RNA–Protein interactions for RNA: ENST00000544154.1

NPIPB3-213, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-213ENST00000544154 MGAM2Q2M2H8 2515 aa0.71□□□□□ -2.3
NPIPB3-213ENST00000544154 COL14A1Q05707 1796 aaKnown RBP0.71□□□□□ -2.3
NPIPB3-213ENST00000544154 CELSR2Q9HCU4 2923 aa0.71□□□□□ -2.3
NPIPB3-213ENST00000544154 I3L3M4 83 aa0.71□□□□□ -2.3
NPIPB3-213ENST00000544154 COX8AP10176 69 aa0.71□□□□□ -2.3
NPIPB3-213ENST00000544154 KRTAP12-3P60328 96 aa0.71□□□□□ -2.3
NPIPB3-213ENST00000544154 NREPQ16612 68 aa0.71□□□□□ -2.3
NPIPB3-213ENST00000544154 A0A0G2JMZ2 1700 aa0.71□□□□□ -2.3
NPIPB3-213ENST00000544154 MEGF8Q7Z7M0 2845 aa0.71□□□□□ -2.3
NPIPB3-213ENST00000544154 ASPMQ8IZT6 3477 aa0.71□□□□□ -2.3
NPIPB3-213ENST00000544154 DMXL1Q9Y485 3027 aa0.71□□□□□ -2.3
NPIPB3-213ENST00000544154 PIK3C2BO00750 1634 aa0.71□□□□□ -2.3
NPIPB3-213ENST00000544154 PLXNB2O15031 1838 aa0.71□□□□□ -2.3
NPIPB3-213ENST00000544154 TGP01266 2768 aa0.7□□□□□ -2.3
NPIPB3-213ENST00000544154 CDH23Q9H251 3354 aa0.7□□□□□ -2.3
NPIPB3-213ENST00000544154 DNAH14Q0VDD8 3507 aa0.7□□□□□ -2.3
NPIPB3-213ENST00000544154 SMG1Q96Q15 3661 aaKnown RBP0.7□□□□□ -2.3
NPIPB3-213ENST00000544154 K7EIL1 84 aa0.7□□□□□ -2.3
NPIPB3-213ENST00000544154 IFI6P09912 130 aa0.7□□□□□ -2.3
NPIPB3-213ENST00000544154 SFTA3P0C7M3 94 aa0.7□□□□□ -2.3
NPIPB3-213ENST00000544154 HMGA1P17096 107 aaKnown RBP0.7□□□□□ -2.3
NPIPB3-213ENST00000544154 COX7BP24311 80 aa0.7□□□□□ -2.3
NPIPB3-213ENST00000544154 KRTAP12-4P60329 112 aa0.7□□□□□ -2.3
NPIPB3-213ENST00000544154 UBL5Q9BZL1 73 aa0.7□□□□□ -2.3
NPIPB3-213ENST00000544154 TP53AIP1Q9HCN2 124 aa0.7□□□□□ -2.3
NPIPB3-213ENST00000544154 PRO0255Q9UI72 69 aa0.7□□□□□ -2.3
NPIPB3-213ENST00000544154 CADP27708 2225 aa0.7□□□□□ -2.3
NPIPB3-213ENST00000544154 CACNA1CQ13936 2221 aa0.7□□□□□ -2.3
NPIPB3-213ENST00000544154 SORL1Q92673 2214 aa0.7□□□□□ -2.3
NPIPB3-213ENST00000544154 CNTRLQ7Z7A1 2325 aa0.7□□□□□ -2.3
NPIPB3-213ENST00000544154 INO80Q9ULG1 1556 aaPredicted RBP0.7□□□□□ -2.3
NPIPB3-213ENST00000544154 XIRP2A4UGR9 3374 aa0.7□□□□□ -2.3
NPIPB3-213ENST00000544154 AHCTF1Q8WYP5 2266 aa0.69□□□□□ -2.3
NPIPB3-213ENST00000544154 VPS13AQ96RL7 3174 aa0.69□□□□□ -2.3
NPIPB3-213ENST00000544154 WNK1Q9H4A3 2382 aa0.69□□□□□ -2.3
NPIPB3-213ENST00000544154 LOC400499M0QZD8 3231 aa0.69□□□□□ -2.3
NPIPB3-213ENST00000544154 FAM103A1Q9BTL3 118 aaKnown RBP0.69□□□□□ -2.3
NPIPB3-213ENST00000544154 ARFGEF2Q9Y6D5 1785 aa0.69□□□□□ -2.3
NPIPB3-213ENST00000544154 FAT4Q6V0I7 4981 aa0.69□□□□□ -2.3
NPIPB3-213ENST00000544154 NBEAQ8NFP9 2946 aa0.69□□□□□ -2.3
NPIPB3-213ENST00000544154 ASXL3Q9C0F0 2248 aa0.69□□□□□ -2.3
NPIPB3-213ENST00000544154 PARP4Q9UKK3 1724 aaKnown RBP0.69□□□□□ -2.3
NPIPB3-213ENST00000544154 CSPG4Q6UVK1 2322 aa0.69□□□□□ -2.3
NPIPB3-213ENST00000544154 CSMD1Q96PZ7 3565 aa0.68□□□□□ -2.3
NPIPB3-213ENST00000544154 DSPP15924 2871 aaKnown RBP0.68□□□□□ -2.3
NPIPB3-213ENST00000544154 GOLGA4Q13439 2230 aaKnown RBP0.68□□□□□ -2.3
NPIPB3-213ENST00000544154 LINC00959A0A1B0GUT2 108 aa0.68□□□□□ -2.3
NPIPB3-213ENST00000544154 C3orf79P0CE67 100 aa0.68□□□□□ -2.3
NPIPB3-213ENST00000544154 FCER1GP30273 86 aa0.68□□□□□ -2.3
NPIPB3-213ENST00000544154 CNFNQ9BYD5 112 aa0.68□□□□□ -2.3
NPIPB3-213ENST00000544154 FXYD6Q9H0Q3 95 aa0.68□□□□□ -2.3
NPIPB3-213ENST00000544154 PLAC8Q9NZF1 115 aa0.68□□□□□ -2.3
NPIPB3-213ENST00000544154 BSNQ9UPA5 3926 aa0.68□□□□□ -2.3
NPIPB3-213ENST00000544154 CELSR1Q9NYQ6 3014 aa0.68□□□□□ -2.3
NPIPB3-213ENST00000544154 HIVEP1P15822 2718 aa0.68□□□□□ -2.3
NPIPB3-213ENST00000544154 ITPR2Q14571 2701 aa0.68□□□□□ -2.3
NPIPB3-213ENST00000544154 SYCP2Q9BX26 1530 aa0.68□□□□□ -2.3
NPIPB3-213ENST00000544154 NSD1Q96L73 2696 aaPredicted RBP0.68□□□□□ -2.3
NPIPB3-213ENST00000544154 LRRC37AA6NMS7 1700 aa0.67□□□□□ -2.3
NPIPB3-213ENST00000544154 PLXNC1O60486 1568 aa0.67□□□□□ -2.3
NPIPB3-213ENST00000544154 IQGAP2Q13576 1575 aa0.67□□□□□ -2.3
NPIPB3-213ENST00000544154 NDUFA4O00483 81 aa0.67□□□□□ -2.3
NPIPB3-213ENST00000544154 MRPL33O75394 65 aaKnown RBP0.67□□□□□ -2.3
NPIPB3-213ENST00000544154 KRTAP6-3Q3LI67 103 aa0.67□□□□□ -2.3
NPIPB3-213ENST00000544154 Q8IZM0 81 aa0.67□□□□□ -2.3
NPIPB3-213ENST00000544154 ZNF831Q5JPB2 1677 aa0.67□□□□□ -2.3
NPIPB3-213ENST00000544154 ALS2Q96Q42 1657 aa0.67□□□□□ -2.3
NPIPB3-213ENST00000544154 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.67□□□□□ -2.3
NPIPB3-213ENST00000544154 TRPM2O94759 1503 aa0.67□□□□□ -2.3
NPIPB3-213ENST00000544154 OTOGQ6ZRI0 2925 aa0.67□□□□□ -2.3
NPIPB3-213ENST00000544154 NBPF19A0A087WUL8 3843 aa0.67□□□□□ -2.3
NPIPB3-213ENST00000544154 TENM2Q9NT68 2774 aa0.67□□□□□ -2.3
NPIPB3-213ENST00000544154 FRYLO94915 3013 aa0.67□□□□□ -2.3
NPIPB3-213ENST00000544154 CRYBG3Q68DQ2 2970 aa0.66□□□□□ -2.3
NPIPB3-213ENST00000544154 TENM3Q9P273 2699 aa0.66□□□□□ -2.3
NPIPB3-213ENST00000544154 ACANP16112 2415 aa0.66□□□□□ -2.3
NPIPB3-213ENST00000544154 ANKRD50Q9ULJ7 1429 aa0.66□□□□□ -2.3
NPIPB3-213ENST00000544154 URB1O60287 2271 aaKnown RBP0.66□□□□□ -2.3
NPIPB3-213ENST00000544154 NEBP20929 6669 aa0.66□□□□□ -2.3
NPIPB3-213ENST00000544154 NBASA2RRP1 2371 aa0.66□□□□□ -2.3
NPIPB3-213ENST00000544154 LINC01549A6NIU2 74 aa0.66□□□□□ -2.3
NPIPB3-213ENST00000544154 CPSF4LA6NMK7 179 aaKnown RBP0.66□□□□□ -2.3
NPIPB3-213ENST00000544154 CCL22O00626 93 aa0.66□□□□□ -2.3
NPIPB3-213ENST00000544154 ENHOQ6UWT2 76 aa0.66□□□□□ -2.3
NPIPB3-213ENST00000544154 EIF2AK4Q9P2K8 1649 aaKnown RBP0.66□□□□□ -2.3
NPIPB3-213ENST00000544154 ROS1P08922 2347 aa0.66□□□□□ -2.3
NPIPB3-213ENST00000544154 TOGARAM1Q9Y4F4 1720 aa0.66□□□□□ -2.3
NPIPB3-213ENST00000544154 LRBAP50851 2863 aa0.66□□□□□ -2.3
NPIPB3-213ENST00000544154 COL12A1Q99715 3063 aa0.66□□□□□ -2.3
NPIPB3-213ENST00000544154 CACNA1EQ15878 2313 aa0.65□□□□□ -2.3
NPIPB3-213ENST00000544154 CHD7Q9P2D1 2997 aa0.65□□□□□ -2.31
NPIPB3-213ENST00000544154 COX6B1P14854 86 aa0.65□□□□□ -2.31
NPIPB3-213ENST00000544154 SERF2P84101 59 aa0.65□□□□□ -2.31
NPIPB3-213ENST00000544154 C10orf95Q9H7T3 257 aa0.65□□□□□ -2.31
NPIPB3-213ENST00000544154 SSPOA2VEC9 5147 aa0.65□□□□□ -2.31
NPIPB3-213ENST00000544154 PRRC2CQ9Y520 2896 aaKnown RBP0.65□□□□□ -2.31
NPIPB3-213ENST00000544154 LMO7Q8WWI1 1683 aa0.65□□□□□ -2.31
NPIPB3-213ENST00000544154 FREM2Q5SZK8 3169 aa0.65□□□□□ -2.31
NPIPB3-213ENST00000544154 BCORQ6W2J9 1755 aa0.65□□□□□ -2.31
NPIPB3-213ENST00000544154 COL6A6A6NMZ7 2263 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms