RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 PLAC8Q9NZF1 115 aa8.72□□□□□ -1.01
LDB3-207ENST00000542786 C3orf84H3BNL1 204 aa8.72□□□□□ -1.01
LDB3-207ENST00000542786 TGP01266 2768 aa8.71□□□□□ -1.02
LDB3-207ENST00000542786 UBE2AP49459 152 aa8.7□□□□□ -1.02
LDB3-207ENST00000542786 SCXQ7RTU7 201 aa8.7□□□□□ -1.02
LDB3-207ENST00000542786 IGFL1Q6UW32 110 aa8.7□□□□□ -1.02
LDB3-207ENST00000542786 IGLV5-52A0A0A0MRZ9 124 aa8.69□□□□□ -1.02
LDB3-207ENST00000542786 CRYGAP11844 174 aa8.69□□□□□ -1.02
LDB3-207ENST00000542786 A0A0G2JQZ4 141 aa8.68□□□□□ -1.02
LDB3-207ENST00000542786 NREPQ16612 68 aa8.68□□□□□ -1.02
LDB3-207ENST00000542786 DPH3Q96FX2 82 aa8.68□□□□□ -1.02
LDB3-207ENST00000542786 F8WEM9 126 aa8.68□□□□□ -1.02
LDB3-207ENST00000542786 COX7CP15954 63 aa8.68□□□□□ -1.02
LDB3-207ENST00000542786 UQCRQO14949 82 aa8.67□□□□□ -1.02
LDB3-207ENST00000542786 IGKV4-1P06312 121 aa8.66□□□□□ -1.02
LDB3-207ENST00000542786 SERP2Q8N6R1 65 aa8.66□□□□□ -1.02
LDB3-207ENST00000542786 SRRM2Q9UQ35 2752 aaKnown RBP8.65□□□□□ -1.03
LDB3-207ENST00000542786 PSORS1C2Q9UIG4 136 aa8.64□□□□□ -1.03
LDB3-207ENST00000542786 KRTAP10-2P60368 255 aa8.64□□□□□ -1.03
LDB3-207ENST00000542786 Q8N9L7 120 aa8.63□□□□□ -1.03
LDB3-207ENST00000542786 BPY2O14599 106 aa8.62□□□□□ -1.03
LDB3-207ENST00000542786 LINC00483Q53H64 154 aa8.62□□□□□ -1.03
LDB3-207ENST00000542786 DNAH11Q96DT5 4516 aa8.6□□□□□ -1.03
LDB3-207ENST00000542786 C9orf153Q5TBE3 101 aa8.6□□□□□ -1.03
LDB3-207ENST00000542786 FRAS1Q86XX4 4008 aa8.59□□□□□ -1.03
LDB3-207ENST00000542786 DSCR10P59022 87 aa8.59□□□□□ -1.03
LDB3-207ENST00000542786 FAM30AQ9NZY2 134 aa8.58□□□□□ -1.04
LDB3-207ENST00000542786 DNAH8Q96JB1 4490 aa8.57□□□□□ -1.04
LDB3-207ENST00000542786 ZNF861PO60384 105 aa8.57□□□□□ -1.04
LDB3-207ENST00000542786 CYSTM1Q9H1C7 97 aa8.57□□□□□ -1.04
LDB3-207ENST00000542786 A0A087WSZ3 146 aa8.56□□□□□ -1.04
LDB3-207ENST00000542786 Q6ZSA8 131 aa8.56□□□□□ -1.04
LDB3-207ENST00000542786 TRAV7A0A075B6U4 112 aa8.55□□□□□ -1.04
LDB3-207ENST00000542786 DNAH5Q8TE73 4624 aa8.54□□□□□ -1.04
LDB3-207ENST00000542786 SMIM20Q8N5G0 67 aa8.53□□□□□ -1.04
LDB3-207ENST00000542786 CIRBP-AS1Q8TBR5 109 aa8.53□□□□□ -1.04
LDB3-207ENST00000542786 ZNF706Q9Y5V0 76 aaPredicted RBP8.53□□□□□ -1.04
LDB3-207ENST00000542786 KRTAP10-1P60331 282 aa8.53□□□□□ -1.04
LDB3-207ENST00000542786 SS18L2Q9UHA2 77 aa8.53□□□□□ -1.04
LDB3-207ENST00000542786 FAT2Q9NYQ8 4349 aa8.53□□□□□ -1.04
LDB3-207ENST00000542786 IGLV7-43P04211 117 aa8.52□□□□□ -1.05
LDB3-207ENST00000542786 K7EQZ3 153 aa8.51□□□□□ -1.05
LDB3-207ENST00000542786 PKD1P98161 4303 aa8.51□□□□□ -1.05
LDB3-207ENST00000542786 RPL37AP61513 92 aaKnown RBP8.49□□□□□ -1.05
LDB3-207ENST00000542786 OCR1Q9BZK8 76 aa8.49□□□□□ -1.05
LDB3-207ENST00000542786 LINC00472Q9H8W2 130 aa8.49□□□□□ -1.05
LDB3-207ENST00000542786 IGLV9-49A0A0B4J1Y8 123 aa8.48□□□□□ -1.05
LDB3-207ENST00000542786 ANAPC11Q9NYG5 84 aa8.47□□□□□ -1.05
LDB3-207ENST00000542786 HYDINQ4G0P3 5121 aa8.47□□□□□ -1.05
LDB3-207ENST00000542786 DEFB116Q30KQ4 102 aa8.47□□□□□ -1.05
LDB3-207ENST00000542786 C20orf197Q8N268 126 aa8.45□□□□□ -1.06
LDB3-207ENST00000542786 MOBPQ13875 183 aa8.44□□□□□ -1.06
LDB3-207ENST00000542786 Q96NJ1 140 aa8.43□□□□□ -1.06
LDB3-207ENST00000542786 KLKP1Q107X0 134 aa8.43□□□□□ -1.06
LDB3-207ENST00000542786 HCG22E2RYF7 251 aa8.41□□□□□ -1.06
LDB3-207ENST00000542786 LCE6AA0A183 80 aa8.4□□□□□ -1.07
LDB3-207ENST00000542786 A8MWP4 228 aa8.4□□□□□ -1.07
LDB3-207ENST00000542786 KRTAP29-1A8MX34 341 aaPredicted RBP8.4□□□□□ -1.07
LDB3-207ENST00000542786 PRR15Q8IV56 129 aa8.4□□□□□ -1.07
LDB3-207ENST00000542786 SACSQ9NZJ4 4579 aa8.39□□□□□ -1.07
LDB3-207ENST00000542786 TMEM258P61165 79 aa8.39□□□□□ -1.07
LDB3-207ENST00000542786 LRP1BQ9NZR2 4599 aa8.37□□□□□ -1.07
LDB3-207ENST00000542786 H7BZZ5 65 aa8.37□□□□□ -1.07
LDB3-207ENST00000542786 J3KT08 172 aa8.36□□□□□ -1.07
LDB3-207ENST00000542786 SNURFQ9Y675 71 aa8.36□□□□□ -1.07
LDB3-207ENST00000542786 HRCT1Q6UXD1 115 aa8.36□□□□□ -1.07
LDB3-207ENST00000542786 TMEM254Q8TBM7 123 aa8.36□□□□□ -1.07
LDB3-207ENST00000542786 A0A0U1RQV1 116 aa8.35□□□□□ -1.07
LDB3-207ENST00000542786 A0A1B0GVY2 172 aa8.33□□□□□ -1.08
LDB3-207ENST00000542786 WFDC13Q8IUB5 93 aa8.33□□□□□ -1.08
LDB3-207ENST00000542786 LINC00336Q6ZUF6 198 aa8.32□□□□□ -1.08
LDB3-207ENST00000542786 MMP24-AS1A0A0U1RRL7 71 aa8.32□□□□□ -1.08
LDB3-207ENST00000542786 CD164Q04900 197 aa8.32□□□□□ -1.08
LDB3-207ENST00000542786 SSBP3-AS1Q7Z2R9 100 aa8.32□□□□□ -1.08
LDB3-207ENST00000542786 A0A087X002 238 aa8.31□□□□□ -1.08
LDB3-207ENST00000542786 KRTAP1-4P0C5Y4 121 aa8.31□□□□□ -1.08
LDB3-207ENST00000542786 KRTAP13-2Q52LG2 175 aa8.31□□□□□ -1.08
LDB3-207ENST00000542786 ASB16-AS1Q495Z4 193 aa8.3□□□□□ -1.08
LDB3-207ENST00000542786 FAM229BQ4G0N7 80 aa8.3□□□□□ -1.08
LDB3-207ENST00000542786 CASC2Q6XLA1 102 aa8.3□□□□□ -1.08
LDB3-207ENST00000542786 ZCCHC13Q8WW36 166 aaKnown RBP8.28□□□□□ -1.08
LDB3-207ENST00000542786 NDUFC1O43677 76 aa8.28□□□□□ -1.08
LDB3-207ENST00000542786 NDUFB1O75438 58 aa8.26□□□□□ -1.09
LDB3-207ENST00000542786 FAM236DA0A1B0GTK5 79 aa8.25□□□□□ -1.09
LDB3-207ENST00000542786 A0A1B0GVX0 72 aa8.25□□□□□ -1.09
LDB3-207ENST00000542786 FAM236CP0DP71 79 aa8.25□□□□□ -1.09
LDB3-207ENST00000542786 RPS28P62857 69 aaKnown RBP8.25□□□□□ -1.09
LDB3-207ENST00000542786 PKHD1P08F94 4074 aa8.24□□□□□ -1.09
LDB3-207ENST00000542786 C5orf47Q569G3 176 aa8.24□□□□□ -1.09
LDB3-207ENST00000542786 C8orf17Q9NRJ1 99 aa8.23□□□□□ -1.09
LDB3-207ENST00000542786 RYR2Q92736 4967 aa8.23□□□□□ -1.09
LDB3-207ENST00000542786 DYNC1H1Q14204 4646 aaKnown RBP8.22□□□□□ -1.09
LDB3-207ENST00000542786 OXTP01178 125 aa8.22□□□□□ -1.09
LDB3-207ENST00000542786 KMT2CQ8NEZ4 4911 aaKnown RBP8.22□□□□□ -1.09
LDB3-207ENST00000542786 hDV103S1A0JD37 113 aa8.21□□□□□ -1.09
LDB3-207ENST00000542786 Q5XG85 94 aa8.21□□□□□ -1.09
LDB3-207ENST00000542786 VPS13BQ7Z7G8 4022 aa8.21□□□□□ -1.09
LDB3-207ENST00000542786 NOTCH2NLQ7Z3S9 236 aa8.2□□□□□ -1.1
LDB3-207ENST00000542786 IGHV6-1A0A0B4J1U7 121 aa8.19□□□□□ -1.1
LDB3-207ENST00000542786 KRTAP10-4P60372 401 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms