTO15243 131 aa3.28□□□□□ -1.88
CPSF7-222ENST00000544585 SLC25A20O43772 301 aa3.28□□□□□ -1.88
CPSF7-222ENST00000544585 SPINK8P0C7L1 97 aa3.28□□□□□ -1.88
CPSF7-222ENST00000544585 LGALS3P17931 250 aaKnown RBP3.28□□□□□ -1.88
CPSF7-222ENST00000544585 KRTAP10-6P60371 365 aaPredicted RBP3.28□□□□□ -1.88
CPSF7-222ENST00000544585 KRTAP19-2Q3LHN2 52 aa3.28□□□□□ -1.88
CPSF7-222ENST00000544585 TMEM170BQ5T4T1 132 aa3.28□□□□□ -1.88
CPSF7-222ENST00000544585 SSBP3-AS1Q7Z2R9 100 aa3.28□□□□□ -1.88
CPSF7-222ENST00000544585 COX7B2Q8TF08 81 aa3.28□□□□□ -1.88
CPSF7-222ENST00000544585 SPRR4Q96PI1 79 aa3.28□□□□□ -1.88
CPSF7-222ENST00000544585 HIGD2AQ9BW72 106 aa3.28□□□□□ -1.88
CPSF7-222ENST00000544585 H3BMG7 143 aa3.27□□□□□ -1.89
CPSF7-222ENST00000544585 J3QQQ9 107 aa3.27□□□□□ -1.89
CPSF7-222ENST00000544585 M0R2T5 61 aa3.27□□□□□ -1.89
CPSF7-222ENST00000544585 M0R378 163 aa3.27□□□□□ -1.89
CPSF7-222ENST00000544585 PRO0461Q9UI25 63 aa3.27□□□□□ -1.89
CPSF7-222ENST00000544585 A0A0B4J2C4 111 aa3.26□□□□□ -1.89
CPSF7-222ENST00000544585 A0A1B0GX51 115 aa3.26□□□□□ -1.89
CPSF7-222ENST00000544585 CCDC179H3BU77 68 aa3.26□□□□□ -1.89
CPSF7-222ENST00000544585 COX17Q14061 63 aa3.26□□□□□ -1.89
CPSF7-222ENST00000544585 OR13C6PQ8NH95 151 aa3.26□□□□□ -1.89
CPSF7-222ENST00000544585 PRO1854Q9UHT4 67 aa3.26□□□□□ -1.89
CPSF7-222ENST00000544585 LOC107984156A0A0G2JMH3 177 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 826.3 ms