RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 LINC00208Q96KT6 92 aa15.01□□□□□ -0.01
SHD-201ENST00000543264 PRLHP81277 87 aa14.98□□□□□ -0.01
SHD-201ENST00000543264 ANK2Q01484 3957 aa14.97□□□□□ -0.01
SHD-201ENST00000543264 A8MUN3 132 aa14.96□□□□□ -0.01
SHD-201ENST00000543264 LINC00588Q9Y4M8 146 aa14.96□□□□□ -0.01
SHD-201ENST00000543264 B9D2Q9BPU9 175 aa14.94□□□□□ -0.02
SHD-201ENST00000543264 SEC61GP60059 68 aa14.91□□□□□ -0.02
SHD-201ENST00000543264 H0Y9P7 68 aa14.89□□□□□ -0.03
SHD-201ENST00000543264 KRTAP29-1A8MX34 341 aaPredicted RBP14.88□□□□□ -0.03
SHD-201ENST00000543264 IGKV2-24A0A0C4DH68 120 aa14.88□□□□□ -0.03
SHD-201ENST00000543264 PMAIP1Q13794 54 aa14.88□□□□□ -0.03
SHD-201ENST00000543264 CASC2Q6XLA1 102 aa14.87□□□□□ -0.03
SHD-201ENST00000543264 UBE2AP49459 152 aa14.86□□□□□ -0.03
SHD-201ENST00000543264 IGLV8-61A0A075B6I0 122 aa14.86□□□□□ -0.03
SHD-201ENST00000543264 SRRM2Q9UQ35 2752 aaKnown RBP14.83□□□□□ -0.03
SHD-201ENST00000543264 A8MU10 97 aa14.83□□□□□ -0.04
SHD-201ENST00000543264 A0A096LNI7 61 aa14.82□□□□□ -0.04
SHD-201ENST00000543264 Q5VV11 94 aa14.82□□□□□ -0.04
SHD-201ENST00000543264 CNBPP62633 177 aaKnown RBP14.81□□□□□ -0.04
SHD-201ENST00000543264 DNAH1Q9P2D7 4330 aa14.81□□□□□ -0.04
SHD-201ENST00000543264 SPANXA2-OT1Q8N9U9 137 aa14.8□□□□□ -0.04
SHD-201ENST00000543264 Q8N9P0 234 aaPredicted RBP14.77□□□□□ -0.04
SHD-201ENST00000543264 MAST4O15021 2626 aa14.76□□□□□ -0.05
SHD-201ENST00000543264 H3BPC8 53 aa14.76□□□□□ -0.05
SHD-201ENST00000543264 A8MWP4 228 aa14.75□□□□□ -0.05
SHD-201ENST00000543264 C16orf90A8MZG2 172 aa14.74□□□□□ -0.05
SHD-201ENST00000543264 CHKB-CPT1BH3BT56 60 aa14.74□□□□□ -0.05
SHD-201ENST00000543264 LINC00472Q9H8W2 130 aa14.73□□□□□ -0.05
SHD-201ENST00000543264 PRR15LQ9BU68 103 aa14.72□□□□□ -0.05
SHD-201ENST00000543264 NOTCH1P46531 2555 aa14.71□□□□□ -0.05
SHD-201ENST00000543264 KRTAP11-1Q8IUC1 163 aa14.71□□□□□ -0.06
SHD-201ENST00000543264 LIMD2Q9BT23 127 aa14.71□□□□□ -0.06
SHD-201ENST00000543264 H0Y9J4 135 aa14.7□□□□□ -0.06
SHD-201ENST00000543264 C9orf163Q8N9P6 203 aa14.7□□□□□ -0.06
SHD-201ENST00000543264 PHF5AQ7RTV0 110 aaKnown RBP14.69□□□□□ -0.06
SHD-201ENST00000543264 DNAH10Q8IVF4 4471 aa14.67□□□□□ -0.06
SHD-201ENST00000543264 STAB1Q9NY15 2570 aa14.67□□□□□ -0.06
SHD-201ENST00000543264 CHTF8P0CG12 524 aa14.65□□□□□ -0.06
SHD-201ENST00000543264 FBN1P35555 2871 aaKnown RBP14.64□□□□□ -0.07
SHD-201ENST00000543264 COA5Q86WW8 74 aa14.62□□□□□ -0.07
SHD-201ENST00000543264 SPRR1BP22528 89 aa14.62□□□□□ -0.07
SHD-201ENST00000543264 MMP24-AS1A0A0U1RRL7 71 aa14.61□□□□□ -0.07
SHD-201ENST00000543264 CMYA5Q8N3K9 4069 aa14.61□□□□□ -0.07
SHD-201ENST00000543264 KRTAP1-5Q9BYS1 174 aa14.6□□□□□ -0.07
SHD-201ENST00000543264 PCOTHQ58A44 107 aa14.59□□□□□ -0.07
SHD-201ENST00000543264 COL6A5A8TX70 2615 aa14.58□□□□□ -0.08
SHD-201ENST00000543264 SPTSSBQ8NFR3 76 aa14.58□□□□□ -0.08
SHD-201ENST00000543264 IGLV7-46A0A075B6I9 117 aa14.57□□□□□ -0.08
SHD-201ENST00000543264 NBEAL1Q6ZS30 2694 aa14.55□□□□□ -0.08
SHD-201ENST00000543264 CSMD3Q7Z407 3707 aa14.53□□□□□ -0.08
SHD-201ENST00000543264 A6NED7 52 aa14.53□□□□□ -0.08
SHD-201ENST00000543264 LCA10Q71F78 164 aa14.52□□□□□ -0.08
SHD-201ENST00000543264 TENM2Q9NT68 2774 aa14.52□□□□□ -0.09
SHD-201ENST00000543264 Q75L30 129 aa14.51□□□□□ -0.09
SHD-201ENST00000543264 LYSTQ99698 3801 aa14.51□□□□□ -0.09
SHD-201ENST00000543264 LOC101927531A0A1B0GV80 90 aa14.48□□□□□ -0.09
SHD-201ENST00000543264 CD164Q04900 197 aa14.48□□□□□ -0.09
SHD-201ENST00000543264 DNAH3Q8TD57 4116 aa14.47□□□□□ -0.09
SHD-201ENST00000543264 KRTAP24-1Q3LI83 254 aa14.46□□□□□ -0.09
SHD-201ENST00000543264 DNAH9Q9NYC9 4486 aa14.45□□□□□ -0.1
SHD-201ENST00000543264 IGLV9-49A0A0B4J1Y8 123 aa14.45□□□□□ -0.1
SHD-201ENST00000543264 SPAG11AQ6PDA7 123 aa14.45□□□□□ -0.1
SHD-201ENST00000543264 HUWE1Q7Z6Z7 4374 aaKnown RBP14.44□□□□□ -0.1
SHD-201ENST00000543264 Q96NJ1 140 aa14.43□□□□□ -0.1
SHD-201ENST00000543264 ATP11AUNQ6ZP68 121 aa14.42□□□□□ -0.1
SHD-201ENST00000543264 TP53AIP1Q9HCN2 124 aa14.42□□□□□ -0.1
SHD-201ENST00000543264 NDUFS5O43920 106 aa14.42□□□□□ -0.1
SHD-201ENST00000543264 COL7A1Q02388 2944 aa14.42□□□□□ -0.1
SHD-201ENST00000543264 C8orf17Q9NRJ1 99 aa14.39□□□□□ -0.11
SHD-201ENST00000543264 C14orf177Q52M58 125 aa14.39□□□□□ -0.11
SHD-201ENST00000543264 KTN1-AS1Q86SY8 53 aa14.39□□□□□ -0.11
SHD-201ENST00000543264 UBE2DNLQ8IWF7 75 aa14.39□□□□□ -0.11
SHD-201ENST00000543264 ASB16-AS1Q495Z4 193 aa14.38□□□□□ -0.11
SHD-201ENST00000543264 MOBPQ13875 183 aa14.38□□□□□ -0.11
SHD-201ENST00000543264 IGHV6-1A0A0B4J1U7 121 aa14.37□□□□□ -0.11
SHD-201ENST00000543264 PANO1I0J062 215 aa14.36□□□□□ -0.11
SHD-201ENST00000543264 Q6ZR54 194 aa14.35□□□□□ -0.11
SHD-201ENST00000543264 LINC01558Q9Y6Z2 57 aa14.34□□□□□ -0.11
SHD-201ENST00000543264 KRTAP13-1Q8IUC0 172 aa14.34□□□□□ -0.11
SHD-201ENST00000543264 CDC42SE1Q9NRR8 79 aa14.33□□□□□ -0.11
SHD-201ENST00000543264 K7EIL1 84 aa14.31□□□□□ -0.12
SHD-201ENST00000543264 HRES1P13985 223 aa14.3□□□□□ -0.12
SHD-201ENST00000543264 STAB2Q8WWQ8 2551 aa14.29□□□□□ -0.12
SHD-201ENST00000543264 A6NN06 94 aa14.29□□□□□ -0.12
SHD-201ENST00000543264 A0A1B0GVX0 72 aa14.28□□□□□ -0.12
SHD-201ENST00000543264 PLAC8Q9NZF1 115 aa14.28□□□□□ -0.12
SHD-201ENST00000543264 CDK2AP2O75956 126 aa14.27□□□□□ -0.13
SHD-201ENST00000543264 MRPL34Q9BQ48 92 aaKnown RBP14.25□□□□□ -0.13
SHD-201ENST00000543264 SPINK7P58062 85 aa14.24□□□□□ -0.13
SHD-201ENST00000543264 A0A087X002 238 aa14.24□□□□□ -0.13
SHD-201ENST00000543264 NOTCH2NLQ7Z3S9 236 aa14.24□□□□□ -0.13
SHD-201ENST00000543264 RBM12B-AS1Q9P1G2 102 aa14.24□□□□□ -0.13
SHD-201ENST00000543264 APLNQ9ULZ1 77 aa14.2□□□□□ -0.14
SHD-201ENST00000543264 ANAPC11Q9NYG5 84 aa14.18□□□□□ -0.14
SHD-201ENST00000543264 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.18□□□□□ -0.14
SHD-201ENST00000543264 DNAH7Q8WXX0 4024 aa14.16□□□□□ -0.14
SHD-201ENST00000543264 LINC00483Q53H64 154 aa14.16□□□□□ -0.14
SHD-201ENST00000543264 PRR26Q8N8Z3 221 aa14.14□□□□□ -0.15
SHD-201ENST00000543264 WWC2-AS2Q96NR7 200 aa14.14□□□□□ -0.15
SHD-201ENST00000543264 MGAM2Q2M2H8 2515 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms