RNA–Protein interactions for RNA: ENST00000542841.1

SRGAP1-205, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 836 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-205ENST00000542841 Q6ZQY7 126 aa7.07□□□□□ -1.28
SRGAP1-205ENST00000542841 KRTAP11-1Q8IUC1 163 aa7.07□□□□□ -1.28
SRGAP1-205ENST00000542841 Q9BRP9 147 aa7.07□□□□□ -1.28
SRGAP1-205ENST00000542841 UBE2AP49459 152 aa7.06□□□□□ -1.28
SRGAP1-205ENST00000542841 ETDBQ3ZM63 59 aa7.05□□□□□ -1.28
SRGAP1-205ENST00000542841 KRTAP13-1Q8IUC0 172 aa7.05□□□□□ -1.28
SRGAP1-205ENST00000542841 SMCR5Q8TEV8 140 aa7.05□□□□□ -1.28
SRGAP1-205ENST00000542841 PSORS1C2Q9UIG4 136 aa7.05□□□□□ -1.28
SRGAP1-205ENST00000542841 IGLV5-48A0A075B6I7 105 aa7.04□□□□□ -1.28
SRGAP1-205ENST00000542841 JMJD7-PLA2G4BH0Y9G9 81 aa7.04□□□□□ -1.28
SRGAP1-205ENST00000542841 KRTAP10-8P60410 259 aa7.04□□□□□ -1.28
SRGAP1-205ENST00000542841 PRLHP81277 87 aa7.03□□□□□ -1.28
SRGAP1-205ENST00000542841 C21orf62-AS1Q17RA5 79 aa7.02□□□□□ -1.29
SRGAP1-205ENST00000542841 C1orf137Q5JT78 98 aa7.02□□□□□ -1.29
SRGAP1-205ENST00000542841 SPINK6Q6UWN8 80 aa7.02□□□□□ -1.29
SRGAP1-205ENST00000542841 OBSCN-AS1Q96MR7 158 aa7.02□□□□□ -1.29
SRGAP1-205ENST00000542841 J3QR89 54 aa7.01□□□□□ -1.29
SRGAP1-205ENST00000542841 HIGD2AQ9BW72 106 aa7.01□□□□□ -1.29
SRGAP1-205ENST00000542841 LPAP08519 4548 aa7.01□□□□□ -1.29
SRGAP1-205ENST00000542841 TEX49A0A1B0GTD5 131 aa7□□□□□ -1.29
SRGAP1-205ENST00000542841 ZNF861PO60384 105 aa7□□□□□ -1.29
SRGAP1-205ENST00000542841 LINC01547P58512 204 aaPredicted RBP7□□□□□ -1.29
SRGAP1-205ENST00000542841 KRTAP9-2Q9BYQ4 174 aa7□□□□□ -1.29
SRGAP1-205ENST00000542841 K7ERU9 68 aa6.99□□□□□ -1.29
SRGAP1-205ENST00000542841 ERC2-IT1O76042 136 aa6.99□□□□□ -1.29
SRGAP1-205ENST00000542841 IGLV7-43P04211 117 aa6.99□□□□□ -1.29
SRGAP1-205ENST00000542841 SPRR1BP22528 89 aa6.99□□□□□ -1.29
SRGAP1-205ENST00000542841 Q8N377 158 aa6.99□□□□□ -1.29
SRGAP1-205ENST00000542841 ZNF706Q9Y5V0 76 aaPredicted RBP6.99□□□□□ -1.29
SRGAP1-205ENST00000542841 MUC2Q02817 5179 aa6.98□□□□□ -1.29
SRGAP1-205ENST00000542841 NDUFV3P56181 108 aaKnown RBP6.98□□□□□ -1.29
SRGAP1-205ENST00000542841 LAMTOR3Q9UHA4 124 aa6.98□□□□□ -1.29
SRGAP1-205ENST00000542841 PDE6GP18545 87 aa6.97□□□□□ -1.29
SRGAP1-205ENST00000542841 RBM3P98179 157 aaKnown RBP6.97□□□□□ -1.29
SRGAP1-205ENST00000542841 ST20-AS1Q8NBB2 130 aa6.96□□□□□ -1.3
SRGAP1-205ENST00000542841 DEFB105AQ8NG35 78 aa6.95□□□□□ -1.3
SRGAP1-205ENST00000542841 LOC110117498A0A087WWA1 95 aa6.94□□□□□ -1.3
SRGAP1-205ENST00000542841 DSCR8Q96T75 97 aa6.94□□□□□ -1.3
SRGAP1-205ENST00000542841 A0A0U1RQV1 116 aa6.93□□□□□ -1.3
SRGAP1-205ENST00000542841 FAM240AA0A1B0GVK7 77 aa6.93□□□□□ -1.3
SRGAP1-205ENST00000542841 F8WEM9 126 aa6.93□□□□□ -1.3
SRGAP1-205ENST00000542841 LINC00483Q53H64 154 aa6.93□□□□□ -1.3
SRGAP1-205ENST00000542841 SPRR4Q96PI1 79 aa6.93□□□□□ -1.3
SRGAP1-205ENST00000542841 IGLV8-61A0A075B6I0 122 aa6.92□□□□□ -1.3
SRGAP1-205ENST00000542841 TRBV7-4A0A0J9YYF1 115 aa6.92□□□□□ -1.3
SRGAP1-205ENST00000542841 ACYP1P07311 99 aa6.92□□□□□ -1.3
SRGAP1-205ENST00000542841 SMIM29Q86T20 159 aa6.92□□□□□ -1.3
SRGAP1-205ENST00000542841 C14orf132Q9NPU4 83 aa6.92□□□□□ -1.3
SRGAP1-205ENST00000542841 GAGE2AQ6NT46 116 aa6.91□□□□□ -1.3
SRGAP1-205ENST00000542841 KRTAP9-6A0A140TA67 174 aa6.89□□□□□ -1.31
SRGAP1-205ENST00000542841 A0A1B0GW54 56 aa6.89□□□□□ -1.31
SRGAP1-205ENST00000542841 CCKP06307 115 aa6.89□□□□□ -1.31
SRGAP1-205ENST00000542841 Q6ZQT0 140 aa6.89□□□□□ -1.31
SRGAP1-205ENST00000542841 Q6JHZ5 121 aa6.88□□□□□ -1.31
SRGAP1-205ENST00000542841 C3orf22Q8N5N4 141 aa6.87□□□□□ -1.31
SRGAP1-205ENST00000542841 FAM229BQ4G0N7 80 aa6.86□□□□□ -1.31
SRGAP1-205ENST00000542841 A0A1B0GV72 72 aa6.85□□□□□ -1.31
SRGAP1-205ENST00000542841 Q6Q795 121 aa6.83□□□□□ -1.32
SRGAP1-205ENST00000542841 PRR26Q8N8Z3 221 aa6.83□□□□□ -1.32
SRGAP1-205ENST00000542841 Q8NBF4 154 aa6.83□□□□□ -1.32
SRGAP1-205ENST00000542841 FAT4Q6V0I7 4981 aa6.83□□□□□ -1.32
SRGAP1-205ENST00000542841 PRR4Q16378 134 aa6.82□□□□□ -1.32
SRGAP1-205ENST00000542841 IGFL1Q6UW32 110 aa6.81□□□□□ -1.32
SRGAP1-205ENST00000542841 LCE2AQ5TA79 106 aaPredicted RBP6.8□□□□□ -1.32
SRGAP1-205ENST00000542841 C9orf153Q5TBE3 101 aa6.8□□□□□ -1.32
SRGAP1-205ENST00000542841 SSBP3-AS1Q7Z2R9 100 aa6.8□□□□□ -1.32
SRGAP1-205ENST00000542841 IGLV9-49A0A0B4J1Y8 123 aa6.79□□□□□ -1.32
SRGAP1-205ENST00000542841 A0A1W2PNM2 257 aa6.79□□□□□ -1.32
SRGAP1-205ENST00000542841 KRTAP1-4P0C5Y4 121 aa6.79□□□□□ -1.32
SRGAP1-205ENST00000542841 CRYGAP11844 174 aa6.79□□□□□ -1.32
SRGAP1-205ENST00000542841 VPS25Q9BRG1 176 aa6.79□□□□□ -1.32
SRGAP1-205ENST00000542841 UBL5Q9BZL1 73 aa6.78□□□□□ -1.32
SRGAP1-205ENST00000542841 CDIP1Q9H305 208 aa6.78□□□□□ -1.32
SRGAP1-205ENST00000542841 MOBPQ13875 183 aa6.77□□□□□ -1.33
SRGAP1-205ENST00000542841 LINC00846Q9NV44 126 aa6.77□□□□□ -1.33
SRGAP1-205ENST00000542841 TRBV7-7A0A0K0K1E9 115 aa6.76□□□□□ -1.33
SRGAP1-205ENST00000542841 CD164Q04900 197 aa6.76□□□□□ -1.33
SRGAP1-205ENST00000542841 LINC00643Q86TS7 51 aa6.76□□□□□ -1.33
SRGAP1-205ENST00000542841 ANAPC11Q9NYG5 84 aa6.75□□□□□ -1.33
SRGAP1-205ENST00000542841 ATP5EP2Q5VTU8 51 aa6.74□□□□□ -1.33
SRGAP1-205ENST00000542841 A0A087X002 238 aa6.73□□□□□ -1.33
SRGAP1-205ENST00000542841 KRTAP13-2Q52LG2 175 aa6.72□□□□□ -1.33
SRGAP1-205ENST00000542841 Q6ZVQ6 151 aa6.72□□□□□ -1.33
SRGAP1-205ENST00000542841 SS18L2Q9UHA2 77 aa6.72□□□□□ -1.33
SRGAP1-205ENST00000542841 NREPQ16612 68 aa6.71□□□□□ -1.34
SRGAP1-205ENST00000542841 A0A087WSZ3 146 aa6.7□□□□□ -1.34
SRGAP1-205ENST00000542841 SIGMAR1Q99720 223 aa6.7□□□□□ -1.34
SRGAP1-205ENST00000542841 A0A0G2JQZ4 141 aa6.69□□□□□ -1.34
SRGAP1-205ENST00000542841 CXCL6P80162 114 aa6.69□□□□□ -1.34
SRGAP1-205ENST00000542841 TYMSOSQ8TAI1 123 aa6.69□□□□□ -1.34
SRGAP1-205ENST00000542841 IMUPQ9GZP8 106 aa6.68□□□□□ -1.34
SRGAP1-205ENST00000542841 RPS29P62273 56 aaKnown RBP6.67□□□□□ -1.34
SRGAP1-205ENST00000542841 Q5XG85 94 aa6.67□□□□□ -1.34
SRGAP1-205ENST00000542841 SPAG11AQ6PDA7 123 aa6.67□□□□□ -1.34
SRGAP1-205ENST00000542841 ASB16-AS1Q495Z4 193 aa6.66□□□□□ -1.34
SRGAP1-205ENST00000542841 MT-ATP8P03928 68 aa6.65□□□□□ -1.34
SRGAP1-205ENST00000542841 C4orf48Q5BLP8 95 aa6.65□□□□□ -1.34
SRGAP1-205ENST00000542841 LIMD2Q9BT23 127 aa6.65□□□□□ -1.34
SRGAP1-205ENST00000542841 J3KT08 172 aa6.64□□□□□ -1.35
SRGAP1-205ENST00000542841 BPY2O14599 106 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms