RNA–Protein interactions for RNA: ENST00000543469.1

TRIM59-208, Transcript of tripartite motif containing 59, humanhuman

TSL 5 BASIC

Gene TRIM59, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-208ENST00000543469 KRTAP13-1Q8IUC0 172 aa4.86□□□□□ -1.63
TRIM59-208ENST00000543469 NBEAL1Q6ZS30 2694 aa4.86□□□□□ -1.63
TRIM59-208ENST00000543469 A8MWP4 228 aa4.85□□□□□ -1.63
TRIM59-208ENST00000543469 FAM30AQ9NZY2 134 aa4.85□□□□□ -1.63
TRIM59-208ENST00000543469 FAM236AA0A1B0GUQ0 79 aa4.85□□□□□ -1.63
TRIM59-208ENST00000543469 FAM236BA0A1B0GV22 79 aa4.85□□□□□ -1.63
TRIM59-208ENST00000543469 OXTP01178 125 aa4.85□□□□□ -1.63
TRIM59-208ENST00000543469 NBEAL2Q6ZNJ1 2754 aa4.85□□□□□ -1.63
TRIM59-208ENST00000543469 HCG22E2RYF7 251 aa4.85□□□□□ -1.63
TRIM59-208ENST00000543469 PANO1I0J062 215 aa4.85□□□□□ -1.63
TRIM59-208ENST00000543469 A0A1B0GVY2 172 aa4.84□□□□□ -1.63
TRIM59-208ENST00000543469 CASC2Q6XLA1 102 aa4.84□□□□□ -1.63
TRIM59-208ENST00000543469 KRTAP7-1Q8IUC3 87 aa4.84□□□□□ -1.64
TRIM59-208ENST00000543469 IGHV6-1A0A0B4J1U7 121 aa4.82□□□□□ -1.64
TRIM59-208ENST00000543469 UQCRQO14949 82 aa4.82□□□□□ -1.64
TRIM59-208ENST00000543469 NDUFC1O43677 76 aa4.82□□□□□ -1.64
TRIM59-208ENST00000543469 H3BPC8 53 aa4.82□□□□□ -1.64
TRIM59-208ENST00000543469 MT-ATP8P03928 68 aa4.82□□□□□ -1.64
TRIM59-208ENST00000543469 SMIM29Q86T20 159 aa4.82□□□□□ -1.64
TRIM59-208ENST00000543469 A0A1W2PNM2 257 aa4.82□□□□□ -1.64
TRIM59-208ENST00000543469 Q8N1X5 172 aa4.82□□□□□ -1.64
TRIM59-208ENST00000543469 STAB2Q8WWQ8 2551 aa4.81□□□□□ -1.64
TRIM59-208ENST00000543469 TRAV7A0A075B6U4 112 aa4.81□□□□□ -1.64
TRIM59-208ENST00000543469 LINC00313P59037 77 aa4.81□□□□□ -1.64
TRIM59-208ENST00000543469 ASB16-AS1Q495Z4 193 aa4.81□□□□□ -1.64
TRIM59-208ENST00000543469 CELSR1Q9NYQ6 3014 aa4.8□□□□□ -1.64
TRIM59-208ENST00000543469 SERP2Q8N6R1 65 aa4.8□□□□□ -1.64
TRIM59-208ENST00000543469 Q5XG85 94 aa4.8□□□□□ -1.64
TRIM59-208ENST00000543469 FP248Q71RG6 208 aaPredicted RBP4.8□□□□□ -1.64
TRIM59-208ENST00000543469 TMEM254Q8TBM7 123 aa4.8□□□□□ -1.64
TRIM59-208ENST00000543469 CDIP1Q9H305 208 aa4.8□□□□□ -1.64
TRIM59-208ENST00000543469 A0A1B0GVX0 72 aa4.79□□□□□ -1.64
TRIM59-208ENST00000543469 C5orf47Q569G3 176 aa4.79□□□□□ -1.64
TRIM59-208ENST00000543469 hDV103S1A0JD37 113 aa4.79□□□□□ -1.64
TRIM59-208ENST00000543469 WFDC13Q8IUB5 93 aa4.79□□□□□ -1.64
TRIM59-208ENST00000543469 PRR15Q8IV56 129 aa4.79□□□□□ -1.64
TRIM59-208ENST00000543469 ATP5EP56381 51 aaPredicted RBP4.78□□□□□ -1.64
TRIM59-208ENST00000543469 PRR26Q8N8Z3 221 aa4.77□□□□□ -1.65
TRIM59-208ENST00000543469 PCP4P48539 62 aa4.77□□□□□ -1.65
TRIM59-208ENST00000543469 ALMS1Q8TCU4 4167 aa4.76□□□□□ -1.65
TRIM59-208ENST00000543469 MRPL34Q9BQ48 92 aaKnown RBP4.76□□□□□ -1.65
TRIM59-208ENST00000543469 C8orf17Q9NRJ1 99 aa4.76□□□□□ -1.65
TRIM59-208ENST00000543469 ANAPC11Q9NYG5 84 aa4.74□□□□□ -1.65
TRIM59-208ENST00000543469 VWFP04275 2813 aa4.74□□□□□ -1.65
TRIM59-208ENST00000543469 COX7CP15954 63 aa4.74□□□□□ -1.65
TRIM59-208ENST00000543469 KRTAP11-1Q8IUC1 163 aa4.73□□□□□ -1.65
TRIM59-208ENST00000543469 TENM3Q9P273 2699 aa4.73□□□□□ -1.65
TRIM59-208ENST00000543469 ANK2Q01484 3957 aa4.73□□□□□ -1.65
TRIM59-208ENST00000543469 PRR4Q16378 134 aa4.71□□□□□ -1.66
TRIM59-208ENST00000543469 ATP11AUNQ6ZP68 121 aa4.71□□□□□ -1.66
TRIM59-208ENST00000543469 LINC00472Q9H8W2 130 aa4.71□□□□□ -1.66
TRIM59-208ENST00000543469 HUWE1Q7Z6Z7 4374 aaKnown RBP4.71□□□□□ -1.66
TRIM59-208ENST00000543469 CSMD1Q96PZ7 3565 aa4.71□□□□□ -1.66
TRIM59-208ENST00000543469 LOC101927531A0A1B0GV80 90 aa4.71□□□□□ -1.66
TRIM59-208ENST00000543469 DEFB116Q30KQ4 102 aa4.71□□□□□ -1.66
TRIM59-208ENST00000543469 CSMD2Q7Z408 3487 aa4.7□□□□□ -1.66
TRIM59-208ENST00000543469 ZNF469Q96JG9 3925 aaPredicted RBP4.7□□□□□ -1.66
TRIM59-208ENST00000543469 H0Y9P7 68 aa4.7□□□□□ -1.66
TRIM59-208ENST00000543469 K7EQZ3 153 aa4.7□□□□□ -1.66
TRIM59-208ENST00000543469 Q96NJ1 140 aa4.7□□□□□ -1.66
TRIM59-208ENST00000543469 IGLV7-46A0A075B6I9 117 aa4.69□□□□□ -1.66
TRIM59-208ENST00000543469 SPTSSBQ8NFR3 76 aa4.69□□□□□ -1.66
TRIM59-208ENST00000543469 SVEP1Q4LDE5 3571 aa4.69□□□□□ -1.66
TRIM59-208ENST00000543469 TRAV22A0A0B4J277 110 aa4.68□□□□□ -1.66
TRIM59-208ENST00000543469 A0A087WVE0 104 aa4.68□□□□□ -1.66
TRIM59-208ENST00000543469 C20orf197Q8N268 126 aa4.67□□□□□ -1.66
TRIM59-208ENST00000543469 DNAH9Q9NYC9 4486 aa4.67□□□□□ -1.66
TRIM59-208ENST00000543469 DNAH3Q8TD57 4116 aa4.66□□□□□ -1.66
TRIM59-208ENST00000543469 CHKB-CPT1BH3BT56 60 aa4.66□□□□□ -1.66
TRIM59-208ENST00000543469 A0A087X002 238 aa4.66□□□□□ -1.66
TRIM59-208ENST00000543469 TMEM258P61165 79 aa4.66□□□□□ -1.66
TRIM59-208ENST00000543469 DSCR10P59022 87 aa4.66□□□□□ -1.66
TRIM59-208ENST00000543469 C1orf195Q5TG92 126 aa4.66□□□□□ -1.66
TRIM59-208ENST00000543469 Q8N9L7 120 aa4.65□□□□□ -1.66
TRIM59-208ENST00000543469 FBN3Q75N90 2809 aa4.65□□□□□ -1.66
TRIM59-208ENST00000543469 LINC00208Q96KT6 92 aa4.65□□□□□ -1.66
TRIM59-208ENST00000543469 KRTAP13-2Q52LG2 175 aa4.65□□□□□ -1.67
TRIM59-208ENST00000543469 KRTAP1-4P0C5Y4 121 aa4.64□□□□□ -1.67
TRIM59-208ENST00000543469 C1orf64Q8NEQ6 169 aa4.64□□□□□ -1.67
TRIM59-208ENST00000543469 A0A0G2JQZ4 141 aa4.63□□□□□ -1.67
TRIM59-208ENST00000543469 KRTAP29-1A8MX34 341 aaPredicted RBP4.62□□□□□ -1.67
TRIM59-208ENST00000543469 MMP24-AS1A0A0U1RRL7 71 aa4.61□□□□□ -1.67
TRIM59-208ENST00000543469 FAM236DA0A1B0GTK5 79 aa4.61□□□□□ -1.67
TRIM59-208ENST00000543469 FAM236CP0DP71 79 aa4.61□□□□□ -1.67
TRIM59-208ENST00000543469 SEC61BP60468 96 aaKnown RBP4.61□□□□□ -1.67
TRIM59-208ENST00000543469 C7orf65Q6ZTY9 151 aa4.61□□□□□ -1.67
TRIM59-208ENST00000543469 TRRAPQ9Y4A5 3859 aa4.59□□□□□ -1.68
TRIM59-208ENST00000543469 V9GYY9 64 aa4.58□□□□□ -1.68
TRIM59-208ENST00000543469 ZFHX3Q15911 3703 aa4.58□□□□□ -1.68
TRIM59-208ENST00000543469 PKD1L1Q8TDX9 2849 aa4.58□□□□□ -1.68
TRIM59-208ENST00000543469 IGKV2D-30A0A075B6S6 120 aa4.57□□□□□ -1.68
TRIM59-208ENST00000543469 IGKV2-30P06310 120 aa4.57□□□□□ -1.68
TRIM59-208ENST00000543469 SEC61GP60059 68 aa4.57□□□□□ -1.68
TRIM59-208ENST00000543469 ZCCHC13Q8WW36 166 aaKnown RBP4.57□□□□□ -1.68
TRIM59-208ENST00000543469 C9orf92A6NGG3 77 aa4.57□□□□□ -1.68
TRIM59-208ENST00000543469 VPS13CQ709C8 3753 aa4.57□□□□□ -1.68
TRIM59-208ENST00000543469 DNAH6Q9C0G6 4158 aa4.56□□□□□ -1.68
TRIM59-208ENST00000543469 ACYP2P14621 99 aa4.55□□□□□ -1.68
TRIM59-208ENST00000543469 KRTAP10-8P60410 259 aa4.55□□□□□ -1.68
TRIM59-208ENST00000543469 KLKP1Q107X0 134 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 495.4 ms