RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 UNC79Q9P2D8 2635 aa3.15□□□□□ -1.91
LMO3-229ENST00000543721 COL12A1Q99715 3063 aa3.15□□□□□ -1.91
LMO3-229ENST00000543721 MOBPQ13875 183 aa3.14□□□□□ -1.91
LMO3-229ENST00000543721 LINC00472Q9H8W2 130 aa3.14□□□□□ -1.91
LMO3-229ENST00000543721 CELSR1Q9NYQ6 3014 aa3.14□□□□□ -1.91
LMO3-229ENST00000543721 A8MU10 97 aa3.14□□□□□ -1.91
LMO3-229ENST00000543721 ASB16-AS1Q495Z4 193 aa3.14□□□□□ -1.91
LMO3-229ENST00000543721 ASH1LQ9NR48 2969 aaKnown RBP3.14□□□□□ -1.91
LMO3-229ENST00000543721 A0A087X002 238 aa3.14□□□□□ -1.91
LMO3-229ENST00000543721 FAM168BA1KXE4 195 aa3.14□□□□□ -1.91
LMO3-229ENST00000543721 H0Y9J4 135 aa3.14□□□□□ -1.91
LMO3-229ENST00000543721 RPL37AP61513 92 aaKnown RBP3.14□□□□□ -1.91
LMO3-229ENST00000543721 KRTAP10-3P60369 221 aa3.13□□□□□ -1.91
LMO3-229ENST00000543721 KRTAP1-1Q07627 177 aa3.13□□□□□ -1.91
LMO3-229ENST00000543721 DEFB131BA0A096LNP1 70 aa3.13□□□□□ -1.91
LMO3-229ENST00000543721 CHD6Q8TD26 2715 aa3.13□□□□□ -1.91
LMO3-229ENST00000543721 MMP24-AS1A0A0U1RRL7 71 aa3.13□□□□□ -1.91
LMO3-229ENST00000543721 MGAM2Q2M2H8 2515 aa3.12□□□□□ -1.91
LMO3-229ENST00000543721 Q6ZR54 194 aa3.12□□□□□ -1.91
LMO3-229ENST00000543721 KRTAP7-1Q8IUC3 87 aa3.12□□□□□ -1.91
LMO3-229ENST00000543721 SPAG11AQ6PDA7 123 aa3.12□□□□□ -1.91
LMO3-229ENST00000543721 AKAP9Q99996 3911 aa3.11□□□□□ -1.91
LMO3-229ENST00000543721 F8P00451 2351 aa3.11□□□□□ -1.91
LMO3-229ENST00000543721 PCOTHQ58A44 107 aa3.11□□□□□ -1.91
LMO3-229ENST00000543721 PRLHP81277 87 aa3.1□□□□□ -1.91
LMO3-229ENST00000543721 CDK2AP2O75956 126 aa3.1□□□□□ -1.91
LMO3-229ENST00000543721 LAMA5O15230 3695 aa3.1□□□□□ -1.91
LMO3-229ENST00000543721 SVEP1Q4LDE5 3571 aa3.1□□□□□ -1.91
LMO3-229ENST00000543721 IGKV2-24A0A0C4DH68 120 aa3.1□□□□□ -1.91
LMO3-229ENST00000543721 A0A0G2JQZ4 141 aa3.1□□□□□ -1.91
LMO3-229ENST00000543721 A0A1W2PNN7 141 aa3.1□□□□□ -1.91
LMO3-229ENST00000543721 C8orf17Q9NRJ1 99 aa3.09□□□□□ -1.91
LMO3-229ENST00000543721 HRES1P13985 223 aa3.09□□□□□ -1.92
LMO3-229ENST00000543721 C14orf177Q52M58 125 aa3.09□□□□□ -1.92
LMO3-229ENST00000543721 ZFHX3Q15911 3703 aa3.09□□□□□ -1.92
LMO3-229ENST00000543721 ITPR1Q14643 2758 aa3.08□□□□□ -1.92
LMO3-229ENST00000543721 ACYP2P14621 99 aa3.08□□□□□ -1.92
LMO3-229ENST00000543721 SPINK7P58062 85 aa3.08□□□□□ -1.92
LMO3-229ENST00000543721 NOTCH1P46531 2555 aa3.08□□□□□ -1.92
LMO3-229ENST00000543721 C8orf87E5RJ46 101 aa3.08□□□□□ -1.92
LMO3-229ENST00000543721 PLA2G1BP04054 148 aaKnown RBP3.08□□□□□ -1.92
LMO3-229ENST00000543721 MRPL34Q9BQ48 92 aaKnown RBP3.07□□□□□ -1.92
LMO3-229ENST00000543721 MXRA5Q9NR99 2828 aa3.07□□□□□ -1.92
LMO3-229ENST00000543721 RELNP78509 3460 aa3.07□□□□□ -1.92
LMO3-229ENST00000543721 A0A1B0GVX0 72 aa3.07□□□□□ -1.92
LMO3-229ENST00000543721 HUWE1Q7Z6Z7 4374 aaKnown RBP3.07□□□□□ -1.92
LMO3-229ENST00000543721 A0A096LNI7 61 aa3.06□□□□□ -1.92
LMO3-229ENST00000543721 NBEAL1Q6ZS30 2694 aa3.06□□□□□ -1.92
LMO3-229ENST00000543721 TEX15Q9BXT5 2789 aa3.06□□□□□ -1.92
LMO3-229ENST00000543721 LINC00313P59037 77 aa3.06□□□□□ -1.92
LMO3-229ENST00000543721 CASC10Q5T4H9 136 aa3.06□□□□□ -1.92
LMO3-229ENST00000543721 CRYBG3Q68DQ2 2970 aa3.06□□□□□ -1.92
LMO3-229ENST00000543721 ZNF706Q9Y5V0 76 aaPredicted RBP3.05□□□□□ -1.92
LMO3-229ENST00000543721 LINC01554Q52M75 96 aa3.05□□□□□ -1.92
LMO3-229ENST00000543721 ZANQ9Y493 2812 aa3.04□□□□□ -1.92
LMO3-229ENST00000543721 Q96NJ1 140 aa3.04□□□□□ -1.92
LMO3-229ENST00000543721 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.04□□□□□ -1.92
LMO3-229ENST00000543721 IGHV6-1A0A0B4J1U7 121 aa3.04□□□□□ -1.92
LMO3-229ENST00000543721 SPATA8Q6RVD6 105 aa3.04□□□□□ -1.92
LMO3-229ENST00000543721 A0A1B0GU69 56 aa3.03□□□□□ -1.92
LMO3-229ENST00000543721 APCP25054 2843 aa3.03□□□□□ -1.92
LMO3-229ENST00000543721 CMYA5Q8N3K9 4069 aa3.03□□□□□ -1.92
LMO3-229ENST00000543721 GCN1Q92616 2671 aaKnown RBP3.02□□□□□ -1.93
LMO3-229ENST00000543721 RETNLBQ9BQ08 111 aa3.02□□□□□ -1.93
LMO3-229ENST00000543721 UQCR11O14957 56 aa3.02□□□□□ -1.93
LMO3-229ENST00000543721 UTP20O75691 2785 aaKnown RBP3.02□□□□□ -1.93
LMO3-229ENST00000543721 CFAP46Q8IYW2 2715 aa3.02□□□□□ -1.93
LMO3-229ENST00000543721 LINC00483Q53H64 154 aa3.01□□□□□ -1.93
LMO3-229ENST00000543721 DMAC1Q96GE9 116 aa3.01□□□□□ -1.93
LMO3-229ENST00000543721 KRTAP13-1Q8IUC0 172 aa3.01□□□□□ -1.93
LMO3-229ENST00000543721 CELSR2Q9HCU4 2923 aa3.01□□□□□ -1.93
LMO3-229ENST00000543721 RTL8CO15255 209 aa3.01□□□□□ -1.93
LMO3-229ENST00000543721 IGLV9-49A0A0B4J1Y8 123 aa3□□□□□ -1.93
LMO3-229ENST00000543721 MIR22HGQ0VDD5 57 aa3□□□□□ -1.93
LMO3-229ENST00000543721 HELZ2Q9BYK8 2649 aaKnown RBP3□□□□□ -1.93
LMO3-229ENST00000543721 KRTAP10-11P60412 298 aa3□□□□□ -1.93
LMO3-229ENST00000543721 FBN2P35556 2912 aa3□□□□□ -1.93
LMO3-229ENST00000543721 VPS13CQ709C8 3753 aa2.99□□□□□ -1.93
LMO3-229ENST00000543721 PRAC1Q96KF2 57 aa2.99□□□□□ -1.93
LMO3-229ENST00000543721 NBEAL2Q6ZNJ1 2754 aa2.99□□□□□ -1.93
LMO3-229ENST00000543721 SMR3AQ99954 134 aa2.99□□□□□ -1.93
LMO3-229ENST00000543721 INAFM1C9JVW0 142 aa2.98□□□□□ -1.93
LMO3-229ENST00000543721 KRTAP13-3Q3SY46 172 aa2.98□□□□□ -1.93
LMO3-229ENST00000543721 KRTAP11-1Q8IUC1 163 aa2.98□□□□□ -1.93
LMO3-229ENST00000543721 FLNAP21333 2647 aaKnown RBP2.98□□□□□ -1.93
LMO3-229ENST00000543721 STAB1Q9NY15 2570 aa2.98□□□□□ -1.93
LMO3-229ENST00000543721 HECTD4Q9Y4D8 3996 aa2.98□□□□□ -1.93
LMO3-229ENST00000543721 FLNCQ14315 2725 aa2.98□□□□□ -1.93
LMO3-229ENST00000543721 PRKDCP78527 4128 aaKnown RBP2.97□□□□□ -1.93
LMO3-229ENST00000543721 CHTF8P0CG12 524 aa2.97□□□□□ -1.93
LMO3-229ENST00000543721 UBE2DNLQ8IWF7 75 aa2.97□□□□□ -1.93
LMO3-229ENST00000543721 WWC2-AS2Q96NR7 200 aa2.97□□□□□ -1.93
LMO3-229ENST00000543721 COL6A5A8TX70 2615 aa2.96□□□□□ -1.93
LMO3-229ENST00000543721 NBPF19A0A087WUL8 3843 aa2.95□□□□□ -1.94
LMO3-229ENST00000543721 Q5W150 140 aa2.95□□□□□ -1.94
LMO3-229ENST00000543721 IGSF10Q6WRI0 2623 aa2.95□□□□□ -1.94
LMO3-229ENST00000543721 ADM2Q7Z4H4 148 aa2.95□□□□□ -1.94
LMO3-229ENST00000543721 IGKV2-30P06310 120 aa2.94□□□□□ -1.94
LMO3-229ENST00000543721 NF1P21359 2839 aa2.94□□□□□ -1.94
LMO3-229ENST00000543721 J3QKU1 62 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms