RNA–Protein interactions for RNA: ENST00000543368.1

NPIPB3-212, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 3

Gene NPIPB3, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-212ENST00000543368 VAMP8Q9BV40 100 aa5.76□□□□□ -1.49
NPIPB3-212ENST00000543368 RNF213Q63HN8 5207 aa5.76□□□□□ -1.49
NPIPB3-212ENST00000543368 SPATA45Q537H7 98 aa5.75□□□□□ -1.49
NPIPB3-212ENST00000543368 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.75□□□□□ -1.49
NPIPB3-212ENST00000543368 SMIM29Q86T20 159 aa5.75□□□□□ -1.49
NPIPB3-212ENST00000543368 RAB37Q96AX2 223 aa5.75□□□□□ -1.49
NPIPB3-212ENST00000543368 TMEM238LA0A1B0GVL6 79 aa5.74□□□□□ -1.49
NPIPB3-212ENST00000543368 GHRHP01286 108 aa5.74□□□□□ -1.49
NPIPB3-212ENST00000543368 ASB16-AS1Q495Z4 193 aa5.74□□□□□ -1.49
NPIPB3-212ENST00000543368 Q6JHZ5 121 aa5.74□□□□□ -1.49
NPIPB3-212ENST00000543368 HRCT1Q6UXD1 115 aa5.74□□□□□ -1.49
NPIPB3-212ENST00000543368 TCL1BO95988 128 aa5.73□□□□□ -1.49
NPIPB3-212ENST00000543368 OCIAD2Q56VL3 154 aa5.73□□□□□ -1.49
NPIPB3-212ENST00000543368 Q6ZQY7 126 aa5.73□□□□□ -1.49
NPIPB3-212ENST00000543368 PAM16Q9Y3D7 125 aa5.73□□□□□ -1.49
NPIPB3-212ENST00000543368 A0A0B4J2C4 111 aa5.72□□□□□ -1.49
NPIPB3-212ENST00000543368 H0YGX0 51 aa5.72□□□□□ -1.49
NPIPB3-212ENST00000543368 C14orf144Q96I85 54 aa5.72□□□□□ -1.49
NPIPB3-212ENST00000543368 C12orf57Q99622 126 aa5.71□□□□□ -1.5
NPIPB3-212ENST00000543368 IGLV8-61A0A075B6I0 122 aa5.7□□□□□ -1.5
NPIPB3-212ENST00000543368 CFC1BP0CG36 223 aa5.7□□□□□ -1.5
NPIPB3-212ENST00000543368 CFC1P0CG37 223 aa5.7□□□□□ -1.5
NPIPB3-212ENST00000543368 SNHG12Q9BXW3 62 aa5.7□□□□□ -1.5
NPIPB3-212ENST00000543368 A0A1B0GX51 115 aa5.69□□□□□ -1.5
NPIPB3-212ENST00000543368 CEND1Q8N111 149 aa5.69□□□□□ -1.5
NPIPB3-212ENST00000543368 CLEC2BQ92478 149 aa5.69□□□□□ -1.5
NPIPB3-212ENST00000543368 KRTAP4-8Q9BYQ9 185 aa5.68□□□□□ -1.5
NPIPB3-212ENST00000543368 PRO1854Q9UHT4 67 aa5.67□□□□□ -1.5
NPIPB3-212ENST00000543368 H3BQ85 93 aa5.66□□□□□ -1.5
NPIPB3-212ENST00000543368 C1orf195Q5TG92 126 aa5.66□□□□□ -1.5
NPIPB3-212ENST00000543368 C2orf91Q6ZV80 131 aa5.66□□□□□ -1.5
NPIPB3-212ENST00000543368 TRBV7-7A0A0K0K1E9 115 aa5.65□□□□□ -1.5
NPIPB3-212ENST00000543368 HSD52Q0P140 79 aa5.64□□□□□ -1.51
NPIPB3-212ENST00000543368 IGFL1Q6UW32 110 aa5.64□□□□□ -1.51
NPIPB3-212ENST00000543368 COX6CP09669 75 aa5.63□□□□□ -1.51
NPIPB3-212ENST00000543368 SS18L2Q9UHA2 77 aa5.63□□□□□ -1.51
NPIPB3-212ENST00000543368 C9orf92A6NGG3 77 aa5.62□□□□□ -1.51
NPIPB3-212ENST00000543368 PYY3Q5JQD4 70 aa5.62□□□□□ -1.51
NPIPB3-212ENST00000543368 UQCR10Q9UDW1 63 aa5.62□□□□□ -1.51
NPIPB3-212ENST00000543368 A0A0G2JQZ4 141 aa5.61□□□□□ -1.51
NPIPB3-212ENST00000543368 DNAL4O96015 105 aa5.61□□□□□ -1.51
NPIPB3-212ENST00000543368 FXYD2P54710 66 aa5.61□□□□□ -1.51
NPIPB3-212ENST00000543368 Q6Q795 121 aa5.61□□□□□ -1.51
NPIPB3-212ENST00000543368 MUC17Q685J3 4493 aa5.6□□□□□ -1.51
NPIPB3-212ENST00000543368 LST1O00453 97 aa5.6□□□□□ -1.51
NPIPB3-212ENST00000543368 NDUFV3P56181 108 aaKnown RBP5.6□□□□□ -1.51
NPIPB3-212ENST00000543368 TEN1Q86WV5 123 aa5.6□□□□□ -1.51
NPIPB3-212ENST00000543368 PSMB2P49721 201 aa5.59□□□□□ -1.51
NPIPB3-212ENST00000543368 MUC2Q02817 5179 aa5.58□□□□□ -1.52
NPIPB3-212ENST00000543368 H3BUT2 72 aa5.58□□□□□ -1.52
NPIPB3-212ENST00000543368 TRIAP1O43715 76 aa5.58□□□□□ -1.52
NPIPB3-212ENST00000543368 FABP2P12104 132 aa5.58□□□□□ -1.52
NPIPB3-212ENST00000543368 FAM218AQ96MZ4 157 aa5.58□□□□□ -1.52
NPIPB3-212ENST00000543368 KRTAP9-2Q9BYQ4 174 aa5.58□□□□□ -1.52
NPIPB3-212ENST00000543368 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.57□□□□□ -1.52
NPIPB3-212ENST00000543368 H3BMG7 143 aa5.57□□□□□ -1.52
NPIPB3-212ENST00000543368 RPL37P61927 97 aaKnown RBP5.57□□□□□ -1.52
NPIPB3-212ENST00000543368 PCOTHQ58A44 107 aa5.57□□□□□ -1.52
NPIPB3-212ENST00000543368 ORMDL1Q9P0S3 153 aa5.57□□□□□ -1.52
NPIPB3-212ENST00000543368 TMA7Q9Y2S6 64 aaKnown RBP5.57□□□□□ -1.52
NPIPB3-212ENST00000543368 TMEM256-PLSCR3K7ERE1 68 aa5.56□□□□□ -1.52
NPIPB3-212ENST00000543368 KRTAP9-6A0A140TA67 174 aa5.54□□□□□ -1.52
NPIPB3-212ENST00000543368 KRTAP4-1Q9BYQ7 146 aa5.54□□□□□ -1.52
NPIPB3-212ENST00000543368 ANKRD29Q8N6D5 301 aa5.53□□□□□ -1.52
NPIPB3-212ENST00000543368 A0A087WSZ3 146 aa5.52□□□□□ -1.53
NPIPB3-212ENST00000543368 TRACP01848 142 aa5.52□□□□□ -1.53
NPIPB3-212ENST00000543368 SCGB1C2P0DMR2 95 aa5.52□□□□□ -1.53
NPIPB3-212ENST00000543368 UBE2V1Q13404 147 aa5.52□□□□□ -1.53
NPIPB3-212ENST00000543368 TRBV7-4A0A0J9YYF1 115 aa5.51□□□□□ -1.53
NPIPB3-212ENST00000543368 K7ERJ3 54 aa5.51□□□□□ -1.53
NPIPB3-212ENST00000543368 M0R143 59 aa5.51□□□□□ -1.53
NPIPB3-212ENST00000543368 C21orf62-AS1Q17RA5 79 aa5.51□□□□□ -1.53
NPIPB3-212ENST00000543368 ATP11AUNQ6ZP68 121 aa5.51□□□□□ -1.53
NPIPB3-212ENST00000543368 Q75L30 129 aa5.51□□□□□ -1.53
NPIPB3-212ENST00000543368 FAT4Q6V0I7 4981 aa5.5□□□□□ -1.53
NPIPB3-212ENST00000543368 OBSCN-AS1Q96MR7 158 aa5.49□□□□□ -1.53
NPIPB3-212ENST00000543368 A0A1W2PNM2 257 aa5.47□□□□□ -1.53
NPIPB3-212ENST00000543368 SMIM6P0DI80 62 aa5.47□□□□□ -1.53
NPIPB3-212ENST00000543368 Q96NJ1 140 aa5.47□□□□□ -1.53
NPIPB3-212ENST00000543368 CCKP06307 115 aa5.46□□□□□ -1.54
NPIPB3-212ENST00000543368 RBM3P98179 157 aaKnown RBP5.46□□□□□ -1.54
NPIPB3-212ENST00000543368 DSCR8Q96T75 97 aa5.46□□□□□ -1.54
NPIPB3-212ENST00000543368 KRTAP4-12Q9BQ66 201 aa5.46□□□□□ -1.54
NPIPB3-212ENST00000543368 LYRM7Q5U5X0 104 aa5.45□□□□□ -1.54
NPIPB3-212ENST00000543368 SIGMAR1Q99720 223 aa5.45□□□□□ -1.54
NPIPB3-212ENST00000543368 ATXN8Q156A1 80 aa5.44□□□□□ -1.54
NPIPB3-212ENST00000543368 C20orf166-AS1Q96NR2 134 aa5.44□□□□□ -1.54
NPIPB3-212ENST00000543368 IGKV4-1P06312 121 aa5.43□□□□□ -1.54
NPIPB3-212ENST00000543368 BAALC-AS2P0C853 105 aa5.43□□□□□ -1.54
NPIPB3-212ENST00000543368 COX6B2Q6YFQ2 88 aa5.43□□□□□ -1.54
NPIPB3-212ENST00000543368 A8MUU9 505 aa5.42□□□□□ -1.54
NPIPB3-212ENST00000543368 TSTD3H0UI37 97 aa5.42□□□□□ -1.54
NPIPB3-212ENST00000543368 JMJD7-PLA2G4BH0Y9G9 81 aa5.42□□□□□ -1.54
NPIPB3-212ENST00000543368 LINC00313P59037 77 aa5.42□□□□□ -1.54
NPIPB3-212ENST00000543368 A0A1B0GV72 72 aa5.41□□□□□ -1.54
NPIPB3-212ENST00000543368 A0A1B0GW54 56 aa5.41□□□□□ -1.54
NPIPB3-212ENST00000543368 C9JAW5 83 aa5.41□□□□□ -1.54
NPIPB3-212ENST00000543368 LCE3BQ5TA77 95 aa5.41□□□□□ -1.54
NPIPB3-212ENST00000543368 J3KT08 172 aa5.4□□□□□ -1.54
NPIPB3-212ENST00000543368 PDE6GP18545 87 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms